- 2023
- Submitted
Three-component Bose-Einstein condensates and wetting without walls
Indekeu, J. O., Thu, N. V. & Berx, Jonas, 24 Sep 2023, (Submitted).Research output: Working paper › Preprint › Research
- Published
Transition of social organisations driven by gift relationships
Itao, K. & Kaneko, Kunihiko, 29 Apr 2023, In: Humanities and Social Sciences Communications. 10, 1, 10 p., 188.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Introducing the Automated Ligand Searcher
Jacobsen, L., Hungerland, J., Bačić, V., Gerhards, L., Schuhmann, Fabian Johannes & Solov’yov, I. A., 11 Dec 2023, In: Journal of Chemical Information and Modeling. 63, 23, p. 7518-7528 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nudging cooperation among agents in an experimental social network
Jensen, Gorm Gruner, Busch, M. B., Piovesan, Marco & Härter, Jan Olaf Mirko, 12 Sep 2023, In: Applied Network Science. 8, 1, 13 p., 62.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Group-specific behavior change following terror attacks
Juul, J. L., Alessandretti, L., Dammeyer, Jesper, Zettler, Ingo, Jørgensen, Sune Lehmann & Mathiesen, Joachim, Apr 2023, In: Journal of Computational Social Science. 6, p. 1-18Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A bipartite function of ESRRB can integrate signaling over time to balance self-renewal and differentiation
Knudsen, Teresa Emmilie Toudal, Hamilton, W. B., Proks, Martin, Lykkegaard, M., Linneberg-Agerholm, M., Nielsen, Alexander Valentin, Perera Pérez, Marta, Malzard, L. L., Trusina, Ala & Brickman, Joshua Mark, 2023, In: Cell Systems. 14, 9, p. 788-805.e8Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epidemic modelling of monitoring public behavior using surveys during pandemic-induced lockdowns
Koher, A., Jørgensen, F., Petersen, M. B. & Lehmann, S., 2023, In: Communications Medicine. 3, 1, 10 p., 80.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Homophily-Based Social Group Formation in a Spin Glass Self-Assembly Framework
Korbel, J., Lindner, S. D., Pham, Minh Tuan, Hanel, R. & Thurner, S., 30 Jan 2023, In: Physical Review Letters. 130, 5, 6 p., 057401.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Solvable neural network model for input-output associations: Optimal recall at the onset of chaos
Kurikawa, T. & Kaneko, Kunihiko, 8 Dec 2023, In: Physical Review Research. 5, 4, 8 p., 043221.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the complex dynamics of biological oscillators and their downstream effects
Lucchetti, Alessandra, 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 133 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Thermodynamics of interacting systems: The role of the topology and collective effects
Mamede, I. N., Proesmans, Karel Josef A & Fiore, C. E., 22 Dec 2023, In: Physical Review Research. 5, 4, 12 p., 043278.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population dynamics of phage-bacteria ecosystems under challenging conditions
Marantos, Anastasios, 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 131 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Models of low data stochastic time series in Cell dynamics and Covid-19
Martiny, E. S., 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 74 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Dynamic Fluid Connectivity Controls Solute Dispersion in Multiphase Porous Media Flow
Mathiesen, Joachim, Linga, G., Misztal, M., Renard, F. & Le Borgne, T., 28 Aug 2023, In: Geophysical Research Letters. 50, 16, 11 p., e2023GL105233.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Avoidance of error catastrophe via proofreading innate to template-directed polymerization
Matsubara, Y. J., Takeuchi, N. & Kaneko, Kunihiko, 13 Mar 2023, In: Physical Review Research. 5, 13 p., 013170.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Generic optimization by fast chaotic exploration and slow feedback fixation
Matsushita, Y. & Kaneko, Kunihiko, 10 Apr 2023, In: Physical Review Research. 5, 7 p., 023017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Machine-learning vs. logistic regression for preoperative prediction of medical morbidity after fast-track hip and knee arthroplasty—a comparative study
Michelsen, C., Jørgensen, C. C., Heltberg, Mathias Spliid, Jensen, Mogens Høgh, Lucchetti, Alessandra, Petersen, P. B., Petersen, T., Kehlet, Henrik, Madsen, F., Hansen, T. B., Gromov, Kirill, Jakobsen, T., Varnum, C., Overgaard, S., Andersen, Mikkel Rathsach & Hansen, L., 29 Nov 2023, In: BMC Anesthesiology. 23, 1, 12 p., 391.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Nature Exposure is Associated With Reduced Smartphone Use
