Kim Sneppen
Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- Published
Time walkers and spatial dynamics of ageing information
Lizana, G. L., Rosvall, M. & Sneppen, Kim, 29 Jan 2010, In: Physical Review Letters. 104, 4, p. 040603 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Exploring the Link between Nucleosome Occupancy and DNA Methylation
Lövkvist, Cecilia, Sneppen, Kim & Härter, Jan Olaf Mirko, 12 Jan 2018, In: Frontiers in Genetics. 8, 7 p., 232.Research output: Contribution to journal › Journal article › Research › peer-review
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DNA methylation in human epigenomes depends on local topology of CpG sites
Lövkvist, Cecilia, Dodd, I. B., Sneppen, Kim & Härter, Jan Olaf Mirko, 20 Jun 2016, In: Nucleic Acids Research. 44, 11, p. 5123-5132Research output: Contribution to journal › Journal article › Research › peer-review
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From kill the winner to eliminate the winner in open phage-bacteria systems
Marantos, Anastasios, Mitarai, Namiko & Sneppen, Kim, 8 Aug 2022, In: PLOS Computational Biology. 18, 8, 15 p., e1010400.Research output: Contribution to journal › Journal article › Research › peer-review
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Spreading out of perturbations in reversible reaction networks
Maslov, S., Sneppen, Kim & Ispolatov, I., 2007, In: New Journal of Physics. 9, 273Research output: Contribution to journal › Journal article › Research › peer-review
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Regime Shifts in a Phage-Bacterium Ecosystem and Strategies for Its Control
Maslov, S. & Sneppen, Kim, 1 Nov 2019, In: mSystems. 5, 4(6), e00470-19.Research output: Contribution to journal › Journal article › Research › peer-review
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Computational architecture of the yeast regulatory network: Workshop on Flexibility in Biomolecules, MAY 15-18, 2005 Tempe, AZ
Maslov, S. & Sneppen, Kim, 2005, In: Physical Biology. 2, 4, Sp. iss. Sl, p. S94-S100Research output: Contribution to journal › Journal article › Research › peer-review
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Diversity Waves in Collapse-Driven Population Dynamics
Maslov, S. & Sneppen, Kim, 1 Sep 2015, In: P L o S One. 11, 9, e1004440.Research output: Contribution to journal › Journal article › Research › peer-review
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Well-temperate phage: optimal bet-hedging against local environmental collapses
Maslov, S. & Sneppen, Kim, 2 Jun 2015, In: Scientific Reports. 5, 10523.Research output: Contribution to journal › Journal article › Research › peer-review
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Toolbox model of evolution of prokaryotic metabolic networks and their regulation
Maslov, S., Krishna, S., Pang, T. Y. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 24, p. 9743-9748 5 p.Research output: Contribution to journal › Conference article › Research › peer-review
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Population cycles and species diversity in dynamic Kill-the-Winner model of microbial ecosystems
Maslov, S. & Sneppen, Kim, 4 Jan 2017, In: Scientific Reports. 7, 39642.Research output: Contribution to journal › Journal article › Research › peer-review
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Severe population collapses and species extinctions in multihost epidemic dynamics
Maslov, S. & Sneppen, Kim, 22 Aug 2017, In: Physical Review E. 96, 2, 022412.Research output: Contribution to journal › Journal article › Research › peer-review
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Upstream plasticity and downstream robustness in evolution of molecular networks
Maslov, S., Sneppen, Kim, Astrup Eriksen, K. & Yan, K., 2004, In: BMC Evolutionary Biology. 4, p. 9-Research output: Contribution to journal › Journal article › Research › peer-review
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Organizational structure and communication networks in a university environment
Mathiesen, Joachim, Jamtveit, B. & Sneppen, Kim, 2 Jul 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 82, 1, p. 016104 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Ecosystems with Mutually Exclusive Interactions Self-Organize to a State of High Diversity
Mathiesen, Joachim, Mitarai, Namiko, Sneppen, Kim & Trusina, Ala, 25 Oct 2011, In: Physical Review Letters. 107, 18, p. 188101Research output: Contribution to journal › Journal article › Research › peer-review
