Biocomplexity

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  1. 2014
  2. Published

    A kinetic mechanism for cell sorting based on local variations in cell motility

    Strandkvist, C., Juul, J., Baum, B., Kabla, A. J. & Duke, T., 6 Dec 2014, In: Interface Focus. 4, 6, 20140013.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Long-range ordered vorticity patterns in living tissue induced by cell division

    Rossen, Ninna Struck, Tarp, J. M., Mathiesen, Joachim, Jensen, Mogens Høgh & Oddershede, L. B., 8 Dec 2014, In: Nature Communications. 5, 5720.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Intermittent dislocation density fluctuations in crystal plasticity from a phase-field crystal model

    Tarp, J. M., Angheluta, L., Mathiesen, Joachim & Goldenfeld, N., 31 Dec 2014, In: Physical Review Letters. 113, 26, 265503.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 2015
  6. Published

    Cytoskeletal dynamics

    Bendix, Poul Martin, 2015, Cambridge, Massachusetts, USA

    Research output: Other contribution › Research

  7. Published

    Detailed analysis of the lattice Boltzmann method on unstructured grids

    Misztal, M. K., Hernandez Garcia, A., Matin, R., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Journal of Computational Physics. 297, p. 316-339

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Digital signaling decouples activation probability and population heterogeneity

    Kellogg, R. A., Tian, C., Lipniacki, T., Quake, S. R. & Tay, S., 2015, In: eLife. 4, e08931.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Effect of membrane curvature on lateral distribution of membrane proteins

    Bendix, Poul Martin, 2015

    Research output: Other contribution › Research

  10. Published

    Emergent user behavior on Twitter modelled by a stochastic differential equation

    Møllgaard, A. E. & Mathiesen, Joachim, 2015, In: P L o S One. 10, 5, e0123876.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Enforced Scale Selection in Field Theories of Mechanical and Biological Systems

    Tarp, J. M., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 50 p.

    Research output: Book/Report › Ph.D. thesis › Research

  12. Published

    Helical buckling of actin inside filopodia generates traction

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 2015, In: Proceedings of the National Academy of Sciences USA (PNAS). 112, 1, p. 136-141

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Interferometric detection of single gold nanoparticles calibrated against TEM size distributions

    Zhang, L., Christensen, S., Bendix, Poul Martin, Bhatia, V. K., Loft, Steffen & Stamou, Dimitrios, 2015, In: Small. 11, 29, p. 3550-3555 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Membrane adhesion and phase behavior: I worked with adhesion of membranes to substrates using advances quantitative microscopy techniques. Also, I studied phase behavior of small unilamellar lipid vesicles with respect to their curvature

    Bendix, Poul Martin, 2015, København, Danmark

    Research output: Other contribution › Research

  15. Published

    Membrane dynamics

    Bendix, Poul Martin, 2015

    Research output: Other contribution › Research

  16. Published

    Membrane fusion

    Bendix, Poul Martin, 2015, California, USA

    Research output: Other contribution › Research

  17. Published

    Optical properties of nanoparticles

    Bendix, Poul Martin, 2015, København, Danmark

    Research output: Other contribution › Research

  18. Published

    Photodiode Based Detection for Multiple Trap Optical Tweezers

    Ott, D., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 164 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Physics Based Investigations of DNA Supercoiling and of Plasmonic Nanoparticles for Photothermal Cancer Therapy

    Nørregaard, K., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Ph.D. thesis › Research

  20. Published

    Rotation-limited growth of three-dimensional body-centered-cubic crystals

    Tarp, J. M. & Mathiesen, Joachim, 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 012409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Simulating anomalous dispersion in porous media using the unstructured lattice Boltzmann method

    Misztal, M. K., Hernandez Garcia, A., Matin, R., Müter, D., Jha, D., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Frontiers in Physics. 3, 9 p., 50.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Structure of a functional amyloid protein subunit computed using sequence variation

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    What does evolution tell us about the structure of a functional amyloid protein?

