Kim Sneppen
Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- Published
Network models of phage-bacteria coevolution
Rosvall, M., Dodd, I. B., Krishna, S. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 6, p. 066105Research output: Contribution to journal › Journal article › Research › peer-review
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Need, greed and noise: competing strategies and in a trading model
Donangelo, R., Hansen, A., Sneppen, Kim & Souza, S. R., 2005, In: Physica A: Statistical Mechanics and its Applications. 348, p. 496-504Research output: Contribution to journal › Journal article › Research › peer-review
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Navigating netwoks with limited information
Rosvall, M., Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 71, 6, p. 066111Research output: Contribution to journal › Journal article › Research › peer-review
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Nanog, Oct4 and Tet1 interplay in establishing pluripotency
Olariu, V., Lövkvist, Cecilia & Sneppen, Kim, 5 May 2016, In: Scientific Reports. 6, 25438.Research output: Contribution to journal › Journal article › Research › peer-review
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Multistability with a Metastable Mixed State
Sneppen, Kim & Mitarai, Namiko, 5 Sep 2012, In: Physical Review Letters. 109, 10, p. 100602 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Multi stability and global bifurcations in epidemic model with distributed delay SIRnS-model
Jensen, G. G., Uekermann, F. & Sneppen, Kim, 1 Feb 2019, In: European Physical Journal B. 92, 2, 28.Research output: Contribution to journal › Journal article › Research › peer-review
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Morphological Instabilities in a growing Yeast Colony: Experiment and Theory
Sams, T., Jensen, Mogens Høgh, Sneppen, Kim, Christensen, B., Ellegaard, Clive Sigurd & Thrane, U., 14 Jul 1997, In: Physical Review Letters. 79, 2, p. 313-316Research output: Contribution to journal › Journal article › Research
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Models of life: epigenetics, diversity and cycles
Sneppen, Kim, 1 Apr 2017, In: Reports on Progress in Physics. 80, 4, 042601.Research output: Contribution to journal › Journal article › Research › peer-review
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Models of life: Dynamics and regulation in biological systems
Sneppen, Kim, 5 Oct 2014, Cambridge University Press ed. Cambridge. 342 p.Research output: Book/Report › Book › peer-review
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Modelling value bubbles in an attention based economy
Toftdahl Olesen, C. & Sneppen, Kim, 2 Mar 2020, In: European Physical Journal B. 93, 3, 5 p., 36.Research output: Contribution to journal › Journal article › Research › peer-review
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Modelling transcriptional interference and DNA looping in gene regulation
Dodd, I. B., Shearwin, K. & Sneppen, Kim, 2007, In: Journal of Molecular Biology. 369, 5, p. 1200-1213Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling the two-hybrid detector: Experimental bias on protien interaction networks
Stibius, K. & Sneppen, Kim, 2007, In: Biophysical Journal. 93, 7, p. 2562-2566Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling the spatial dynamics of culture spreading in the presence of cultural strongholds
Lizana, G. L., Mitarai, Namiko & Sneppen, Kim, 28 Jun 2011, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 83, 6, p. 066116 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling self-organization of communication and topology in social networks
Rosvall, M. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 1, p. 016108Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling rises and falls in money addicted social hierarchies
Dybiec, B., Mitarai, Namiko & Sneppen, Kim, 2014, In: Physica Scripta. 89, 8, 085002.Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling proteasome dynamics in Parkinson's disease
Sneppen, Kim, Lizana, G. L., Jensen, Mogens Høgh, Pigolotti, S. & Otzen, D., 2009, In: Physical Biology. 6, 3, p. 036005Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling of the genetic switch of bacteriophage TP901-1: a heteromer of CI and MOR ensures robust bistability
Hiizu, N., Pedersen, M., Alsing, A. & Sneppen, Kim, 2009, In: Journal of Molecular Biology. 394, p. 15-28 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Model to Link Cell Shape and Polarity with Organogenesis
Nielsen, Bjarke Frost, Nissen, Silas Boye, Sneppen, Kim, Mathiesen, Joachim & Trusina, Ala, 10 Jan 2020, In: iScience. 23, 2, p. 1-10 10 p., 100830.Research output: Contribution to journal › Journal article › Research › peer-review
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Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome
Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.Research output: Contribution to journal › Journal article › Research › peer-review
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Minimal model of spiky oscillations in NF-kB signaling
Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2006, In: Proceedings of the National Academy of Science of the United States of America. 103, 4, p. 10840-10845Research output: Contribution to journal › Journal article › Research › peer-review