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Robustness of the Right Operator in Bacteriophage µ
Metzler, R., Bakk, A. & Sneppen, Kim, 2004, In: Biophysical Journal. 86, p. 58-66Research output: Contribution to journal › Journal article › Research › peer-review
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Theory for the stability and regulation of epigenetic landscapes
Micheelsen, M. A., Mitarai, Namiko, Sneppen, Kim & Dodd, I. B., 4 Jun 2010, In: Physical Biology. 7, 2, p. 026010 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Self-organization of structures and networks from merging and small-scale fluctuations
Minnhagen, P., Rosvall, M., Sneppen, Kim & Trusina, Ala, 15 Sep 2004, In: Physica A: Statistical Mechanics and its Applications. 340, 4, p. 725-732Research output: Contribution to journal › Journal article › Research › peer-review
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The generation of promoter-mediated transcriptional noise in bacteria
Mitarai, Namiko, Dodd, I. B., Crooks, M. T. & Sneppen, Kim, 11 Jul 2008, In: PLoS Computational Biology. 4, 7, p. e 10000109Research output: Contribution to journal › Journal article › Research › peer-review
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Emergence of diversity in a model ecosystem
Mitarai, Namiko, Mathiesen, Joachim & Sneppen, Kim, 30 Jul 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 86, 1, p. 011929 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Benjamin, J. M., Krishna, S., Semsey, S., Csiszovszki, Z., Massé, E. & Sneppen, Kim, 30 Jun 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 26, p. 10655-9 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Three is much more than two in coarsening dynamics of cyclic competitions
Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Sustainable diversity of phage-bacteria systems
Mitarai, Namiko, Marantos, Anastasios & Sneppen, Kim, 1 Jun 2023, In: Current Opinion in Systems Biology. 35, 6 p., 100468.Research output: Contribution to journal › Review › Research › peer-review
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Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage lambda and Escherichia coli
Mitarai, Namiko, Brown, Stanley & Sneppen, Kim, 11 Apr 2016, In: Journal of Bacteriology. 198, 12, p. 1783-1793Research output: Contribution to journal › Journal article › Research › peer-review
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Efficient degradation and expression prioritization with small RANs
Mitarai, Namiko, Andersson, A. M. C., Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Physical Biology. 4, 3, p. 164-171Research output: Contribution to journal › Journal article › Research › peer-review
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Speciation, diversification, and coexistence of sessile species that compete for space
Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665Research output: Contribution to journal › Journal article › Research › peer-review
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Ribosome collisions and Translation efficiency: Optimization by codon usage and mRNA destabilization
Mitarai, Namiko, Sneppen, Kim & Pedersen, Steen, 2008, In: Journal of Molecular Biology. 382, 1, p. 236-245 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity
Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamical analysis on gene activity in the presence of repressors and an interfering promoter
Nakanishi, H., Mitarai, Namiko & Sneppen, Kim, 1 Nov 2008, In: Biophysical Journal. 95, 9, p. 4228-4240Research output: Contribution to journal › Journal article › Research › peer-review
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Establishment of heterochromatin in domain-size-dependent bursts
Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.Research output: Contribution to journal › Journal article › Research › peer-review
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The transcription factor Atf1 lowers the transition barrier for nucleosome-mediated establishment of heterochromatin
Nickels, Jan Fabio, Della-Rosa, M. E., Miguelez Goyeneche, I., Charlton, Sebastian Jespersen, Sneppen, Kim & Thon, Genevieve, 2022, In: Cell Reports. 39, 7, 17 p., 110828.Research output: Contribution to journal › Journal article › Research › peer-review
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Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2
Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.Research output: Contribution to journal › Journal article › Research › peer-review
