Biocomplexity

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  1. Published

    Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation

    Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Bifurcation of transition paths induced by coupled bistable systems

    Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Monte Carlo Methods Development and Applications in Conformational Sampling of Proteins

    Tian, P., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  4. Published

    Structure of a functional amyloid protein subunit computed using sequence variation

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A Monte Carlo study of the early steps of functional amyloid formation

    Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Robust estimation of diffusion-optimized ensembles for enhanced sampling

    Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    What does evolution tell us about the structure of a functional amyloid protein?

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  8. Published

    Oscillations and temporal signalling in cells

    Tiana, G., Krishna, S., Pigolotti, S., Jensen, Mogens Høgh & Sneppen, Kim, 2008, In: Physical Biology. 4, 2, p. R1-R17

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The dynamics of genetic control in the cell: the good and bad of being late

    Tiana, G. & Jensen, Mogens Høgh, 28 Sep 2013, In: Philosophical Transactions. Series A : Mathematical, physical, and engineering science. 371, 1999; SI, 20120469.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Forging the flow of the quantum mechanical current in quantum dots

    Tighineanu, P., Stobbe, S. & Lodahl, Peter, 2014, Proceedings of the Nonlinear optics and excitation kinetics in semiconductors, Bremen, Germany. Bremen, Germany

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  11. Published

    probing electric and magnetic vacuum fluctuations with quantum dots

    Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 2014, Nonlinear quantum optics : Workshop, Leiden, the Netherlands, 2014. Leiden, Netherlands

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  12. Published

    Unraveling the Mesoscopic Character of Quantum Dots in Nanophotonics

    Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 19 Jun 2015, In: Physical Review Letters. 114, 24, 247401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Modelling value bubbles in an attention based economy

    Toftdahl Olesen, C. & Sneppen, Kim, 2 Mar 2020, In: European Physical Journal B. 93, 3, 5 p., 36.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Copulas for hydroclimatic analysis: A practice-oriented overview

    Tootoonchi, F., Sadegh, M., Härter, Jan Olaf Mirko, Raty, O., Grabs, T. & Teutschbein, C., Mar 2022, In: Wiley Interdisciplinary Reviews: Water. 9, 2, 28 p., 1579.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Uni- and multivariate bias adjustment methods in Nordic catchments: Complexity and performance in a changing climate br

    Tootoonchi, F., Härter, Jan Olaf Mirko, Todorovic, A., Raty, O., Grabs, T. & Teutschbein, C., 20 Dec 2022, In: Science of the Total Environment. 853, 18 p., 158615.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Hierarchy measures in complex networks

    Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The unfolded protein response and translation attenuation: a modelling approach.

    Trusina, Ala & Tang, C., Oct 2010, In: Diabetes, Obesity and Metabolism Online. 12, p. 27-31

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Functional alignment of regulatory networks: a study of temperate phages

    Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Stress induced telomere shortening: longer life with less mutations?

    Trusina, Ala, 1 Mar 2014, In: B M C Systems Biology. 8, 27.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Translation attenuation mechanism in unfolded protein response

    Trusina, Ala, Papa, F. & Tang, C., 1 Dec 2008, Evolution from Cellular to Social Scales. Skjeltorp, A., Skjeltorp, A. & Belushkin, A. (eds.). p. 83-90 8 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  21. Published

    Rationalizing translation attenuation in the network architecture of the unfolded protein response

    Trusina, Ala, Papa, F. R. & Tang, C., 23 Dec 2008, In: Proceedings of the National Academy of Sciences USA (PNAS). 105, 51, p. 20280-20285

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Polar jets of swimming bacteria condensed by a patterned liquid crystal

    Turiv, T., Koizumi, R., Thijssen, K., Genkin, M. M., Yu, H., Peng, C., Wei, Q., Yeomans, J. M., Aranson, I. S., Doostmohammadi, Amin & Lavrentovich, O. D., 2 Mar 2020, In: Nature Physics. 16, 4, p. 481-487 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Human T cell responses to Japanese encephalitis virus in health and disease

    Turtle, L., Bali, T., Buxton, G., Chib, S., Chan, S., Soni, M., Hussain, M., Isenman, H., Fadnis, P., Venkataswamy, M. M., Satishkumar, V., Lewthwaite, P., Kurioka, A., Krishna, S., Shankar, M. V., Ahmed, R., Begum, A., Ravi, V., Desai, A., Yoksan, S. & 7 others, Fernandez, S., Willberg, C. B., Kløverpris, Henrik Nyhus, Conlon, C., Klenerman, P., Satchidanandam, V. & Solomon, T., 2016, In: Journal of Experimental Medicine.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    NETWORK INFERENCE WITH HIDDEN UNITS

    Tyrcha, J. & Hertz, John, 1 Feb 2014, In: Mathematical Biosciences and Engineering. 11, 1, p. 149-165

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The effect of nonstationarity on models inferred from neural data

    Tyrcha, J., Roudi, Y. & Hertz, John, 1 Mar 2013, In: Journal of Statistical Mechanics: Theory and Experiment. 2013, P03005.

    Research output: Contribution to journal › Journal article › Research › peer-review

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