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Minimal gene regulatory circuits for a lysis-lysogeny choice in the presence of noise
Avlund, M., Krishna, S., Semsey, S., Dodd, I. B. & Sneppen, Kim, 20 Dec 2010, In: PLoS ONE. 5, 12, p. 0015037 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Minimal Gene Regulatory Circuits that Can Count like Bacteriophage Lambda
Avlund, M., Dodd, I. B., Sneppen, Kim & Krishna, S., 11 Dec 2009, In: Journal of Molecular Biology. 394, 4, p. 681-693Research output: Contribution to journal › Journal article › Research › peer-review
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Measuring information networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Jun 2005, In: Pramana – Journal of Physics. 64, 6, p. 1121-1125Research output: Contribution to journal › Journal article › Research › peer-review
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Longevity of orders in related to the longevity of their constituent genera rather then genus richness
Bornholdt, S., Sneppen, Kim & Westphal, H., 2006, In: Theory in Biosciences. 128, 2, p. 75-83 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Lockdowns exert selection pressure on overdispersion of SARS-CoV-2 variants
Nielsen, Bjarke Frost, Eilersen, Andreas Thomas, Simonsen, L. & Sneppen, Kim, 2 Sep 2022, In: Epidemics. 40, 7 p., 100613.Research output: Contribution to journal › Journal article › Research › peer-review
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Locally self-organized quasicritical percolation in a multiple-disease model
Juul, J. S. & Sneppen, Kim, 30 Sep 2011, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 84, 3, p. 0036119 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Labyrinthine clustering in a spatial rock-paper-scissors ecosystem
Juul, J. S., Sneppen, Kim & Mathiesen, Joachim, 8 Apr 2013, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 87, 4, p. 042702 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Kronik: Risikobaseret genåbning af Danmark kan give færre alvorligt syge og en hurtigere genåbning
Kirkeby, Carsten, Græsbøll, K., Halasa, T., Sneppen, Kim & Christiansen, L. E., 2020, In: Ingenøren.dk.Research output: Contribution to journal › Journal article › Communication
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Komolgorov scaling from random force fields
Jensen, Mogens Høgh, Sneppen, Kim & Angheluta, L., 2008, In: EPL. 84, 1, p. 10011 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Key players in the genetic switch of bacteriophage TP901-1.
Alsing, A., Pedersen, M., Sneppen, Kim & Hammer, K., 19 Jan 2011, In: Biophysical Journal. 100, 2, p. 313-321 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Jag1-Notch cis-interaction determines cell fate segregation in pancreatic development
sgk681, sgk681, Seymour, Philip Allan, Sneppen, Kim, Trusina, Ala, Egeskov-Madsen, A. L. R., Jørgensen, Mette Christine, Jensen, Mogens Høgh & Serup, Palle, 2023, In: Nature Communications. 14, 17 p., 348.Research output: Contribution to journal › Journal article › Research › peer-review
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Information spreading and development of cultural centers
Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 18 May 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 85, 5, p. 056116 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2
Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.Research output: Contribution to journal › Journal article › Research › peer-review
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Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations
Ping, D., Wang, T., Fraebel, D. T., Maslov, S., Sneppen, Kim & Kuehn, S., 1 Aug 2020, In: ISME Journal. 14, 8, p. 2007-2018 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Hierarchy measures in complex networks
Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.Research output: Contribution to journal › Journal article › Research › peer-review
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Hierarchy and anti-hierarchy in real and scale free networks
Sneppen, Kim & Minnhagen, P., 2004, In: Physical Review Letters. 92, p. 178702Research output: Contribution to journal › Journal article › Research › peer-review
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Hide-and-seek on complex networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Mar 2005, In: EPL. 69, 5, p. 853-859Research output: Contribution to journal › Journal article › Research › peer-review
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Globalization in a nutshell
Sneppen, Kim & Bornholdt, S., 29 Oct 2018, In: Physical Review E. 98, 4, 6 p., 022314.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic regulation of fluxes: iron homeostasis escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-4967Research output: Contribution to journal › Journal article › Research › peer-review
Genetic regulation of fluxes: iron homeostasis of Escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-7 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic Regulatory Networks that count to 3
Lehmann, M. & Sneppen, Kim, 1 Jul 2013, In: Journal of Theoretical Biology. 329, p. 15-19 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Gene duplication models for directed networks with limits on growth
Enemark, J. & Sneppen, Kim, 2008, In: Journal of Statistical Mechanics: Theory and Experiment. 2007, p. P11007Research output: Contribution to journal › Journal article › Research › peer-review
