Kim Sneppen
Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
Why do phage play dice?
Avlund, M., Dodd, I. B., Semsey, S., Sneppen, Kim & Krishna, S., Nov 2009, In: Journal of Virology. 83, 22, p. 11416-20 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Why do phage play dice?
Avlund, M., Dodd, I. B., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: Journal of Virology. 83, 22, p. 11416-11420 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Well-temperate phage: optimal bet-hedging against local environmental collapses
Maslov, S. & Sneppen, Kim, 2 Jun 2015, In: Scientific Reports. 5, 10523.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Visualization of large-scale correlations in gene expressions
Eriksen, K., Hörnquist, M. & Sneppen, Kim, 2004, In: Functional & Integrative Genomics. 4, 4, p. 241-245Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variability of Individual Infectiousness Derived from Aggregate Statistics of COVID-19
Kirkegaard, Julius Bier & Sneppen, Kim, 15 Jan 2021, In: medRxiv : the preprint server for health sciences. 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variability alignment identifies functional regions in tubulin paralogs
Sneppen, Kim, 2004, In: Protein Science. 13, p. 25-31Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Upstream plasticity and downstream robustness in evolution of molecular networks
Maslov, S., Sneppen, Kim, Astrup Eriksen, K. & Yan, K., 2004, In: BMC Evolutionary Biology. 4, p. 9-Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ultrasensitive gene regulation by positive feedback loops in nucleosome modification
Sneppen, Kim, Micheelsen, M. A. & Dodd, I. B., 15 Apr 2008, In: Molecular Systems Biology. 4, p. 182Research output: Contribution to journal › Journal article › Research › peer-review
- Published
UV-induced mutagenesis in Escherichia coli SOS response: A quantitative model
Krishna, S., Maslov, S. & Sneppen, Kim, 2007, In: PLoS Computational Biology. 3, 3, p. 451-462Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tradeoff between speed and reproductive number in pathogen evolution
Eilersen, Andreas Thomas, Nielsen, Bjarke Frost & Sneppen, Kim, 12 Jun 2023, In: Physical Review Research. 5, 2, 8 p., 023003.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Toolbox model of evolution of prokaryotic metabolic networks and their regulation
Maslov, S., Krishna, S., Pang, T. Y. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 24, p. 9743-9748 5 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Time walkers and spatial dynamics of ageing information
Lizana, G. L., Rosvall, M. & Sneppen, Kim, 29 Jan 2010, In: Physical Review Letters. 104, 4, p. 040603 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Time Delay as a Key to Apaptosis Induction in the p53 Network
Tiana, G., Jensen, Mogens Høgh & Sneppen, Kim, 2002, In: European Phys. Journal. vol. B 29, p. 135Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three is much more than two in coarsening dynamics of cyclic competitions
Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Thermodynanics of Proteins: Fast Folders and Sharp Transitions
Bak, P., Sneppen, Kim & Jensen, Mogens Høgh, 2002, In: Computer Physics Communications. vol. 147, p. 307-312Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Thermodynamics of proteins: Fast folders and sharp transitions
Bakk, A., Dommersnes, P. G., Hansen, A., Høye, J. S., Sneppen, Kim & Jensen, Mogens Høgh, 1 Jan 2002, In: Computer Physics Communications. 147, 1-2, p. 307-312 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theory of invasion extinction dynamics in minimal food webs
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 12 Feb 2018, In: Physical Review E. 97, 2, 10 p., 022404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theory for the stability and regulation of epigenetic landscapes
Micheelsen, M. A., Mitarai, Namiko, Sneppen, Kim & Dodd, I. B., 4 Jun 2010, In: Physical Biology. 7, 2, p. 026010 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theoretical tool bridging cell polarities with development of robust morphologies
Nissen, Silas Boye, Rønhild, S., Trusina, Ala & Sneppen, Kim, 27 Nov 2018, In: eLife. 7, 25 p., e38407.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theoretical analysis of epigenetic cell memory by nucleosome modification
Dodd, I. B., Micheelsen, M. A., Sneppen, Kim & Thon, Genevieve, 2007, In: Cell. 129, 4, p. 813-22 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theoretical analysis of Polycomb-Trithorax systems predicts that poised chromatin is bistable and not bivalent
Sneppen, Kim & Ringrose, L., 13 May 2019, In: Nature Communications. 10, 18 p., 2133.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The uneasy coexistence of predators and pathogens
Eilersen, Andreas Thomas & Sneppen, Kim, 2 Jul 2020, In: The European Physical Journal E: Soft Matter and Biological Physics. 43, 7, 7 p., 42.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The transcription factor Atf1 lowers the transition barrier for nucleosome-mediated establishment of heterochromatin
Nickels, Jan Fabio, Della-Rosa, M. E., Miguelez Goyeneche, I., Charlton, Sebastian Jespersen, Sneppen, Kim & Thon, Genevieve, 2022, In: Cell Reports. 39, 7, 17 p., 110828.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The generation of promoter-mediated transcriptional noise in bacteria
Mitarai, Namiko, Dodd, I. B., Crooks, M. T. & Sneppen, Kim, 11 Jul 2008, In: PLoS Computational Biology. 4, 7, p. e 10000109Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Pedersen, M., Nissen, S., Mitarai, Namiko, Svenningsen, Sine Lo, Sneppen, Kim & Pedersen, Steen, 2011, In: Journal of Molecular Biology. 407, 1, p. 35-44 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of phage predation on a microcolony
Eriksen, R. S., Larsen, Frej Andreas Nøhr, Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 2024, In: Biophysical Journal. 123, 2, p. 147-156 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The counterintuitive implications of superspreading diseases
