- Published
A kinetic mechanism for cell sorting based on local variations in cell motility
Strandkvist, C., Juul, J., Baum, B., Kabla, A. J. & Duke, T., 6 Dec 2014, In: Interface Focus. 4, 6, 20140013.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asymmetric Segregation of Damaged Cellular Components in Spatially Structured Multicellular Organisms
Strandkvist, C., Juul, J. S. & Bendtsen, K. M., 13 Feb 2014, In: PLoS ONE. 9, 2, e87917.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SuperSegger: Robust image segmentation, analysis and lineage tracking of bacterial cells
Stylianidou, S., Brennan, C., Nissen, Silas Boye, Kuwada, N. J. & Wiggins, P. A., 11 Nov 2016, In: Molecular Microbiology. 102, 4, p. 690-700 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemophoresis engine: A general mechanism of ATPase-driven cargo transport
Sugawara, T., Morozov, A. V. (ed.) & Kaneko, Kunihiko, 25 Jul 2022, In: PLOS Computational Biology. 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quadrupolar active stress induces exotic patterns of defect motion in compressible active nematics
Sultan, S. A., Nejad, M. R. & Doostmohammadi, Amin, 7 May 2022, In: Soft Matter. 18, p. 4118-4126 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse
Svenningsen, Mikkel Skjoldan, Svenningsen, Sine Lo, Sørensen, Michael Askvad & Mitarai, Namiko, 2022, In: Life Science Alliance. 5, 2, 9 p., e202101076.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stochastic Bacterial Growth and Survival
Svenningsen, Mikkel Skjoldan, 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 139 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells
Svenningsen, Mikkel Skjoldan, Veress, A., Harms, A., Mitarai, Namiko & Semsey, S., 15 Apr 2019, In: Scientific Reports. 9, 13 p., 6056.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene Expression Changes with Minor Effects on the Population Average Have Major Effects on the Occurrence of Cells with Extreme Protein Concentrations
Svenningsen, Mikkel Skjoldan, Semsey, S. & Mitarai, Namiko, 2019, In: mSphere. 4, 1, p. 1-6 e00575-18.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Commitment to lysogeny is preceded by a prolonged period of sensitivity to the late lytic regulator Q in bacteriophage Λ
Svenningsen, Sine Lo & Semsey, S., 2014, In: Journal of Bacteriology. 196, 20, p. 3582-3588 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Texture of the upper 1000 m in the GRIP and NorthGRIP ice cores
Svensson, Anders, Durand, G., Mathiesen, Joachim, Persson, A. & Dahl-Jensen, Dorthe, 2009, Low Temperature Science Supplement Issue: Physics of Ice Core Records II. Hondoh, T. (ed.). Institute of Low Temperature Science, Hokkaido University, Sapporo Japan, Vol. 68. p. 107-113 7 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Dynamics and stability in prebiotic information integration: an RNA World model from first principles
Szilagyi, A., Konnyu, B. & Czaran, T., 9 Jan 2020, In: Scientific Reports. 10, 1, 11 p., 51.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ecology and evolution in the RNA world dynamics and stability of prebiotic replicator systems
Szilágyi, A., Zachar, I., Scheuring, I., Könnyű, B. & Czárán, T., 2017, In: Life. 7, 4, 48.Research output: Contribution to journal › Review › Research › peer-review
- Published
A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined
Takeuchi, N., Mitarai, Namiko & Kaneko, Kunihiko, 4 Feb 2022, In: Genetics. 220, 2, 9 p., 182.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database
Tang, Q., Ren, W., Wang, J. & Kaneko, Kunihiko, 7 Oct 2022, In: Molecular Biology and Evolution. 39, 10, 13 p., msac197.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast intra-fractional image-guidance with 6D positioning correction reduces delivery uncertainty for stereotactic radiosurgery and radiotherapy
Tarnavski, N., Engelholm, S. A. & Munck af Rosenschöld, P. M., 2 Aug 2016, In: Journal of Radiosurgery and SBRT. 4, 1, p. 15-20Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intermittent dislocation density fluctuations in crystal plasticity from a phase-field crystal model
Tarp, J. M., Angheluta, L., Mathiesen, Joachim & Goldenfeld, N., 31 Dec 2014, In: Physical Review Letters. 113, 26, 265503.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rotation-limited growth of three-dimensional body-centered-cubic crystals
Tarp, J. M. & Mathiesen, Joachim, 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 012409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enforced Scale Selection in Field Theories of Mechanical and Biological Systems
Tarp, J. M., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 50 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Quantitative analysis of single particle trajectories: mean maximal excursion method
Tejedor...[et al.], V., Benichou, O., Voituriez, R. & Oddershede, L. B., 7 Apr 2010, In: Biophysical Journal. 98, 7, p. 1364-1372 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measurement of the spin-forbidden decay rate (3s3d)1D2¿(3s3p)3 P2,1 in 24Mg
Therkildsen, K. T., Jensen, B. B., Ryder, C. P., Malossi, N. & Thomsen, Jan Westenkær, 2009, In: Physical Review A (Atomic, Molecular and Optical Physics). 79, 3, p. 034501 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Activity-induced instabilities of brain organoids
Thijssen, K., Kusters, G. L. A. & Doostmohammadi, Amin, 7 Dec 2021, In: The European Physical Journal E: Soft Matter and Biological Physics. 44, 12, 8 p., 147.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Necking and failure of a particulate gel strand: signatures of yielding on different length scales
Thijssen, Kristian, Liverpool, T. B., Royall, P. C. & Jack, R. L., 2023, In: Soft Matter. 19, 38, p. 7412-7428 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active nematics with anisotropic friction: the decisive role of the flow aligning parameter
Thijssen, K., Metselaar, L., Yeomans, J. M. & Doostmohammadi, Amin, 28 Feb 2020, In: Soft Matter. 16, 8, p. 2065-2074 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Binding self-propelled topological defects in active turbulence
Thijssen, K. & Doostmohammadi, Amin, 13 Oct 2020, In: Physical Review Research. 2, 4, 6 p., 042008.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Is a constant low-entropy process at the root of glycolytic oscillations?