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Differences in social activity increase efficiency of contact tracing
Nielsen, Bjarke Frost, Sneppen, Kim, Simonsen, L. & Mathiesen, Joachim, 2 Oct 2021, In: European Physical Journal B. 94, 10, 11 p., 209.Research output: Contribution to journal › Journal article › Research › peer-review
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Model to Link Cell Shape and Polarity with Organogenesis
Nielsen, Bjarke Frost, Nissen, Silas Boye, Sneppen, Kim, Mathiesen, Joachim & Trusina, Ala, 10 Jan 2020, In: iScience. 23, 2, p. 1-10 10 p., 100830.Research output: Contribution to journal › Journal article › Research › peer-review
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Lockdowns exert selection pressure on overdispersion of SARS-CoV-2 variants
Nielsen, Bjarke Frost, Eilersen, Andreas Thomas, Simonsen, L. & Sneppen, Kim, 2 Sep 2022, In: Epidemics. 40, 7 p., 100613.Research output: Contribution to journal › Journal article › Research › peer-review
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COVID-19 superspreading suggests mitigation by social network modulation
Nielsen, Bjarke Frost, Simonsen, L. & Sneppen, Kim, 15 Mar 2021, In: Physical Review Letters. 126, 6 p., 118301.Research output: Contribution to journal › Letter › Research › peer-review
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The counterintuitive implications of superspreading diseases
Nielsen, B. F., Sneppen, Kim & Simonsen, L., 31 Oct 2023, In: Nature Communications. 14, 1, 3 p., 6954.Research output: Contribution to journal › Journal article › Research › peer-review
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Four simple rules that are sufficient to generate the mammalian blastocyst
Nissen, Silas Boye, Perera Pérez, Marta, Martin Gonzalez, Javier, Morgani, S. M. C., Jensen, Mogens Høgh, Sneppen, Kim, Brickman, Joshua Mark & Trusina, Ala, 12 Jul 2017, In: PLOS Biology. 15, 7, p. 1-30 e2000737.Research output: Contribution to journal › Journal article › Research › peer-review
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Theoretical tool bridging cell polarities with development of robust morphologies
Nissen, Silas Boye, Rønhild, S., Trusina, Ala & Sneppen, Kim, 27 Nov 2018, In: eLife. 7, 25 p., e38407.Research output: Contribution to journal › Journal article › Research › peer-review
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Effect of supercoiling on the λ switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 1 Jan 2014, In: Bacteriophage. 4, 2, p. 1-5 5 p., e27517.Research output: Contribution to journal › Journal article › Research › peer-review
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DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Nucleation and spreading of a heterochromatic domain in fission yeast
Obersriebnig, M. J., Pallesen, E. M. H., Sneppen, Kim, Trusina, Ala & Thon, Genevieve, 2016, In: Nature Communications. 7, 11 p., 11518.Research output: Contribution to journal › Journal article › Research › peer-review
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Nanog, Oct4 and Tet1 interplay in establishing pluripotency
Olariu, V., Lövkvist, Cecilia & Sneppen, Kim, 5 May 2016, In: Scientific Reports. 6, 25438.Research output: Contribution to journal › Journal article › Research › peer-review
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Repression of the lysogenic PR promoter in bacteriophage TP901-1 through binding of a CI-MOR complex to a composite OM-OR operator
Pedersen, M., Neergaard, J. T., Cassias, J., Rasmussen, K. K., Lo Leggio, Leila, Sneppen, Kim, Hammer, K. & Kilstrup, M., 26 May 2020, In: Scientific Reports. 10, 1, 13 p., 8659.Research output: Contribution to journal › Journal article › Research › peer-review
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Pedersen, M., Nissen, S., Mitarai, Namiko, Svenningsen, Sine Lo, Sneppen, Kim & Pedersen, Steen, 2011, In: Journal of Molecular Biology. 407, 1, p. 35-44 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Fast Translation within the First 45 Codons Decreases mRNA Stability and Increases Premature Transcription Termination in E. coli
Pedersen, Steen, Terkelsen, Thilde Bagger, Eriksen, M., Hauge, M. K., Lund, C. C., Sneppen, Kim & Mitarai, Namiko, 2019, In: Journal of Molecular Biology. 431, 6, p. 1088-1097 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Quality control system response to stochastic growth of amyloid fibrils
Pigolotti, S., Lizana, L., Sneppen, Kim & Otzen, D., 2 May 2013, In: F E B S Letters. 587, 9, p. 1405-1410 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations
Ping, D., Wang, T., Fraebel, D. T., Maslov, S., Sneppen, Kim & Kuehn, S., 1 Aug 2020, In: ISME Journal. 14, 8, p. 2007-2018 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Pancreatic alpha and beta cells are globally phase-locked
Ren, H., Li, Y., Han, C., Yu, Y., Shi, B., Peng, X., Wu, S., Yang, X., Sneppen, Kim, Chen, L., Tang, C. & Zhang, T., 28 Jun 2022, In: Nature Communications. 13, 1, 16 p., 3721.Research output: Contribution to journal › Journal article › Research › peer-review
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Networks and Cities: An Information Perspective
Rosvall, M., Trusina, Ala, Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review Letters. 94, 2, 028701.Research output: Contribution to journal › Journal article › Research › peer-review
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Searchability of networks
Rosvall, M., Grönlund, A., Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 72, p. 046117Research output: Contribution to journal › Journal article › Research
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Navigating netwoks with limited information
Rosvall, M., Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 71, 6, p. 066111Research output: Contribution to journal › Journal article › Research › peer-review
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Networks and our limited information horizon
Rosvall, M. & Sneppen, Kim, 2007, In: International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 17, 7, p. 2509-2515Research output: Contribution to journal › Journal article › Research › peer-review
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Reinforced communication and social navigation generate groups in model networks
Rosvall, M. & Sneppen, Kim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 2, Part 2, p. 026111Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling self-organization of communication and topology in social networks
Rosvall, M. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 1, p. 016108Research output: Contribution to journal › Journal article › Research › peer-review
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Self-assembly of information in networks
Rosvall, M. & Sneppen, Kim, 2006, In: EPL. 74, 6, p. 1109-1115Research output: Contribution to journal › Journal article › Research › peer-review
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Network models of phage-bacteria coevolution
Rosvall, M., Dodd, I. B., Krishna, S. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 6, p. 066105Research output: Contribution to journal › Journal article › Research › peer-review
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Morphological Instabilities in a growing Yeast Colony: Experiment and Theory
Sams, T., Jensen, Mogens Høgh, Sneppen, Kim, Christensen, B., Ellegaard, Clive Sigurd & Thrane, U., 14 Jul 1997, In: Physical Review Letters. 79, 2, p. 313-316Research output: Contribution to journal › Journal article › Research
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Dominant negative autoregulation limits steady-state repression levels in gene networks
Semsey, S., Krishna, S., Erdossy, J., Horvath, P., Orosz, L., Sneppen, Kim & Adhya, S., 2009, In: Journal of Bacteriology. 191, 14, p. 4487-4491 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic regulation of fluxes: iron homeostasis escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-4967Research output: Contribution to journal › Journal article › Research › peer-review
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Signal integration in the galactose network of Escherichia coli
Semsey, S., Krishna, S., Sneppen, Kim & Adhya, S., 2007, In: Molecular Microbiology. 65, 2, p. 465-476Research output: Contribution to journal › Journal article › Research › peer-review
Dominant negative autoregulation limits steady-state repression levels in gene networks
Semsey, S., Krishna, S., Erdossy, J., Horváth, P., Orosz, L., Sneppen, Kim & Adhya, S., Jul 2009, In: Journal of Bacteriology. 191, 14, p. 4487-91 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
Genetic regulation of fluxes: iron homeostasis of Escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-7 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamics of the recovery from sRNA-mediated gene silencing
Semsey, S., Bemjamin, J., Mitarai, Namiko, Krishna, S., Csiszovszki, Z., Sneppen, Kim & Masse, E., 2009, In: Cell Cycle. 8, 18, p. 2863-2864 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Fear and its implications for stock markets