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  24. Published

    Why do bacteria regulate public goods by quorum sensing?-How the shapes of cost and benefit functions determine the form of optimal regulation

    Heilmann, Silja, Krishna, S. & Kerr, B., 2015, In: Frontiers in Microbiology. 6, p. 767

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Unstructured Lattice Boltzmann methods for efficient simulation of flow in complex porous media: EGU General Assembly 2015

    Mathiesen, Joachim, Misztal, M. K., Matin, R. & Hernandez, A., 1 Jan 2015, In: Geophysical Research Abstracts. 17, 5669.

    Research output: Contribution to journal › Conference article › Research › peer-review

  26. Published

    Permeability and Fluid Flow: Presentation at the Phoenix Consortium’s Symposium on Imaging Porous Media and Fluid Flow,

    Misztal, M. K. & Mathiesen, Joachim, 10 Jan 2015, Copenhagen, Denmark

    Research output: Other contribution › Research

  27. Published

    Protein reconstitution into freestanding planar lipid membranes for electrophysiological characterization

    Gutsmann, T., Heimburg, Thomas Rainer, Keyser, U., Mahendran, K. R. & Winterhalter, M., 10 Jan 2015, In: Nature Protocols (Print). 10, 1, p. 188-198

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Comparison of the Photothermal Efficiency of Different Types of Plasmonic Nanoparticles in vitro and in vivo

    Nørregaard, K., Jørgensen, Jesper Tranekjær, Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 171a

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Helical Buckling in Filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 27 Jan 2015, In: Biophysical Journal. 108, 2,Suppl 1, p. 139a-139a

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Membrane Curvature Regulates the Localization of G Protein Coupled Receptors and Ras Isoforms

    Stamou, Dimitrios, Rosholm, K. R., Damalas, A., Hatzakis, Nikos, Wirth, V. F., Martinez, Karen Laurence, Leijnse, Natascha, Oddershede, L. B., Bendix, Poul Martin & Pedersen, S. L., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 95a-96a

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    An updated look at actin dynamics in filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 1 Feb 2015, In: Cytoskeleton. 72, 2, p. 71-79

    Research output: Contribution to journal › Review › Research › peer-review

  32. Published

    Deformation of phospholipid vesicles in an optical stretcher

    Delabre, U., Feld, K., Crespo, E., Whyte, G., Sykes, C., Seifert, U. & Guck, J., 1 Feb 2015, In: Soft Matter. 11, 30, p. 6075-6088

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The influence of flow, shear stress and adhesion molecule targeting on gold nanoparticle uptake in human endothelial cells

    Klingberg, H., Loft, Steffen, Oddershede, L. B. & Møller, Peter, 1 Feb 2015, In: Nanoscale. 7, 26, p. 11409-11419

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Uptake of gold nanoparticles in primary human endothelial cells

    Klingberg, H., Oddershede, L. B., Loeschner, K., Larsen, E. H., Loft, Steffen & Møller, Peter, 1 Feb 2015, In: Toxicology Research. 4, 3, p. 655-666

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Full simulation of chiral random matrix theory at nonzero chemical potential by complex Langevin

    Mollgaard, A. & Splittorff, Kim, 26 Feb 2015, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). 91, 3, 036007.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    PET/CT-guided treatment planning for paediatric cancer patients: a simulation study of proton and conventional photon therapy

    Kornerup, J. S., Brodin, N. P., Bjork-Eriksson, T., Christensen, C. B., Kiil-Berthelsen, A., Aznar, M. C., Hollensen, C., Markova, E. & Af Rosenschold, P. M., 1 Mar 2015, In: British Journal of Radiology. 88, 1047, 20140586.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Spatial patterns of competing random walkers

    Hernandez-Garcia, E., Heinsalu, E. & Lopez, C., 1 Mar 2015, In: Ecological Complexity: An International Journal on Biocomplexity in the Environment and Theoretical Ecology. 21, SI, p. 166-176

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Observation of Motion-Dependent Nonlinear Dispersion with Narrow-Linewidth Atoms in an Optical Cavity

    Westergaard, P. G., Christensen, B. T. R., Tieri, D., Matin, R., Cooper, J., Holland, M., Ye, J. & Thomsen, Jan Westenkær, 4 Mar 2015, In: Physical Review Letters. 114, 9, 093002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    A monomer-trimer model supports intermittent glucagon fibril growth