Thoke, H. S., Olsen, L. F., Duelund, L., Stock, R. P., Heimburg, Thomas Rainer & Bagatolli, L. A., Sep 2018, In: Journal of Biological Physics. 44, 3, p. 419-431Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Model Study of the Pressure Build-Up during Subcutaneous Injection
Thomsen, M., Hernandez Garcia, A., Mathiesen, Joachim, Poulsen, Mette Homann, Sørensen, D., Tarnow, L. & Feidenhans'l, Robert Krarup, 14 Aug 2014, In: PLoS ONE. 9, 8, e104054.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Decision Making in Biological Systems
Tian, C., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 188 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases
Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation
Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bifurcation of transition paths induced by coupled bistable systems
Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Monte Carlo Methods Development and Applications in Conformational Sampling of Proteins
Tian, P., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Structure of a functional amyloid protein subunit computed using sequence variation
Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Monte Carlo study of the early steps of functional amyloid formation
Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Robust estimation of diffusion-optimized ensembles for enhanced sampling
Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
What does evolution tell us about the structure of a functional amyloid protein?
Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Oscillations and temporal signalling in cells
Tiana, G., Krishna, S., Pigolotti, S., Jensen, Mogens Høgh & Sneppen, Kim, 2008, In: Physical Biology. 4, 2, p. R1-R17Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of genetic control in the cell: the good and bad of being late
Tiana, G. & Jensen, Mogens Høgh, 28 Sep 2013, In: Philosophical Transactions. Series A : Mathematical, physical, and engineering science. 371, 1999; SI, 20120469.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Forging the flow of the quantum mechanical current in quantum dots
Tighineanu, P., Stobbe, S. & Lodahl, Peter, 2014, Proceedings of the Nonlinear optics and excitation kinetics in semiconductors, Bremen, Germany. Bremen, GermanyResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
probing electric and magnetic vacuum fluctuations with quantum dots
Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 2014, Nonlinear quantum optics : Workshop, Leiden, the Netherlands, 2014. Leiden, NetherlandsResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Unraveling the Mesoscopic Character of Quantum Dots in Nanophotonics
Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 19 Jun 2015, In: Physical Review Letters. 114, 24, 247401.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modelling value bubbles in an attention based economy
Toftdahl Olesen, C. & Sneppen, Kim, 2 Mar 2020, In: European Physical Journal B. 93, 3, 5 p., 36.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Copulas for hydroclimatic analysis: A practice-oriented overview
Tootoonchi, F., Sadegh, M., Härter, Jan Olaf Mirko, Raty, O., Grabs, T. & Teutschbein, C., Mar 2022, In: Wiley Interdisciplinary Reviews: Water. 9, 2, 28 p., 1579.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uni- and multivariate bias adjustment methods in Nordic catchments: Complexity and performance in a changing climate br
Tootoonchi, F., Härter, Jan Olaf Mirko, Todorovic, A., Raty, O., Grabs, T. & Teutschbein, C., 20 Dec 2022, In: Science of the Total Environment. 853, 18 p., 158615.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hierarchy measures in complex networks
Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The unfolded protein response and translation attenuation: a modelling approach.
Trusina, Ala & Tang, C., Oct 2010, In: Diabetes, Obesity and Metabolism Online. 12, p. 27-31Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Functional alignment of regulatory networks: a study of temperate phages
Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stress induced telomere shortening: longer life with less mutations?
Trusina, Ala, 1 Mar 2014, In: B M C Systems Biology. 8, 27.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Translation attenuation mechanism in unfolded protein response
Trusina, Ala, Papa, F. & Tang, C., 1 Dec 2008, Evolution from Cellular to Social Scales. Skjeltorp, A., Skjeltorp, A. & Belushkin, A. (eds.). p. 83-90 8 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Rationalizing translation attenuation in the network architecture of the unfolded protein response
Trusina, Ala, Papa, F. R. & Tang, C., 23 Dec 2008, In: Proceedings of the National Academy of Sciences USA (PNAS). 105, 51, p. 20280-20285Research output: Contribution to journal › Journal article › Research › peer-review
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