Namiko Mitarai
Associate Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- 2017
- Published
Existence and construction of large stable food webs
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation
Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deterministic extinction by mixing in cyclically competing species
Feldager, C. W., Mitarai, Namiko & Ohta, H., 20 Mar 2017, In: Physical Review E. 95, 3, 032318.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Occlusion of the ribosome binding site connects the translational initiation frequency, mRNA stability and premature transcription termination
Eriksen, M., Sneppen, Kim, Pedersen, Steen & Mitarai, Namiko, 14 Mar 2017, In: Frontiers in Microbiology. 8, 7 p., 362.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of phase transitions in a model ecosystem of sessile species
Uekermann, F., Mathiesen, Joachim & Mitarai, Namiko, 13 Mar 2017, In: Physical Review E. 95, 3, 032409.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases
Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bifurcation of transition paths induced by coupled bistable systems
Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage lambda and Escherichia coli
Mitarai, Namiko, Brown, Stanley & Sneppen, Kim, 11 Apr 2016, In: Journal of Bacteriology. 198, 12, p. 1783-1793Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three is much more than two in coarsening dynamics of cyclic competitions
Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Food Web Assembly Rules for Generalized Lotka-Volterra Equations
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, Feb 2016, In: PLoS Computational Biology. 12, 2, e1004727.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity
Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies
Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .Research output: Contribution to journal › Journal article › Research › peer-review
- 2014
- Published
Phage and bacteria support mutual diversity in a narrowing staircase of coexistence
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 3 Nov 2014, In: I S M E Journal. 28, 11, p. 2317-2326Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Speciation, diversification, and coexistence of sessile species that compete for space
Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disturbance accelerates the transition from low- to high-diversity state in a model ecosystem
Botta, F. & Mitarai, Namiko, 4 Feb 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 89, 2, 022704.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling rises and falls in money addicted social hierarchies
Dybiec, B., Mitarai, Namiko & Sneppen, Kim, 2014, In: Physica Scripta. 89, 8, 085002.Research output: Contribution to journal › Journal article › Research › peer-review
- 2013
- Published
Control of ribosome traffic by position-dependent choice of synonymous codons
Mitarai, Namiko & Pedersen, Steen, 8 Oct 2013, In: Physical Biology. 10, 5, 056011.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Experimental observation of shear thickening oscillation
Nagahiro, S., Nakanishi, H. & Mitarai, Namiko, 1 Oct 2013, In: EPL. 104, 2, 28002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Entrainment of noise-induced and limit cycle oscillators under weak noise
Mitarai, Namiko, Alon, U. & Jensen, Mogens Høgh, 1 Jun 2013, In: Chaos. 23, 2, 023125.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
Circuit architecture explains functional similarity of bacterial heat shock responses
Masayo, I., Mitarai, Namiko & Trusina, Ala, 1 Dec 2012, In: Physical Biology. 9, 6, p. 066003Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Axelrod model: accepting or discussing
Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 1 Oct 2012, In: European Physical Journal B. Condensed Matter and Complex Systems. 85, 10, p. 357Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multistability with a Metastable Mixed State
Sneppen, Kim & Mitarai, Namiko, 5 Sep 2012, In: Physical Review Letters. 109, 10, p. 100602 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Switching between oscillations and homeostasis in competing negative and positive feedback motifs
Li, W., Krishna, S., Pigolotti, S., Mitarai, Namiko & Jensen, Mogens Høgh, 21 Aug 2012, In: Journal of Theoretical Biology. 307, p. 205-210Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emergence of diversity in a model ecosystem
Mitarai, Namiko, Mathiesen, Joachim & Sneppen, Kim, 30 Jul 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 86, 1, p. 011929 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12071632
Most downloads
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1919
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1475
downloads
Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
848
downloads
Speciation, diversification, and coexistence of sessile species that compete for space
Research output: Contribution to journal › Journal article › Research › peer-review
Published