    Kosmrlj, A., Cordsen, P., Kyrsting, A., Otzen, D., Oddershede, L. B. & Jensen, Mogens Høgh, 11 Mar 2015, In: Scientific Reports. 5, 9005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Statistical precipitation bias correction of gridded model data using point measurements

    Härter, Jan Olaf Mirko, Eggert, B., Moseley, C., Piani, C. & Berg, P., 28 Mar 2015, In: Geophysical Research Letters (Online). 42, 6, p. 1919-1929

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Use of PET/CT instead of CT-only when planning for radiation therapy does not notably increase life years lost in children being treated for cancer

    Kornerup, J. S., Brodin, N. P., Christensen, C. B., Bjork-Eriksson, T., Kiil-Berthelsen, A., Borgwardt, L. & af Rosenschold, P. M., Apr 2015, In: Pediatric Radiology. 45, 4, p. 570-581

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae

    Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies

    Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Cumulants of Hawkes point processes

    Jovanovic, S., Hertz, John & Rotter, S., 7 Apr 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 91, 4, 9 p., 042802.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Minimizing Late Effects for Patients With Mediastinal Hodgkin Lymphoma: Deep Inspiration Breath-Hold, IMRT, or Both?

    Aznar, M. C., Maraldo, M. V., Schut, D. A., Lundemann, M., Brodin, N. P., Vogelius, Ivan R. , Berthelsen, A. K., Specht, Lena & Petersen, P. M., 1 May 2015, In: International Journal of Radiation Oncology, Biology, Physics. 92, 1, p. 169-174

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    A 3 ' External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise

    Lalaouna, D., Carrier, M., Semsey, S., Brouard, J., Wang, J., Wade, J. T. & Masse, E., 7 May 2015, In: Molecular Cell. 58, 3, p. 393-405

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Belief propagation and replicas for inference and learning in a kinetic Ising model with hidden spins

    Battistin, C., Hertz, John, Tyrcha, J. & Roudi, Y., 10 May 2015, In: Journal of Statistical Mechanics: Theory and Experiment. 2015, P05021.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Temporal and spatial scaling impacts on extreme precipitation

    Eggert, B., Berg, P., Härter, Jan Olaf Mirko, Jacob, D. & Moseley, C., 29 May 2015, In: Atmospheric Chemistry and Physics. 15, 10, p. 5957-5971

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Quantification and comparison of visibility and image artifacts of a new liquid fiducial marker in a lung phantom for image-guided radiation therapy

    Rydhog, J. S., Jolck, R. I., Andresen, T. L. & Munck af Rosenschöld, P. M., Jun 2015, In: Medical Physics. 42, 6, p. 2818-2826

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Vesicle Fusion Triggered by Optically Heated Gold Nanoparticles

    Rorvig-Lund, A., Bahadori, Azra, Semsey, S., Bendix, Poul Martin & Oddershede, L. B., 1 Jun 2015, In: Nano Letters. 15, 6, p. 4183-4188

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Voices of chemical biology

    Bertozzi, C. R., Stockwell, B. R., Kubicek, S., Dickinson, B. C., Chang, C. J., Schultz, C., Silver, P. A., Gestwicki, J. E., Chiosis, G., Chattopadhyay, A., Butcher, R. A., Park, S. B., Shoichet, B. K., Flitsch, S. L., Zhang, J., Liu, D. R., Ohnishi, Y., Weerapana, E., Williams, A. H., He, C. & 11 others, Moroni, A., Thiel, G., Chang, Y., Waldmann, H., Bogyo, M., Oddershede, L. B., Christopoulos, A., Imperiali, B., Ehrlich, H., Chen, X. & Prescher, J. A., 1 Jun 2015, In: Nature Chemical Biology. 11, 6, p. 378-379

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Restriction modification systems as engines of diversity

    Sneppen, Kim, Semsey, S., Seshasayee, A. S. N. & Krishna, S., 2 Jun 2015, In: Frontiers in Microbiology. 6, 528.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Well-temperate phage: optimal bet-hedging against local environmental collapses

    Maslov, S. & Sneppen, Kim, 2 Jun 2015, In: Scientific Reports. 5, 10523.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Unraveling the Mesoscopic Character of Quantum Dots in Nanophotonics

    Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 19 Jun 2015, In: Physical Review Letters. 114, 24, 247401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Optical Trapping of Gold Nanoparticles in Air

    Jauffred, Liselotte, Taheri, S. M., Schmitt, R., Linke, H. & Oddershede, L. B., 1 Jul 2015, In: Nano Letters. 15, 7, p. 4713-4719

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Tracking Human Mobility Using WiFi Signals

    Sapiezynski, P., Stopczynski, A., Gatej, R. & Jørgensen, Sune Lehmann, 1 Jul 2015, In: PloS one. 10, 7, 013024.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Two-phase Flow Simulations Using the Lattice Boltzmann Method on Unstructured Grids.

    Misztal, M. K., Matin, R., Hernandez, A. & Mathiesen, Joachim, 1 Jul 2015, 224th International Conference on Discrete Simulation of Fluid Dynamics, 13th-17th July. The Royal Society of Edinburgh ed. Edinburgh

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  58. Published

    Double-slit experiment with single wave-driven particles and its relation to quantum mechanics

    Andersen, A., Madsen, J., Reichelt, C., Ahl, S. R., Lautrup, B. E., Ellegaard, Clive Sigurd, Levinsen, Mogens & Bohr, T., 6 Jul 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 013006.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades

    Hansen, S., Krishna, S., Semsey, S. & Svenningsen, Sine Lo, 17 Jul 2015, In: Scientific Reports. 5, 12186.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    An easy-to-prepare mini-scaffold for DNA origami

    Brown, Stanley, Majikes, J., Martinez, A., Giron, T. M., Fennell, H., Samano, E. C. & LaBean, T. H., 22 Jul 2015, In: Nanoscale. 7, 40, p. 16621-16624

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity

    Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Mechano-capacitive properties of polarized membranes

    Mosgaard, L. D., Zecchi, K. A. & Heimburg, Thomas Rainer, 21 Aug 2015, In: Soft Matter. 11, 40, p. 7899-7910

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Optical trapping of gold aerosols

    Schmitt, R. K., Jauffred, Liselotte, Taheri, S. M., Linke, H. & Oddershede, L. B., 25 Aug 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE - International Society for Optical Engineering, Vol. 9548. 95480F-1

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  64. Published

    Vocal Fold Collision Modeling

    Granados, A., Brunskog, J. & Misztal, M. K., 31 Aug 2015, Proceedings of the 9th International Workshop on Models and Analysis of Vocal Emissions for Biomedical Application: The 11th Pan-European Voice Conference (PEVOC 2015) and the 9th International Workshop on Models and Analysis of Vocal Emissions for Biomedical Application (MAVEBA 2015), 31-8-2015-04-09-2015. Florence, Italy, Vol. 4.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  65. Published

    Diversity Waves in Collapse-Driven Population Dynamics

    Maslov, S. & Sneppen, Kim, 1 Sep 2015, In: P L o S One. 11, 9, e1004440.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    The role of mRNA and protein stability in the function of coupled positive and negative feedback systems in eukaryotic cells

    Bendtsen, K. M., Jensen, Mogens Høgh, Krishna, S. & Semsey, S., 14 Sep 2015, In: Scientific Reports. 5, 13910.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Temporal fidelity in dynamic social networks

    Stopczynski, A., Sapiezynski, P., Pentland, A. '. & Jørgensen, Sune Lehmann, 7 Oct 2015, In: European Physical Journal B. Condensed Matter and Complex Systems. 88, 10

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Dynamic buckling of actin within filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 21 Oct 2015, In: Communicative & Integrative Biology. 8, 2, p. e1022010

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    The length distribution of frangible biofilaments

    Michaels, T. C. T., Yde, Pernille, Willis, J. C. W., Jensen, Mogens Høgh, Otzen, D., Dobson, C. M., Buell, A. K. & Knowles, T. P. J., 28 Oct 2015, In: Journal of Chemical Physics. 143, 16

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Evaluation of the Unstructured Lattice Boltzmann Method in Porous Flow Simulations

    Misztal, M. K., Matin, R., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.

    Research output: Contribution to conference › Conference abstract for conference › Research

  71. Published

    Simulating Anomalous Dispersion and Multiphase Segregation in Porous Media with the Lattice Boltzmann Method

    Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.