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Functional alignment of regulatory networks: a study of temperate phages
Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603Research output: Contribution to journal › Journal article › Research › peer-review
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Frustration driven stock market dynamics: Leverage effect and asymmetry
Heden Ahlgren, P. T., Jensen, Mogens Høgh, Simonsen, I., Donangelo, R. & Sneppen, Kim, 2007, In: Physica A: Statistical Mechanics and its Applications. 383, 1, p. 1-4 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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From kill the winner to eliminate the winner in open phage-bacteria systems
Marantos, Anastasios, Mitarai, Namiko & Sneppen, Kim, 8 Aug 2022, In: PLOS Computational Biology. 18, 8, 15 p., e1010400.Research output: Contribution to journal › Journal article › Research › peer-review
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Four simple rules that are sufficient to generate the mammalian blastocyst
Nissen, Silas Boye, Perera Pérez, Marta, Martin Gonzalez, Javier, Morgani, S. M. C., Jensen, Mogens Høgh, Sneppen, Kim, Brickman, Joshua Mark & Trusina, Ala, 12 Jul 2017, In: PLOS Biology. 15, 7, p. 1-30 e2000737.Research output: Contribution to journal › Journal article › Research › peer-review
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Food Web Assembly Rules for Generalized Lotka-Volterra Equations
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, Feb 2016, In: PLoS Computational Biology. 12, 2, e1004727.Research output: Contribution to journal › Journal article › Research › peer-review
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Flow effects in intermediate-energy nuclear collisions
Barz, H. W., Bondorf, J. P., Donangelo, R., Elmér, R., Hansen, F. S., Jakobsson, B., Karlsson, L., Nifenecker, H., Schulz, H., Schussler, F., Sneppen, Kim & Söderström, K., 2 Sep 1991, In: Nuclear Physics, Section A. 531, 2, p. 453-460 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Fear and its implications for stock markets
Simonsen, I., Ahlgren, P. H., Jensen, Mogens Høgh, Danangelo, R. & Sneppen, Kim, 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 2, p. 153-158Research output: Contribution to journal › Journal article › Research › peer-review
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Fast Translation within the First 45 Codons Decreases mRNA Stability and Increases Premature Transcription Termination in E. coli
Pedersen, Steen, Terkelsen, Thilde Bagger, Eriksen, M., Hauge, M. K., Lund, C. C., Sneppen, Kim & Mitarai, Namiko, 2019, In: Journal of Molecular Biology. 431, 6, p. 1088-1097 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Exploring the contribution of exposure heterogeneity to the cessation of the 2014 Ebola epidemic
Uekermann, F., Simonsen, L. & Sneppen, Kim, 1 Feb 2019, In: PLoS ONE. 14, 2, 11 p., e0210638.Research output: Contribution to journal › Review › Research › peer-review
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Exploring the Link between Nucleosome Occupancy and DNA Methylation
Lövkvist, Cecilia, Sneppen, Kim & Härter, Jan Olaf Mirko, 12 Jan 2018, In: Frontiers in Genetics. 8, 7 p., 232.Research output: Contribution to journal › Journal article › Research › peer-review
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Existence and construction of large stable food webs
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.Research output: Contribution to journal › Journal article › Research › peer-review
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Establishment of heterochromatin in domain-size-dependent bursts
Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.Research output: Contribution to journal › Journal article › Research › peer-review
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Epigenetics as a first exit problem
Sneppen, Kim & Aurell, E., 2002, In: Physical Review Letters. 88, 4, p. 048101 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Epigenetic switching with asymmetric bridging interactions
Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Emerging diversity in a population of evolving intransitive dice
Kirkegaard, Julius Bier & Sneppen, Kim, 17 Nov 2022, In: Physical Review E. 106, 5, 6 p., 054409.Research output: Contribution to journal › Journal article › Research › peer-review
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Emergence of networks of shared restriction-modification systems in phage-bacteria ecosystems
Eriksen, R. S., Malhotra, N., Seshasayee, A. S. N., Sneppen, Kim & Krishna, S., 2022, In: Journal of Biosciences. 47, 3, 19 p., 38.Research output: Contribution to journal › Journal article › Research › peer-review
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Emergence of diversity in a model ecosystem
Mitarai, Namiko, Mathiesen, Joachim & Sneppen, Kim, 30 Jul 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 86, 1, p. 011929 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Emergence and decline of scientific paradigms
Bornholdt, S., Jensen, Mogens Høgh & Sneppen, Kim, 2 Feb 2011, In: Physical Review Letters. 106, 5, p. 058701 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Efficient degradation and expression prioritization with small RANs