Minor, Kelton Ray, Glavind, Kristoffer Lind, Schwartz, A. J., Danforth, C. M., Lehmann, S. & Bjerre-Nielsen, Andreas, 27 Apr 2023, (E-pub ahead of print) In: Environment and Behavior.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustainable diversity of phage-bacteria systems
Mitarai, Namiko, Marantos, Anastasios & Sneppen, Kim, 1 Jun 2023, In: Current Opinion in Systems Biology. 35, 6 p., 100468.Research output: Contribution to journal › Review › Research › peer-review
- Published
Mechanical basis and topological routes to cell elimination
Monfared, S., Ravichandran, G., Andrade, J. & Doostmohammadi, Amin, 18 Apr 2023, In: eLife. 12, 20 p., 82435.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Thermoplasmonic Vesicle Fusion Reveals Membrane Phase Segregation of Influenza Spike Proteins
Moreno Pescador, Guillermo Sergio, Arastoo, Mohammadreza, Thusgaard Ruhoff, Victoria, Chiantia, S., Daniels, R. & Bendix, Poul Martin, 11 Apr 2023, In: Nano Letters. 23, 8, p. 3377-3384 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2
Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The counterintuitive implications of superspreading diseases
Nielsen, B. F., Sneppen, Kim & Simonsen, L., 31 Oct 2023, In: Nature Communications. 14, 1, 3 p., 6954.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inferring mechanical properties of the SARS-CoV-2 virus particle with nano-indentation tests and numerical simulations
Nonn, A., Kiss, B., Pezeshkian, Weria, Tancogne-Dejean, T., Cerrone, A., Kellermayer, M., Bai, Y., Li, W. & Wierzbicki, T., 8 Oct 2023, In: Journal of the Mechanical Behavior of Biomedical Materials. 148, 15 p., 106153.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Double-replica theory for evolution of genotype-phenotype interrelationship
Pham, Minh Tuan & Kaneko, Kunihiko, 21 Apr 2023, In: Physical Review Research. 5, 2, 13 p., 023049.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Precision-dissipation trade-off for driven stochastic systems
Proesmans, Karel Josef A, 24 Aug 2023, In: Communications Physics. 6, 1, 6 p., 226.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diffusion dynamics and characterization of attogram masses in optically trapped single nanoparticles using laser-induced plasma imaging
Purohit, P., Fortes, F. J. J. & Laserna, J., 22 Feb 2023, In: Nano Research. 16, p. 7470-7480 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Close, but not too close: a mesoscopic description of (a)symmetry and membrane shaping mechanisms
Thusgaard Ruhoff, Victoria, Bendix, Poul Martin & Pezeshkian, Weria, 16 Jan 2023, In: Emerging topics in life sciences. 7, 1, p. 81-93 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spontaneous flows and dynamics of full-integer topological defects in polar active matter
Rønning, J., Renaud, J., Doostmohammadi, Amin & Angheluta, L., 21 Jul 2023, In: Soft Matter. 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary shaping of low-dimensional path facilitates robust and plastic switching between phenotypes
Sakata, A. & Kaneko, Kunihiko, 26 Dec 2023, In: Physical Review Research. 5, 4, 19 p., 043296.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prediction of cross-fitness for adaptive evolution to different environmental conditions: Consequence of phenotypic dimensional reduction
Sato, T. U., Furusawa, C. & Kaneko, Kunihiko, 11 Dec 2023, In: Physical Review Research. 5, 4, 14 p., 043222.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epigenetic switching with asymmetric bridging interactions
Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Necking and failure of a particulate gel strand: signatures of yielding on different length scales
Thijssen, Kristian, Liverpool, T. B., Royall, P. C. & Jack, R. L., 2023, In: Soft Matter. 19, 38, p. 7412-7428 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lineage tracing identifies heterogeneous hepatoblast contribution to cell lineages and postembryonic organ growth dynamics
Unterweger, Iris Anne, Klepstad, J., Hannezo, E., Lundegaard, Pia Rengtved, Trusina, Ala & Ober, Elke, 2023, In: PLOS Biology. 21, 10, 30 p., e3002315.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active topological defect absorption by a curvature singularity
Vafa, F., Nelson, D. R. & Doostmohammadi, Amin, 20 Jul 2023, In: Journal of Physics Condensed Matter. 35, 42, 17 p., 425101.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Roadmap for optical tweezers