    Research output: Contribution to conference › Conference abstract for conference › Research

  72. Published

    Schelling model of cell segregation based only on local information

    Nielsen, Alexander Valentin, Gade, A. L., Juul, J. & Strandkvist, C., 4 Nov 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 5, 052705.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    The Effect of the Nonlinearity of the Response of Lipid Membranes to Voltage Perturbations on the Interpretation of Their Electrical Properties. A New Theoretical Description

    Mosgaard, L. D., Zecchi, K. A., Heimburg, Thomas Rainer & Budvytyte, R., Dec 2015, In: Membranes. 5, 4, p. 495-512

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Disparate metabolic response to fructose feeding between different mouse strains

    Montgomery, M. K., Fiveash, C. E., Braude, J. P., Osborne, Brenna, Brown, Stanley, Mitchell, T. W. & Turner, N., 22 Dec 2015, In: Scientific Reports. 5, 18474.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. 2016
  76. Published

    A Monte Carlo study of the early steps of functional amyloid formation

    Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    A cross-immunization model for the extinction of old influenza strains

    Uekermann, F. & Sneppen, Kim, 2016, In: Scientific Reports. 6, 8 p., 25907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Dynamics of membrane nanotubes coated with I-BAR

    Farhangibarooji, Younes, Rørvig-Lund, A., Semsey, S., S. Reihani, S. N. & Bendix, Poul Martin, 2016, In: Scientific Reports. 6, 30054.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    From Pore Scale to Turbulent Flow with the Unstructured Lattice Boltzmann Method

    Matin, R., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  80. Published

    Fusion of Selected Cells and Vesicles Mediated by Optically Trapped Plasmonic Nanoparticles

    Bahadori, Azra, 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 161 p.

    Research output: Book/Report › Ph.D. thesis › Research

  81. Published

    Human T cell responses to Japanese encephalitis virus in health and disease

    Turtle, L., Bali, T., Buxton, G., Chib, S., Chan, S., Soni, M., Hussain, M., Isenman, H., Fadnis, P., Venkataswamy, M. M., Satishkumar, V., Lewthwaite, P., Kurioka, A., Krishna, S., Shankar, M. V., Ahmed, R., Begum, A., Ravi, V., Desai, A., Yoksan, S. & 7 others, Fernandez, S., Willberg, C. B., Kløverpris, Henrik Nyhus, Conlon, C., Klenerman, P., Satchidanandam, V. & Solomon, T., 2016, In: Journal of Experimental Medicine.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Inflammation: Modelling function and failure of the innate immune system

    Holst-Hansen, T., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  83. Published

    Information Spreading in Epidemics and in Communication Networks

    Uekermann, F. P., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  84. Published

    Mathematical models of human behavior

    Møllgaard, A. E., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  85. Published

    Nucleation and spreading of a heterochromatic domain in fission yeast

    Obersriebnig, M. J., Pallesen, E. M. H., Sneppen, Kim, Trusina, Ala & Thon, Genevieve, 2016, In: Nature Communications. 7, 11 p., 11518.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Numerical simulations and mathematical models of flows in complex geometries: From laminar to turbulent regimes

    Hernandez Garcia, A., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  87. Published

    On polarization in biomembranes

    Zecchi, K. A., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  88. Published

    Reduction of Cheddar cheese ripening time through the addition of glucose

    Møller, C. O. D. A., Czárán, T. L., Christensen, B. B., Siegumfeldt, Henrik & Rattray, F. P., 2016.

