Biocomplexity

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  1. 2013
  2. Published

    Replicator dynamics with turnover of players

    Juul, J. S., Kianercy, A., Bernhardsson, S. & Pigolotti, S., 8 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 9 p., 022806.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Rotation-induced grain growth and stagnation in phase-field crystal models

    Bjerre, M., Tarp, J. M., Angheluta, L. & Mathiesen, Joachim, 15 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 4 p., 020401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Concomitance in single bubble sonoluminescence of period doubling in emission and shape distortion

    Levinsen, Mogens, 10 Sep 2013, In: Ultrasonics. 54, 2, p. 637-643

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Fluctuations of systems in finite heat reservoirs with applications to phase transitions in lipid membranes

    Mosgaard, L. D., Jackson, Andrew D. & Heimburg, Thomas Rainer, 25 Sep 2013, In: Journal of Chemical Physics. 139, 12, 125101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The dynamics of genetic control in the cell: the good and bad of being late

    Tiana, G. & Jensen, Mogens Høgh, 28 Sep 2013, In: Philosophical Transactions. Series A : Mathematical, physical, and engineering science. 371, 1999; SI, 20120469.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Deep inspiration breath hold radiotherapy for locally advanced lung cancer: Comparison of different treatment techniques on target coverage, lung dose and treatment delivery time

    Josipovic, Mirjana, Persson, Gitte F., Hakansson, K., Bangsgaard, J. P., Damkjær, S. M., Westman, G., Specht, Lena & Aznar, M. C., 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1582-1586

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Doses to Carotid Arteries After Modern Radiation Therapy for Hodgkin Lymphoma: Is Stroke Still a Late Effect of Treatment?

    Maraldo, M. V., Brodin, N. P., Aznar, M. C., Petersen, P. M., Munck af Rosenschöld, P. M. & Specht, Lena, 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. 297-303

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Experimental observation of shear thickening oscillation

    Nagahiro, S., Nakanishi, H. & Mitarai, Namiko, 1 Oct 2013, In: EPL. 104, 2, 28002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Impact of Treatment Margins and Treatment Technique in Hippocampal Sparing Radiation Therapy for Pediatric Medulloblastoma

    Brodin, N. P., Munck af Rosenschöld, P. M., Berthelsen, A. K., Vogelius, I., Hollensen, C., Blomstrand, M., Bentzen, S. M. & Bjork-Eriksson, T., 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. S595-S595

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Modeling freedom from progression for standard-risk medulloblastoma: a mathematical tumor control model with multiple modes of failure

    Brodin, N. P., Vogelius, I. R., Bjørk-Eriksson, T. & Munck af Rosenschöld, P. M., 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. 422-429

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Reduced lung dose and improved inspiration level reproducibility in visually guided DIBH compared to audio coached EIG radiotherapy for breast cancer patients

    Damkjær, S. M. S., Aznar, M. C., Pedersen, A. N., Vogelius, I. P., Bangsgaard, J. P. & Josipovic, M., 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1458-1463

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The effect on esophagus after different radiotherapy techniques for early stage Hodgkin's lymphoma

    Jørgensen, A., Maraldo, M., Brodin, N. P., Aznar, M. C., Voglius, I. R., Petersen, P. M., Munck af Rosenschöld, P. M. & Specht, Lena, 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1559-1565

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Control of ribosome traffic by position-dependent choice of synonymous codons

    Mitarai, Namiko & Pedersen, Steen, 8 Oct 2013, In: Physical Biology. 10, 5, 056011.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Revealing Hidden Dynamics within Living Soft Matter

    Ott, D., Bendix, Poul Martin & Oddershede, L. B., 11 Oct 2013, In: A C S Nano. 7, 10, p. 8333-8339

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Moderate stem-cell telomere shortening rate postpones cancer onset in a stochastic model

    Holbek, S., Bendtsen, K. M. & Juul, J. S., 21 Oct 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 4, p. 1-7 7 p., 042706.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch

    Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Excitable human dynamics driven by extrinsic events in massive communities

    Mathiesen, Joachim, Angheluta, L., Ahlgren, P. T. H. & Jensen, Mogens Høgh, 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17259-17262

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    "Want to understand the stock market? Just log in to Twitter"

    Mathiesen, Joachim & Angheluta, L., 24 Oct 2013, In: The Conversation.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  20. Published