Volpe, G., Maragò, O. M., Rubinsztein-Dunlop, H., Pesce, G., Stilgoe, A. B., Volpe, G., Tkachenko, G., Truong, V. G., Chormaic, S. N., Kalantarifard, F., Elahi, P., Käll, M., Callegari, A., Marqués, M. I., Neves, A. A. R., Moreira, W. L., Fontes, A., Cesar, C. L., Saija, R., Saidi, A. & 63 others, , Apr 2023, In: Journal of Physics-Photonics. 5, 2, 136 p., 022501.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Role of Passive Cloud Volumes in the Transition From Shallow to Deep Atmospheric Convection
Vraciu, C. V., Kruse, Irene Livia & Härter, Jan Olaf Mirko, 16 Dec 2023, In: Geophysical Research Letters. 50, 23, 9 p., e2023GL105996.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Jag1-Notch cis-interaction determines cell fate segregation in pancreatic development
sgk681, sgk681, Seymour, Philip Allan, Sneppen, Kim, Trusina, Ala, Egeskov-Madsen, A. L. R., Jørgensen, Mette Christine, Jensen, Mogens Høgh & Serup, Palle, 2023, In: Nature Communications. 14, 17 p., 348.Research output: Contribution to journal › Journal article › Research › peer-review
- 2024
- Published
Dynamic control of the Bose-Einstein-like condensation transition in scalar active matter
Berx, Jonas, 27 Mar 2024, In: New Journal of Physics. 26, 14 p., 033049.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Universal thermodynamic bounds on the Fano factor of discriminatory networks with unidirectional transitions
Berx, Jonas & Proesmans, Karel Josef A, 15 Mar 2024, In: Europhysics Letters. 145, 8 p., 51001.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Thermoplasmonic Approach for Investigating Plasma Membrane Repair in Living Cells and Model Membranes
Danielsen, Helena Maria Dávidsdóttir, Arastoo, M. R., Moreno Pescador, Guillermo Sergio & Bendix, Poul Martin, 2024, In: Journal of Visualized Experiments. 203, 21 p., e65776.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active Matter under Control: Insights from Response Theory
Davis, L. K., Proesmans, Karel Josef A & Fodor, É., 7 Feb 2024, In: Physical Review X. 14, 1, 19 p., 011012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Experimental investigation of walking drops: Wave field and interaction with slit structures
Ellegaard, Clive Sigurd & Levinsen, Mogens, 11 Mar 2024, In: Physical Review E. 109, 3, 21 p., 035101.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of phage predation on a microcolony
Eriksen, R. S., Larsen, Frej Andreas Nøhr, Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 2024, In: Biophysical Journal. 123, 2, p. 147-156 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Different receptor models show differences in ligand binding strength and location: a computational drug screening for the tick-borne encephalitis virus
Finke, F., Hungerland, J., Solov’yov, I. A. & Schuhmann, Fabian Johannes, 13 May 2024, In: Molecular Diversity.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stochastic microbial dispersal drives local extinction and global diversity
Garrido Zornoza, Miguel, Mitarai, Namiko & Härter, Jan Olaf Mirko, 23 May 2024, In: Royal Society Open Science. 11, 5, 20 p., 231301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spontaneous self-constraint in active nematic flows
Head, L. C., Doré, C., Keogh, R. R., Bonn, Lasse Frederik, Negro, G., Marenduzzo, D., Doostmohammadi, Amin, Thijssen, Kristian, López-león, T. & Shendruk, T. N., 18 Jan 2024, In: Nature Physics. 20, 3, p. 492-500Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characteristics of Station‐Derived Convective Cold Pools Over Equatorial Africa
Höller, Jannik, Härter, Jan Olaf Mirko & Da Silva, N. A., 14 Mar 2024, In: Geophysical Research Letters. 51, 6, 10 p., e2023GL107308.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Detecting Cold Pool Family Trees in Convection Resolving Simulations
Höller, Jannik, Fiévet, Romain Frédéric Sébastien & Härter, Jan Olaf Mirko, 5 Feb 2024, In: Journal of Advances in Modeling Earth Systems. 16, 1, 21 p., e2023MS003682.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
U‐Net Segmentation for the Detection of Convective Cold Pools From Cloud and Rainfall Fields
Höller, Jannik, Fiévet, R., Engelbrecht, E. & Härter, Jan Olaf Mirko, 16 Jan 2024, In: Journal of Geophysical Research: Atmospheres. 129, 1, 16 p., e2023JD040126.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diversity and ecotones in a model ecosystems of sessile species
Hofer, M. & Sneppen, Kim, 20 Feb 2024, In: Physical Review E. 109, 2, 7 p., 024309.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bayesian inference is facilitated by modular neural networks with different time scales