    Research output: Contribution to conference › Poster › Research

  89. Published

    Scale selection in columnar jointing: insights from experiments on cooling stearic acid and numerical simulations

    Christensen, A., Raufaste, C., Misztal, M. K., Celestini, F., Guidi, M., Ellegaard, Clive Sigurd & Mathiesen, Joachim, 2016, In: Journal of Geophysical Research: Solid Earth. 121, 3, p. 1462-1482 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Single Particle and PET-based Platform for Identifying Optimal Plasmonic Nano-Heaters for Photothermal Cancer Therapy

    Jørgensen, Jesper Tranekjær, Nørregaard, K., Tian, P., Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 2016, In: Scientific Reports. 6, 10 p., 30076.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Stabilization of epigenetic states of CpG islands by local cooperation

    Sormani, G., Härter, Jan Olaf Mirko, Lövkvist, Cecilia & Sneppen, Kim, 2016, In: Molecular BioSystems. 12, 7, p. 2142-2146

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    tN-Ras, Synaptotagmin1 C2Ab, Annexinb12 and Amphiphysin NBAR can Discriminate Spherical from Cylindrical Membrane Curvature

    kpl171, kpl171, Larsen, J., Rosholm, K. R., Pedersenb, S. L., Munch, H. K., Tkach, Vadym, Sakon, J. J., Bjornholm, T., Weninger, K. R., Bendix, Poul Martin, Jensen, Knud Jørgen, Uline, M. J., Hatzakis, Nikos & Stamou, Dimitrios, 2016, In: Biophysical Journal. 110, 3, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  93. Published

    Injectable silver nanosensors: in vivo dosimetry for external beam radiotherapy using positron emission tomography

    Christensen, A. N., Rydhög, J. S., Søndergaard, R. V., Andresen, T. L., Holm, S., Munck af Rosenschöld, P. M., Conradsen, K. & Jølck, R. I., 8 Jan 2016, In: Nanoscale. 8, 21, p. 11002-11011

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Food Web Assembly Rules for Generalized Lotka-Volterra Equations

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, Feb 2016, In: PLoS Computational Biology. 12, 2, e1004727.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Short-range growth inhibitory signals from the epithelium can drive non-stereotypic branching in the pancreas

    Dahl-Jensen, Svend Bertel, Figueiredo-Larsen, E. M., Botton, A. & Sneppen, Kim, 23 Feb 2016, In: Physical Biology. 13, 1, 016007.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Optical quantification of forces at play during stem cell differentiation

    Ritter, C., Brickman, Joshua Mark & Oddershede, L. B., 4 Mar 2016, In: Proceedings of S P I E - International Society for Optical Engineering. 9764, UNSP 97640J.

    Research output: Contribution to journal › Conference article › Research › peer-review

  97. Published

    Three is much more than two in coarsening dynamics of cyclic competitions

    Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    A dosimetric comparison of real-time adaptive and non-adaptive radiotherapy: A multi-institutional study encompassing robotic, gimbaled, multileaf collimator and couch tracking

    Colvill, E., Booth, J., Nill, S., Fast, M., Bedford, J., Oelfke, U., Nakamura, M., Poulsen, P., Worm, E., Hansen, R., Ravkilde, T., Rydhog, J. S., Pommer, T., Munck af Rosenschöld, P. M., Lang, S., Guckenberger, M., Groh, C., Herrmann, C., Verellen, D., Poels, K. & 5 others, Wang, L., Hadsell, M., Sothmann, T., Blanck, O. & Keall, P., 1 Apr 2016, In: Radiotherapy & Oncology. 119, 1, p. 159-165

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage lambda and Escherichia coli

    Mitarai, Namiko, Brown, Stanley & Sneppen, Kim, 11 Apr 2016, In: Journal of Bacteriology. 198, 12, p. 1783-1793

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Diffusion retardation by binding of tobramycin in an alginate biofilm model

    Cao, B., Christophersen, L., Kolpen, Mette, Jensen, Peter Østrup, Sneppen, Kim, Høiby, Niels, Moser, Claus Ernst & Sams, T., 21 Apr 2016, In: P L o S One. 11, 4, 11 p., e0153616.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    The Dynamics of Initiative in Communication Networks

    Mollgaard, A. & Mathiesen, Joachim, 28 Apr 2016, In: PLOS ONE. 11, 4, e0154442.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    Nanog, Oct4 and Tet1 interplay in establishing pluripotency

    Olariu, V., Lövkvist, Cecilia & Sneppen, Kim, 5 May 2016, In: Scientific Reports. 6, 25438.

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Bioinspired Materials for Water Purification

    Gonzalez-Perez, Alfredo & Persson, K. M., Jun 2016, In: Materials Transactions. 9, 6, 447.

    Research output: Contribution to journal › Journal article › Research › peer-review

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