    The impact of leaf width and plan complexity on DMLC tracking of prostate intensity modulated arc therapy

    Pommer, T., Falk, M., Poulsen, P. R., Keall, P. J., O'Brien, R. T. & Munck af Rosenschöld, P. M., 1 Nov 2013, In: Medical Physics. 40, 11, 111717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Dose escalation to high-risk sub-volumes based on non-invasive imaging of hypoxia and glycolytic activity in canine solid tumors: a feasibility study

    Clausen, Malene Martini, Hansen, A. E., Munck af Rosenschöld, P. M., Kjær, Andreas, Kristensen, Annemarie T., McEvoy, Fintan & Engelholm, S. A., 7 Nov 2013, In: Radiation Oncology. 8, 262.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Foot-and-mouth disease virus serotype O phylodynamics: genetic variability associated with epidemiological factors in Pakistan

    Brito, B. P., Gonzalez-Perez, Alfredo, Jamal, S. M., Belsham, Graham John, Pauszek, S. J., Ahmed, Z. & Rodriguez, L. L., Dec 2013, In: Transboundary and Emerging Diseases. 60, 6, p. 516-24 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Energetics and efficiency of a molecular motor model

    Fogedby, H. C. & Svane, A., 2 Dec 2013, In: Journal of Statistical Mechanics: Theory and Experiment. 2013, P12001.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Complex Langevin dynamics for chiral random matrix theory

    Møllgaard, A. E. & Splittorff, Kim, 9 Dec 2013, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). 88, 11, 12 p., 116007.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Reconstitution of Cholesterol-Dependent Vaginolysin into Tethered Phospholipid Bilayers: Implications for Bioanalysis

    Budvytyte, R., Pleckaityte, M., Zvirbliene, A., Vanderah, D. J. & Valincius, G., 13 Dec 2013, In: PLOS ONE. 8, 12, 13 p., e82536.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Probing the precipitation life cycle by iterative rain cell tracking

    Moseley, C., Berg, P. & Härter, Jan Olaf Mirko, 27 Dec 2013, In: Journal of Geophysical Research: Atmospheres. 118, 24, p. 13361-13370

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. 2014
  28. Published

    Commitment to lysogeny is preceded by a prolonged period of sensitivity to the late lytic regulator Q in bacteriophage Λ

    Svenningsen, Sine Lo & Semsey, S., 2014, In: Journal of Bacteriology. 196, 20, p. 3582-3588 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Disjoint domains interactions framework for hyperelastic simulations

    Bonde, U., Misztal, M. K., Visseq, V. & Erleben, Kenny, 2014. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  30. Published

    Dynamics of Fibril Growth and Feedback Motifs

    Cordsen, P., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 154 p.

    Research output: Book/Report › Ph.D. thesis

  31. Published

    Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes

    Shah, P., Cho, S. K., Thulstrup, Peter Waaben, Bhang, Y., Ahn, J. C., Choi, S. W., Rørvig-Lund, A. & Yang, S. W., 2014, In: Nanotechnology. 25, 4, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Equilibrium simulations of proteins using molecular fragment replacement and NMR chemical shifts

    Boomsma, Wouter, Tian, P., Frellsen, J., Ferkinghoff-Borg, J., Hamelryck, Thomas Wim, Lindorff-Larsen, Kresten & Vendruscolo, M., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 38, p. 13852-13857 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Finite element modeling of the vocal folds with deformable interface tracking

    Granados, A., Brunskog, J., Misztal, M. K., Visseq, V. & Erleben, Kenny, 2014, Forum Acusticum. European Acoustics Association, 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  34. Published

    Force spectroscopy of DNA and RNA: structure and kinetics from single-molecule experiments

    Ettlinger, R. B., Sørensen, Michael Askvad & Oddershede, L. B., 2014, Nucleic Acid Nanotechnology. Springer, Vol. 29. p. 23-52 31 p. (Nucleic Acids and Molecular Biology, Vol. 29).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  35. Published

    Forging the flow of the quantum mechanical current in quantum dots

    Tighineanu, P., Stobbe, S. & Lodahl, Peter, 2014, Proceedings of the Nonlinear optics and excitation kinetics in semiconductors, Bremen, Germany. Bremen, Germany