Mitarai, Namiko, Andersson, A. M. C., Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Physical Biology. 4, 3, p. 164-171Research output: Contribution to journal › Journal article › Research › peer-review
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Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements
Hao, N., Sneppen, Kim, Shearwin, K. E. & Dodd, I. B., 19 May 2017, In: Nucleic Acids Research. 45, 9, p. 5074-5085Research output: Contribution to journal › Journal article › Research › peer-review
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Effect of supercoiling on the λ switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 1 Jan 2014, In: Bacteriophage. 4, 2, p. 1-5 5 p., e27517.Research output: Contribution to journal › Journal article › Research › peer-review
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Ecosystems with Mutually Exclusive Interactions Self-Organize to a State of High Diversity
Mathiesen, Joachim, Mitarai, Namiko, Sneppen, Kim & Trusina, Ala, 25 Oct 2011, In: Physical Review Letters. 107, 18, p. 188101Research output: Contribution to journal › Journal article › Research › peer-review
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Economy of operon formation: cotranscription minimizes shortfall in protein complexes
Sneppen, Kim, Pedersen, Steen, Krishna, S., Dodd, I. B. & Semsey, S., 21 Sep 2010, In: Microbe. 1, 4, p. e00177-10Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamics of uptake and metabolism of small molecules in cellular response systems
Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: PLoS ONE. 4, 3, p. e4923Research output: Contribution to journal › Journal article › Research › peer-review
Dynamics of uptake and metabolism of small molecules in cellular response systems
Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: P L o S One. 4, 3, p. e4923Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamics of the recovery from sRNA-mediated gene silencing
Semsey, S., Bemjamin, J., Mitarai, Namiko, Krishna, S., Csiszovszki, Z., Sneppen, Kim & Masse, E., 2009, In: Cell Cycle. 8, 18, p. 2863-2864 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamical genetic regulation
Jensen, Mogens Høgh, Krishna, S., Sneppen, Kim & Tiana, G., 2008, Springer. (Evolution from cellular to social scales, book series: Nato security through science series B: Physics and biophysics.Conference of the Nato-advanced study institute on evolution from cellular to social scales geilo, Norway april 10-20,2007, p.61-68.).Research output: Book/Report › Book › peer-review
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Dynamical analysis on gene activity in the presence of repressors and an interfering promoter
Nakanishi, H., Mitarai, Namiko & Sneppen, Kim, 1 Nov 2008, In: Biophysical Journal. 95, 9, p. 4228-4240Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Benjamin, J. M., Krishna, S., Semsey, S., Csiszovszki, Z., Massé, E. & Sneppen, Kim, 30 Jun 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 26, p. 10655-9 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity
Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.Research output: Contribution to journal › Journal article › Research › peer-review
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Dominant negative autoregulation limits steady-state repression levels in gene networks
Semsey, S., Krishna, S., Erdossy, J., Horvath, P., Orosz, L., Sneppen, Kim & Adhya, S., 2009, In: Journal of Bacteriology. 191, 14, p. 4487-4491 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
Dominant negative autoregulation limits steady-state repression levels in gene networks
Semsey, S., Krishna, S., Erdossy, J., Horváth, P., Orosz, L., Sneppen, Kim & Adhya, S., Jul 2009, In: Journal of Bacteriology. 191, 14, p. 4487-91 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Diversity and ecotones in a model ecosystems of sessile species
Hofer, M. & Sneppen, Kim, 20 Feb 2024, In: Physical Review E. 109, 2, 7 p., 024309.Research output: Contribution to journal › Journal article › Research › peer-review
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Diversity Waves in Collapse-Driven Population Dynamics
Maslov, S. & Sneppen, Kim, 1 Sep 2015, In: P L o S One. 11, 9, e1004440.Research output: Contribution to journal › Journal article › Research › peer-review
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Distributions of Self Interactions and Voids in 1+1d Directed Percolation
Huber, G., Jensen, Mogens Høgh & Sneppen, Kim, 1 Sep 1995, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 52, 3, p. 2133-2136Research output: Contribution to journal › Journal article › Research
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Direct and indirect effects in the regulation of overlapping promoters
Bendtsen, K. M., Erdossy, J., Csiszovski, Z., Svenningsen, Sine Lo, Sneppen, Kim, Krishna, S. & Semsey, S., 2011, In: Nucleic Acids Research. 39, 16, p. 6879-6885 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Diffusion retardation by binding of tobramycin in an alginate biofilm model
Cao, B., Christophersen, L., Kolpen, Mette, Jensen, Peter Østrup, Sneppen, Kim, Høiby, Niels, Moser, Claus Ernst & Sams, T., 21 Apr 2016, In: P L o S One. 11, 4, 11 p., e0153616.Research output: Contribution to journal › Journal article › Research › peer-review
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Diffusion on complex networks: a way to probe their large-scale topological structures