Nielsen, B. F., Sneppen, Kim & Simonsen, L., 31 Oct 2023, In: Nature Communications. 14, 1, 3 p., 6954.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The cost and capacity of signaling in the Escherichia coli proetin reaction network
Axelsen, J. B., Krishna, S. & Sneppen, Kim, 24 Jan 2008, In: Journal of Statistical Mechanics: Theory and Experiment. p. P010018Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The COVID-19 pandemic: key considerations for the epidemic and its control
Ørskov, S., Nielsen, Bjarke Frost, Føns, S., Sneppen, Kim & Simonsen, L., Jul 2021, In: APMIS. 129, 7, p. 408-420 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Targeted bacterial immunity buffres phage diversity
Härter, Jan Olaf Mirko, Trusina, Ala & Sneppen, Kim, 21 Aug 2011, In: Journal of Virology. 85, 20, p. 10554-10560 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronization model for stock market asymmetry
Donangelo, R., Jensen, Mogens Høgh, Simonsen, I. & Sneppen, Kim, 2006, In: Journal of Statistical Mechanics: Theory and Experiment. L11001, p. 1-8Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustained oscillations and time delay in gene expression of protein hesl
Jensen, Mogens Høgh & Sneppen, Kim, 2003, In: FEBS Letters. 541, p. 176-177Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustainable diversity of phage-bacteria systems
Mitarai, Namiko, Marantos, Anastasios & Sneppen, Kim, 1 Jun 2023, In: Current Opinion in Systems Biology. 35, 6 p., 100468.Research output: Contribution to journal › Review › Research › peer-review
- Published
Sustainability of spatially distributed bacteria-phage systems
Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 2020, In: Scientific Reports. 10, 1, p. 1-12 3154.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustainability of Virulence in a Phage-Bacterial Ecosystem
Heilmann, Silja, Sneppen, Kim & Krishna, S., 1 Mar 2010, In: Journal of Virology. 84, 6, p. 3016-3022 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Superspreading quantified from bursty epidemic trajectories
Kirkegaard, Julius Bier & Sneppen, Kim, 16 Dec 2021, In: Scientific Reports. 11, 1, 7 p., 24124.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Superspreading of airborne pathogens in a heterogeneous world
Kirkegaard, Julius Bier, Mathiesen, Joachim & Sneppen, Kim, 27 May 2021, In: Scientific Reports. 11, 1, 9 p., 11191.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and function of negative feedback loops at the interface of genetic and metabolic networks
Krishna, S., Andersson, A. M. C., Semsey, S. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 8, p. 2455-2462Research output: Contribution to journal › Journal article › Research › peer-review
Structure and function of negative feedback loops at the interface of genetic and metabolic networks
Krishna, S., Andersson, A. M. C., Semsey, S. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 8, p. 2455-62 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and communication in complex networks
Sneppen, Kim, 2006, In: NATO Science Series : Sub Series III, Computer and sytems sciences. p. 1-28Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Structural correlations in bacterial metabolic networks
Gerlee, P. D. M., Bernhardsson, P. J. S., Lizana, G. L. & Sneppen, Kim, 1 Jun 2010, In: FEBS Journal. 277, Suppl. 1, p. 114-114 1 p.Research output: Contribution to journal › Journal article › Research
- Published
Statistical multifragmentation: Comparison of two quite successful models
Gross, D. H. E. & Sneppen, Kim, 17 Jan 1994, In: Nuclear Physics A. 567, 2, p. 317Research output: Contribution to journal › Journal article › Research
- Published
Stabilization of epigenetic states of CpG islands by local cooperation
Sormani, G., Härter, Jan Olaf Mirko, Lövkvist, Cecilia & Sneppen, Kim, 2016, In: Molecular BioSystems. 12, 7, p. 2142-2146Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability Puzzles in λ Phage
Sneppen, Kim, 2002, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). vol. E 65, p. 051914Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spreading out of perturbations in reversible reaction networks
Maslov, S., Sneppen, Kim & Ispolatov, I., 2007, In: New Journal of Physics. 9, 273Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spreading of multiple epidemics with cross immunization
Uekermann, F. & Sneppen, Kim, 13 Sep 2012, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 86, 3, Part 2, p. 036108 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spiky oscillations in NF-KB signalling
Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2005, In: Proceedings of the National Academy of Science of the United States of America. 103, p. 10840-10845Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specificity and Stability in Topology of Protein Networks
Sneppen, Kim, 2002, In: Kexue (Shanghai). vol. 296, p. 910-256Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specific contacts of the -35 region of the galP1 promoter by RNA polymerase inhibit GalR-mediated DNA looping repression
Csiszovszki, Z., Lewis, D. E. A., Le, P., Sneppen, Kim & Semsey, S., 1 Nov 2012, In: Nucleic Acids Research. 40, 20, p. 10064-10072 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Speciation, diversification, and coexistence of sessile species that compete for space
Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665Research output: Contribution to journal › Journal article › Research › peer-review
ID: 10093
Most downloads
-
2298
downloads
Direct and indirect effects in the regulation of overlapping promoters
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
2144
downloads
Single-cell Analysis of Lambda Immunity Regulation
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1918
downloads
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published