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  36. Published

    Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method

    Valentin, J., Andreetta, C., Boomsma, Wouter, Bottaro, S., Ferkinghoff-Borg, J., Frellsen, J., Mardia, K. V., Tian, P. & Hamelryck, Thomas Wim, 2014, In: Proteins: Structure, Function, and Bioinformatics. 82, 2, p. 288-299 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Modeling rises and falls in money addicted social hierarchies

    Dybiec, B., Mitarai, Namiko & Sneppen, Kim, 2014, In: Physica Scripta. 89, 8, 085002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Monte Carlo Methods Development and Applications in Conformational Sampling of Proteins

    Tian, P., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis

  39. Published

    Multiphase flow of immiscible fluids on unstructured moving meshes

    Misztal, M. K., Erleben, Kenny, Bargteil, A., Fursund, J., Christensen, B. B., Bærentzen, J. A. & Bridson, R., 2014, In: I E E E Transactions on Visualization and Computer Graphics. 20, 1, p. 4-16 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Oxidative stress and inflammation generated DNA damage by exposure to air pollution particles

    Møller, Peter, Danielsen, P. H., Karottki, D. G., Jantzen, K., Roursgaard, Martin, Klingberg, H., Jensen, Ditte Marie, Christophersen, D. V., Hemmingsen, J. G., Cao, Y. & Loft, Steffen, 2014, In: Mutation Research - Reviews. 762, p. 133-166 34 p.

    Research output: Contribution to journal › Review › Research › peer-review

  41. Published

    Robust estimation of diffusion-optimized ensembles for enhanced sampling

    Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Spatial Models and Networks of Living Systems

    Juul, J. S., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 156 p.

    Research output: Book/Report › Ph.D. thesis

  43. Published

    Spatial Structures and Regulation in Biological Systems

    Yde, Pernille, 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 167 p.

    Research output: Book/Report › Ph.D. thesis

  44. Published

    The Electrical and Dynamical Properties of Biomembranes

    Mosgaard, L. D., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 190 p.

    Research output: Book/Report › Ph.D. thesis

  45. Published

    Thermo-plasmonics of Irradiated Metallic Nanostructures

    Ma, H., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 123 p.

    Research output: Book/Report › Ph.D. thesis

  46. Published

    Time-dependent Taylor-Aris dispersion of an initial point concentration

    Vedel, S., Hovad, E. & Bruus, H., 2014, In: Journal of Fluid Mechanics. 752, p. 107-122 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Toward Larger DNA Origami

    Marchi, A. N., Saaem, I., Vogen, B. N., Brown, Stanley & LaBean, T. H., 2014, In: Nano Letters. 14, 10, p. 5740-5747 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    probing electric and magnetic vacuum fluctuations with quantum dots

    Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 2014, Nonlinear quantum optics : Workshop, Leiden, the Netherlands, 2014. Leiden, Netherlands

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  49. Published

    Effect of supercoiling on the λ switch

    Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 1 Jan 2014, In: Bacteriophage. 4, 2, p. 1-5 5 p., e27517.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Kinetic models of immediate exchange

    Heinsalu, E. & Patriarca, M., 1 Jan 2014, In: European Physical Journal B. Condensed Matter and Complex Systems. 87, 8, 170.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Heat Generation by Irradiated Complex Composite Nanostructures

    Ma, H., Tian, P., Pello, J., Bendix, Poul Martin & Oddershede, L. B., 6 Jan 2014, In: Nano Letters. 14, 2, p. 612-619

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    A supra-cellular model for coupling of bone resorption to formation during remodeling: lessons from two bone resorption inhibitors affecting bone formation differently

    Jensen, P. R., Andersen, T. L., Pennypacker, B. L., Duong, L. T., Engelholm, Lars Henning & Delaissé, J., 10 Jan 2014, In: Biochemical and Biophysical Research Communications. 443, 2, p. 694-9 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Action Potential Collision in Nerves

    Budvytyte, R., Gonzalez-Perez, Alfredo, Mosgaard, L. & Heimburg, Thomas Rainer, 28 Jan 2014, In: Biophysical Society. Annual Meeting. Abstracts. 106, 2, p. 794A-794A

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Are Local Anesthetics and General Anesthetics Different?

    Sasse-Middelhoff, H., Zecchi, K. & Heimburg, Thomas Rainer, 28 Jan 2014, In: Biophysical Society. Annual Meeting. Abstracts. 106, 2, p. 705A-705A

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Collaboration between CpG sites is needed for stable somatic inheritance of DNA methylation states

    Härter, Jan Olaf Mirko, Lövkvist, Cecilia, Dodd, I. B. & Sneppen, Kim, 1 Feb 2014, In: Nucleic Acids Research. 42, 4, p. 2235-2244

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Irregular breathing during 4DCT scanning of lung cancer patients: Is the midventilation approach robust?