Sneppen, Kim, Simonsen, I. & Eriksen, K., 2004, In: Physica A: Statistical Mechanics and its Applications. 336, p. 163-173Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differentiation of developing olfactory neurons analysed in terms of coupled epigenetic landscapes
Alsing, A. & Sneppen, Kim, 1 May 2013, In: Nucleic Acids Research. 41, 9, 4755-4764.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differences in social activity increase efficiency of contact tracing
Nielsen, Bjarke Frost, Sneppen, Kim, Simonsen, L. & Mathiesen, Joachim, 2 Oct 2021, In: European Physical Journal B. 94, 10, 11 p., 209.Research output: Contribution to journal › Journal article › Research › peer-review
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Detection in complex networks: correlation profile of the internet
Sneppen, Kim, Maslov, S. & Zalizynak, A., 2004, In: Physica A: Statistical Mechanics and its Applications. 333, p. 529-540Research output: Contribution to journal › Journal article › Research › peer-review
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Degree landscapes in scale-free networks
Axelsen, J. B., Bernhardsson, S., Rosvall, M., Sneppen, Kim & Trusina, Ala, Sep 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 3Research output: Contribution to journal › Journal article › Research › peer-review
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Deconstructing the principles of ductal network formation in the pancreas
Dahl-Jensen, Svend Bertel, Yennek, S., Flasse, L., Larsen, Hjalte List, Sever, D., Karremore, G., Novak, Ivana, Sneppen, Kim & Botton, A., 2018, In: PLOS Biology. 16, 7, 25 p., e2002842.Research output: Contribution to journal › Journal article › Research › peer-review
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Danske Universiteter 2020: Hvidbog til Forskningspolitisk årsmøde 2012, Det Kongelige Danske Videnskabernes Selskab
Bache, C., Christiansen, F. B., Løkke, Anne, Smith, N. & Sneppen, Kim, 2012, Det Kongelige Danske Videnskabernes Selskab. 50 p.Research output: Book/Report › Report
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DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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DNA methylation in human epigenomes depends on local topology of CpG sites
Lövkvist, Cecilia, Dodd, I. B., Sneppen, Kim & Härter, Jan Olaf Mirko, 20 Jun 2016, In: Nucleic Acids Research. 44, 11, p. 5123-5132Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cost-benefit of limited isolation and testing in COVID-19 mitigation
Eilersen, Andreas Thomas & Sneppen, Kim, 29 Oct 2020, In: Scientific Reports. 10, 1, 7 p., 18543.Research output: Contribution to journal › Journal article › Research › peer-review
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Correction to; Why Do Phage Play Dice? (vol 83, pg 11416, 2009)
Avlund, M., Dodd, I. B., Semsey, S., Sneppen, Kim & Krishna, S., 1 Mar 2012, In: Journal of Virology. 86, 5, p. 22898-2898 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Cooperativity in a trading model with memory and production
Donangelo, R. & Sneppen, Kim, 2002, In: Physica A: Statistical Mechanics and its Applications. 316, 1-4, p. 581-591Research output: Contribution to journal › Journal article › Research › peer-review
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Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae
Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302Research output: Contribution to journal › Journal article › Research › peer-review
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Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity in Toxin-Antitoxin Regulation Prevents Random Toxin Activation and Promotes Fast Translational Recovery
Cataudella, I., Trusina, Ala, Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 11 Apr 2012, In: Nucleic Acids Research. 40, 14, p. 6424-6434Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational architecture of the yeast regulatory network: Workshop on Flexibility in Biomolecules, MAY 15-18, 2005 Tempe, AZ
Maslov, S. & Sneppen, Kim, 2005, In: Physical Biology. 2, 4, Sp. iss. Sl, p. S94-S100Research output: Contribution to journal › Journal article › Research › peer-review
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Competition between diffusion and fragmentation: an important evolutionary process of nature
Borg, J., Jensen, Mogens Høgh, Mathiesen, J. K., Olesen, Poul & Sneppen, Kim, 2003, In: Physical Review Letters. 91, p. 266103Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Communication boundaries in networks
Sneppen, Kim, Rosvall, M. & Trussina, A., 2005, In: Physical Review Letters. 94, 23, p. 238701Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combinatorics of feedback in cellular uptake and metabolism of small molecules
Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Proceedings of the National Academy of Science of the United States of America. 52, p. 20815-20819Research output: Contribution to journal › Conference article › Research › peer-review
Combinatorics of feedback in cellular uptake and metabolism of small molecules
Krishna, S., Semsey, S. & Sneppen, Kim, 26 Dec 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 52, p. 20815-9 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 10093
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
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