Simonsen, I., Ahlgren, P. H., Jensen, Mogens Høgh, Danangelo, R. & Sneppen, Kim, 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 2, p. 153-158Research output: Contribution to journal › Journal article › Research › peer-review
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Epigenetic switching with asymmetric bridging interactions
Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Hide-and-seek on complex networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Mar 2005, In: EPL. 69, 5, p. 853-859Research output: Contribution to journal › Journal article › Research › peer-review
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Measuring information networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Jun 2005, In: Pramana – Journal of Physics. 64, 6, p. 1121-1125Research output: Contribution to journal › Journal article › Research › peer-review
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Structure and communication in complex networks
Sneppen, Kim, 2006, In: NATO Science Series : Sub Series III, Computer and sytems sciences. p. 1-28Research output: Contribution to journal › Conference article › Research › peer-review
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A communication perspective on network topologies
Sneppen, Kim & Rosvall, M., 2006, In: Progress of Theoretical Physics. Supplement. p. 103-118Research output: Contribution to journal › Conference article › Research › peer-review
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Epigenetics as a first exit problem
Sneppen, Kim & Aurell, E., 2002, In: Physical Review Letters. 88, 4, p. 048101 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A minimal model for multiple epidemics and immunity spreading
Sneppen, Kim, Trusina, Ala, Jensen, Mogens Høgh & Bornholdt, S., 18 Oct 2010, In: PLoS ONE. 5, 10, p. e13326Research output: Contribution to journal › Journal article › Research › peer-review
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Economy of operon formation: cotranscription minimizes shortfall in protein complexes
Sneppen, Kim, Pedersen, Steen, Krishna, S., Dodd, I. B. & Semsey, S., 21 Sep 2010, In: Microbe. 1, 4, p. e00177-10Research output: Contribution to journal › Journal article › Research › peer-review
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Specificity and Stability in Topology of Protein Networks
Sneppen, Kim, 2002, In: Kexue (Shanghai). vol. 296, p. 910-256Research output: Contribution to journal › Journal article › Research › peer-review
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Scaling in fracture and refreezing of sea ice
Sneppen, Kim & Hansen, A. G., 2004, In: Physica A: Statistical Mechanics and its Applications. 331, p. 291-296Research output: Contribution to journal › Journal article › Research › peer-review
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Hierarchy and anti-hierarchy in real and scale free networks
Sneppen, Kim & Minnhagen, P., 2004, In: Physical Review Letters. 92, p. 178702Research output: Contribution to journal › Journal article › Research › peer-review
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Globalization in a nutshell
Sneppen, Kim & Bornholdt, S., 29 Oct 2018, In: Physical Review E. 98, 4, 6 p., 022314.Research output: Contribution to journal › Journal article › Research › peer-review
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Models of life: Dynamics and regulation in biological systems
Sneppen, Kim, 5 Oct 2014, Cambridge University Press ed. Cambridge. 342 p.Research output: Book/Report › Book › Research › peer-review
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Theoretical analysis of Polycomb-Trithorax systems predicts that poised chromatin is bistable and not bivalent
Sneppen, Kim & Ringrose, L., 13 May 2019, In: Nature Communications. 10, 18 p., 2133.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Overdispersion in COVID-19 increases the effectiveness of limiting nonrepetitive contacts for transmission control
Sneppen, Kim, Nielsen, Bjarke Frost, Taylor, R. J. & Simonsen, L., 6 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 14, 6 p., 2016623118.Research output: Contribution to journal › Journal article › Research › peer-review
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Nucleosome dynamics and maintenance of epigenetic states of CpG islands
Sneppen, Kim & Dodd, I. B., 28 Jun 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 6, 062417.Research output: Contribution to journal › Journal article › Research › peer-review
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Stability Puzzles in λ Phage