    Aznar, M. C., Persson, Gitte F., Kofoed, I. M., Nygaard, D. E. & Korreman, S. S., 1 Feb 2014, In: Physica Medica. 30, 1, p. 69-75

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Modeling positioning uncertainties of prostate cancer external beam radiation therapy using pre-treatment data

    Munck af Rosenschöld, P. M., Desai, N. B., Hun, J., Apte, A., Hunt, M., Kalikstein, A., Mechalakos, J., Happersett, L., Deasy, J. O. & Zelefsky, M. J., 1 Feb 2014, In: Radiotherapy & Oncology. 110, 2, p. 251-255

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    NETWORK INFERENCE WITH HIDDEN UNITS

    Tyrcha, J. & Hertz, John, 1 Feb 2014, In: Mathematical Biosciences and Engineering. 11, 1, p. 149-165

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    THE ROLE OF BILINGUALS IN LANGUAGE COMPETITION

    Heinsalu, E., Patriarca, M. & Leonard, J. L., 1 Feb 2014, In: Advances in Complex Systems. 17, 1, 1450003.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Disturbance accelerates the transition from low- to high-diversity state in a model ecosystem

    Botta, F. & Mitarai, Namiko, 4 Feb 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 89, 2, 022704.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Asymmetric Segregation of Damaged Cellular Components in Spatially Structured Multicellular Organisms

    Strandkvist, C., Juul, J. S. & Bendtsen, K. M., 13 Feb 2014, In: PLoS ONE. 9, 2, e87917.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    A specific assay for quantification of human C4c by use of an anti-C4c monoclonal antibody

    Pilely, K., Skjødt, Mikkel-Ole, Nielsen, C., Andersen, T. E., Louise Aabom, A., Vitved, L., Koch, C., Skjødt, K. & Palarasah, Y., Mar 2014, In: Journal of Immunological Methods. 405, p. 87-96 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Reversible DNA Compaction

    Gonzalez-Perez, Alfredo, 1 Mar 2014, In: Current Topics in Medicinal Chemistry. 14, 6, p. 766-773

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Stress induced telomere shortening: longer life with less mutations?

    Trusina, Ala, 1 Mar 2014, In: B M C Systems Biology. 8, 27.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Optical manipulation of single molecules in the living cell

    Nørregaard, K., Jauffred, Liselotte, Berg-Sørensen, K. & Oddershede, L. B., 10 Mar 2014, In: Physical Chemistry Chemical Physics. 16, 25, p. 12614-12624

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    A Mixed Incoherent Feed-Forward Loop Allows Conditional Regulation of Response Dynamics

    Semsey, S., 12 Mar 2014, In: P L o S One. 9, 3, e91243.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Hippocampal sparing radiotherapy for pediatric medulloblastoma: impact of treatment margins and treatment technique

    Brodin, N. P., af Rosenschold, P. M., Blomstrand, M., Kiil-Berthlesen, A., Hollensen, C., Vogelius, Ivan R. , Lannering, B., Bentzen, S. M. & Bjork-Eriksson, T., Apr 2014, In: Neuro-Oncology. 16, 4, p. 594-602

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Optimizing the radiation therapy dose prescription for pediatric medulloblastoma: Minimizing the life years lost attributable to failure to control the disease and late complication risk

    Brodin, N. P., Vogelius, Ivan R. , Bjork-Eriksson, T., af Rosenschold, P. M., Maraldo, M. V., Aznar, M. C., Specht, Lena & Bentzen, S. M., 1 Apr 2014, In: Acta Oncologica. 53, 4, p. 462-470

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    The impact of involved node, involved field and mantle field radiotherapy on estimated radiation doses and risk of late effects for pediatric patients with Hodgkin lymphoma

    Maraldo, M. V., Jorgensen, M., Brodin, N. P., Aznar, M. C., Vogelius, Ivan R. , Petersen, P. M., Berthelsen, A. K., Christensen, C. B., Hjalgrim, L. L. & Specht, Lena, 1 Apr 2014, In: Pediatric Blood & Cancer. 61, 4, p. 717-722 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Comment on Y. Couder and E. Fort: Single-Particle Diffraction and Interference at a Macroscopic Scale; Phys. Rev. Lett. 97, 154101 (2006)