Ichikawa, K., Kaneko, Kunihiko & Serre, T. (ed.), 13 Mar 2024, In: PLOS Computational Biology. 20, 3, 21 p., e1011879.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Alveolar cytokines and interferon autoantibodies in COVID-19 ARDS
Jonassen, T. B., Jørgensen, S. E., Mitchell, N. H., Mogensen, T. H., Berg, Ronan Martin Griffin, Ronit, A. & Plovsing, Ronni Thermann Reitz, 2024, In: Frontiers in Immunology. 15, 9 p., 1353012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Constructing universal phenomenology for biological cellular systems: an idiosyncratic review on evolutionary dimensional reduction
Kaneko, Kunihiko, 13 Feb 2024, In: Journal of Statistical Mechanics: Theory and Experiment. 2024, 2, 21 p., 024002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active Darcy’s Law
Keogh, R. R., Kozhukhov, T., Thijssen, Kristian & Shendruk, T. N., 30 Apr 2024, In: Physical Review Letters. 132, 18, 7 p., 188301.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Developmental hourglass: Verification by numerical evolution and elucidation by dynamical-systems theory
Kohsokabe, T., Kuratanai, S., Kaneko, Kunihiko & Maini, P. K. (ed.), 29 Feb 2024, In: PLOS Computational Biology. 20, 2, 24 p., e1011867.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Directed percolation and puff jamming near the transition to pipe turbulence
Lemoult, G., Mukund, V., Shih, H., Linga, G., Mathiesen, Joachim, Goldenfeld, N. & Hof, B., 27 May 2024, In: Nature Physics.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Work statistics at first-passage times
Mamede, I. N., Singh, Prashant, Pal, A., Fiore, C. E. & Proesmans, Karel Josef A, 19 Mar 2024, In: New Journal of Physics. 26, 3, 20 p., 033034.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Short-range correlation of stress chains near solid-to-liquid transition in active monolayers
Khosh Sokhan Monfared, Siavash, Ravichandran, G., Andrade, J. E. & Doostmohammadi, Amin, 8 May 2024, In: Journal of the Royal Society Interface. 21, 214, 8 p., 20240022.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Gompertz Law emerges naturally from the inter-dependencies between sub-components in complex organisms
Yde, Pernille, Jensen, Majken Karoline, Mitarai, Namiko & Bhatt, Samir, 2024, In: Scientific Reports. 14, 1, 11 p., 1196.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bending of a lipid membrane edge by annexin A5 trimers
Pandey, M. P., Telles de Souza, P. C., Pezeshkian, Weria & Khandelia, H., 2024, In: Biophysical Journal. 123, 8, p. 1006-1014 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mesoscale simulation of biomembranes with FreeDTS
Pezeshkian, Weria & Ipsen, J. H., 16 Jan 2024, In: Nature Communications. 15, 1, 10 p., 548.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Structural Rearrangements of Pigeon Cryptochrome 4 Undergoing a Complete Redox Cycle
Schuhmann, Fabian Johannes, Ramsay, J. L., Kattnig, D. R. & Solov’yov, I. A., 3 Apr 2024, In: The Journal of Physical Chemistry B. 128, 16, p. 3844-3855 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
4D Neutron Imaging of Solute Transport and Fluid Flow in Sandstone Before and After Mineral Precipitation
Shafabakhsh, P., Cordonnier, B., Pluymakers, A., Le Borgne, T., Mathiesen, Joachim, Linga, G., Hu, Y., Kaestner, A. & Renard, F., 13 Mar 2024, In: Water Resources Research. 60, 3, 19 p., e2023WR036293.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic and antagonistic effects of deterministic and stochastic cell-cell variations
Vedel, S., Košmrlj, A., Nunns, H. & Trusina, Ala, 9 May 2024, In: Physical Review E. 109, 5, 17 p., 054404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Universal Transitions between Growth and Dormancy via Intermediate Complex Formation
Yamagishi, J. F. & Kaneko, Kunihiko, 12 Mar 2024, In: Physical Review Letters. 132, 11, 7 p., 118401.Research output: Contribution to journal › Letter › Research › peer-review
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes
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Latest publications
Directed percolation and puff jamming near the transition to pipe turbulence
Research output: Contribution to journal › Journal article › Research › peer-review
Stochastic microbial dispersal drives local extinction and global diversity
Research output: Contribution to journal › Journal article › Research › peer-review
Different receptor models show differences in ligand binding strength and location: a computational drug screening for the tick-borne encephalitis virus
Research output: Contribution to journal › Journal article › Research › peer-review