Sneppen, Kim, 2002, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). vol. E 65, p. 051914Research output: Contribution to journal › Journal article › Research › peer-review
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Profit Profiles in Correlated Markets
Sneppen, Kim, 2002, In: Physica B: Condensed Matter. vol. A 316, p. 561-567Research output: Contribution to journal › Journal article › Research › peer-review
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Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae
Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302Research output: Contribution to journal › Journal article › Research › peer-review
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A Mathematical Model for Transcriptional Interfernce by RNA Polymerase Traffic in Escherichia coli
Sneppen, Kim, Dodd, J., Shearwin, K., Palmer, A., Schubert, R., Callen, B. & Egan, B., 2005, In: Journal of Molecular Biology. 346, 2, p. 399-409Research output: Contribution to journal › Journal article › Research › peer-review
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Models of life: epigenetics, diversity and cycles
Sneppen, Kim, 1 Apr 2017, In: Reports on Progress in Physics. 80, 4, 042601.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Communication boundaries in networks
Sneppen, Kim, Rosvall, M. & Trussina, A., 2005, In: Physical Review Letters. 94, 23, p. 238701Research output: Contribution to journal › Journal article › Research › peer-review
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Ultrasensitive gene regulation by positive feedback loops in nucleosome modification
Sneppen, Kim, Micheelsen, M. A. & Dodd, I. B., 15 Apr 2008, In: Molecular Systems Biology. 4, p. 182Research output: Contribution to journal › Journal article › Research › peer-review
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Diffusion on complex networks: a way to probe their large-scale topological structures
Sneppen, Kim, Simonsen, I. & Eriksen, K., 2004, In: Physica A: Statistical Mechanics and its Applications. 336, p. 163-173Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Restriction modification systems as engines of diversity
Sneppen, Kim, Semsey, S., Seshasayee, A. S. N. & Krishna, S., 2 Jun 2015, In: Frontiers in Microbiology. 6, 528.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simple model for self organization of bipartite networks
Sneppen, Kim, Rosvall, M., Trusina, A. & Minnhagen, P., 2004, In: EPL. 67, 3, p. 349-354Research output: Contribution to journal › Journal article › Research › peer-review
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Protein Interaction Networks Beyond Artifacts
Sneppen, Kim, 2002, In: FEBS. vol. 530, p. 255-256Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome
Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multistability with a Metastable Mixed State
Sneppen, Kim & Mitarai, Namiko, 5 Sep 2012, In: Physical Review Letters. 109, 10, p. 100602 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simple histone code opens many paths to epigenetics
Sneppen, Kim & Dodd, I. B., 2012, In: P L o S Computational Biology. 8, 8, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variability alignment identifies functional regions in tubulin paralogs
Sneppen, Kim, 2004, In: Protein Science. 13, p. 25-31Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physics in Molecular Biology
Sneppen, Kim & Zocchi, G., 2005, UK: Cambridge University Press. 319 p.Research output: Book/Report › Book › Research
- Published
Detection in complex networks: correlation profile of the internet
Sneppen, Kim, Maslov, S. & Zalizynak, A., 2004, In: Physica A: Statistical Mechanics and its Applications. 333, p. 529-540Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling proteasome dynamics in Parkinson's disease
Sneppen, Kim, Lizana, G. L., Jensen, Mogens Høgh, Pigolotti, S. & Otzen, D., 2009, In: Physical Biology. 6, 3, p. 036005Research output: Contribution to journal › Journal article › Research › peer-review
ID: 10093
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Direct and indirect effects in the regulation of overlapping promoters
Research output: Contribution to journal › Journal article › Research › peer-review
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2177
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Single-cell Analysis of Lambda Immunity Regulation
Research output: Contribution to journal › Journal article › Research › peer-review
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1921
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published