    Andersen, A., Madsen, J., Reichelt, C., Ahl, S. R., Lautrup, B. E., Ellegaard, Clive Sigurd, Levinsen, Mogens & Bohr, T., 4 Apr 2014, In: arXiv.org: Physics. 1405.0466v1

    Research output: Contribution to journal › Journal article › Research

  71. Published

    Crosstalk elimination in the detection of dual-beam optical tweezers by spatial filtering

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 May 2014, In: Review of Scientific Instruments. 85, 5, 053108.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Sub-diffraction positioning of a two-photon excited and optically trapped quantum dot

    Jauffred, Liselotte, Kyrsting, A. H., Christensen, E. A., Seyyed Reihani, S. N. & Oddershede, L. B., 6 May 2014, In: Nanoscale. 6, 12, p. 6997-7003

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Speciation, diversification, and coexistence of sessile species that compete for space

    Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    The Thermodynamics of General and Local Anesthesia

    Graesboll, K., Sasse-Middelhoff, H. & Heimburg, Thomas Rainer, 20 May 2014, In: Biophysical Journal. 106, 10, p. 2143-2156

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Mutations in Transcriptional Regulators Allow Selective Engineering of Signal Integration Logic

    Semsey, S., 25 May 2014, In: mBio (Print). 5, 3, e01171.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Jamming Transition in Kinetically Constrained Models with Reflection Symmetry

    Ohta, H. & sasa, S., 1 Jun 2014, In: Journal of Statistical Physics. 155, 5, p. 827-842

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Optical Trapping of Nanoparticles and Quantum Dots

    Bendix, Poul Martin, Jauffred, Liselotte, Nørregaard, K. & Oddershede, L. B., 1 Jun 2014, In: IEEE Journal of Selected Topics in Quantum Electronics. 20, 3, 4800112.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Recurrences after intensity modulated radiotherapy for head and neck squamous cell carcinoma more likely to originate from regions with high baseline [18F]-FDG uptake

    Due, A. K., Vogelius, Ivan R. , Aznar, M. C., Bentzen, S. M., Berthelsen, A. K., Korreman, S. S., Loft, A., Kristensen, C. A. & Specht, Lena, 1 Jun 2014, In: Radiotherapy & Oncology. 111, 3, p. 360-365

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Enabling accurate photodiode detection of multiple optical traps by spatial filtering: Optical Trapping and Optical Micromanipulation XI

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 16 Jun 2014, In: Proceedings of S P I E - International Society for Optical Engineering. 9164, p. 916411- 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    The Strength of Friendship Ties in Proximity Sensor Data

    Sekara, V. & Jørgensen, S. L., 7 Jul 2014, In: P L o S One. 9, 7

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Saturation of Shape Instabilities in Single Bubble Sonoluminescence Saturation

    Levinsen, Mogens, 29 Jul 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 90, 1, 013026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    A treatment planning and delivery comparison of volumetric modulated arc therapy with or without flattening filter for gliomas, brain metastases, prostate, head/neck and early stage lung cancer

    Gasic, D., Ohlhues, L., Brodin, N. P., Fog, L. S., Pommer, T., Bangsgaard, J. P. & Munck af Rosenschöld, P. M., 1 Aug 2014, In: Acta Oncologica. 53, 8, p. 1005-1011

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Non-Steady Wall-Bounded Flows of Viscoelastic Fluids Under Periodic Forcing

    Hernandez-Garcia, A., Fernandez Barbero, A. & Sotolongo-Costa, O., 1 Aug 2014, In: Brazilian Journal of Physics. 44, 4, p. 315-325

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Model Study of the Pressure Build-Up during Subcutaneous Injection

    Thomsen, M., Hernandez Garcia, A., Mathiesen, Joachim, Poulsen, Mette Homann, Sørensen, D., Tarnow, L. & Feidenhans'l, Robert Krarup, 14 Aug 2014, In: PLoS ONE. 9, 8, e104054.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Tethered particle analysis of supercoiled circular DNA using peptide nucleic acid handles

    Norregaard, K., Andersson, M., Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., Sep 2014, In: Nature Protocols (Print). 9, 9, p. 2206-23 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Statistics of co-occurring keywords in confined text messages on Twitter

    Mathiesen, Joachim, Angheluta, L. & Jensen, Mogens Høgh, 1 Sep 2014, In: European Physical Journal. Special Topics. 223, 9, p. 1849-1858 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Penetration of Action Potentials During Collision in the Median and Lateral Giant Axons of Invertebrates

    Gonzalez-Perez, Alfredo, Budvytyte, R., Mosgaard, L. D., Nissen, S. & Heimburg, Thomas Rainer, 10 Sep 2014, In: Physical Review X. 4, 3, 031047.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Simultaneous three-dimensional tracking of individual signals from multi-trap optical tweezers using fast and accurate photodiode detection

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 22 Sep 2014, In: Optics Express. 22, 19, p. 23661-23672

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Deep inspiration breath hold radiotherapy of lung cancer: The good, the bad and the ugly case

    Josipovic, Mirjana, Aznar, M. C. & Persson, Gitte F., 1 Oct 2014, In: Acta Oncologica. 53, 10, p. 1446-+

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Injectable Colloidal Gold in a Sucrose Acetate Isobutyrate Gelating Matrix with Potential Use in Radiation Therapy

    Jolck, R. I., Binderup, Tina, Hansen, A. E., Scherman, J. B., Munck af Rosenschöld, P. M., Kjær, Andreas & Andresen, T. L., 1 Oct 2014, In: Advanced Healthcare Materials. 3, 10, p. 1680-1687

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Motion management during IMAT treatment of mobile lung tumors-A comparison of MLC tracking and gated delivery

    Falk, M., Pommer, T., Keall, P., Korreman, S., Persson, Gitte F., Poulsen, P. & Munck af Rosenschöld, P. M., 1 Oct 2014, In: Medical Physics. 41, 10, 101707.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    L-1 regularization for reconstruction of a non-equilibrium Ising model

    Zeng, H. L., Hertz, John & Roudi, Y., 2 Oct 2014, In: Physica Scripta. Topical Issues. 89, 10, 105002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Models of life: Dynamics and regulation in biological systems

    Sneppen, Kim, 5 Oct 2014, Cambridge University Press ed. Cambridge. 342 p.

    Research output: Book/Report › Book › peer-review

  94. Published

    Dynamic operation of optical fibres beyond the single-mode regime facilitates the orientation of biological cells

    Kreysing, M., Ott, D., Schmidberger, M. J., Otto, O., Schuermann, M., Martin-Badosa, E., Whyte, G. & Guck, J., 1 Nov 2014, In: Nature Communications. 5, 5481.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Local and transient permeation events are associated with local melting of giant liposomes

    Andersen, T., Kyrsting, A. H. & Bendix, Poul Martin, 2 Nov 2014, In: Soft Matter. 10, 24, p. 4268-4274

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Phage and bacteria support mutual diversity in a narrowing staircase of coexistence

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 3 Nov 2014, In: I S M E Journal. 28, 11, p. 2317-2326

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Multi-neuronal activity and functional connectivity in cell assemblies

    Roudi, Y., Dunn, B. & Hertz, John, 8 Nov 2014, In: Current Opinion in Neurobiology. 32, p. 38-44

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Dynamics of the DNA repair proteins WRN and BLM in the nucleoplasm and nucleoli

    Bendtsen, K. M., Jensen, M. B., May, A., Rasmussen, Lene Juel, Trusina, Ala, Bohr, Vilhelm & Jensen, Mogens Høgh, 14 Nov 2014, In: European Biophysics Journal. 43, 10-11, p. 509-516

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Nanoscale Phase Behavior on Flat and Curved Membranes

    Andersen, T., Bahadori, Azra, Ott, D., Kyrsting, A. H., Seyyed Reihani, S. N. & Bendix, Poul Martin, 28 Nov 2014, In: Nanotechnology. 25, 50, 505101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    A detection system for an optical manipulation system for manipulating micro-particls or nano-particles of a sample by means of at least two optical traps

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 Dec 2014, Patent No. 70097, 1 Dec 2014

    Research output: Patent

  101. Published

    Fluorescent quantification of size and lamellarity of membrane nanotubes

    Farhangibarooji, Younes, Oddershede, L. B., Seyyed Reihani, S. N. & Bendix, Poul Martin, 2 Dec 2014, In: European Biophysics Journal. 43, 12, p. 595-602

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome

    Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.

    Research output: Contribution to journal › Journal article › Research › peer-review

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