Biocomplexity

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  1. Published

    Quantification of nano-scale intermembrane contact areas using fluorescence resonance energy transfer

    Bendix, Poul Martin, Pedersen, M. S. & Stamou, Dimitrios, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 30, p. 12341-12346 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Quantification of protein dynamics in nanotubes pulled from transfected cell-derived vesicles

    Moreno Pescador, Guillermo Sergio, Florentsen, C., Østbye, H., Sønder, S. L., Boye, T. L., Veje, E. L., Semsey, S., Nylandsted, J., Daniels, R. & Bendix, Poul Martin, 20 Jul 2019, In: European Biophysics Journal. 48, Suppl. 1, p. S159-S159

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  3. Published

    Quantifying Force and Viscoelasticity Inside Living Cells Using an Active-Passive Calibrated Optical Trap

    Ritter, C. M., Mas, J., Oddershede, L. & Berg-Sørensen, K., 20 Mar 2017, In: Methods in molecular biology (Clifton, N.J.). 1486, p. 513-536 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Quantifying and pinpointing sources of noise in optical tweezers experiments

    Czerwinski, F., Richardson, A. C., Selhuber-Unkel, C. & Oddershede, L. B., 2009, Proceedings of SPIE, vol.7400, San Diego: Optical Trapping and Optical Micromanipulation VI. SPIE - International Society for Optical Engineering, Vol. 7400. p. 740004-740009 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  5. Published

    Quantifying how DNA stretches, melts and changes twist under tension

    Gross, P., Laurens, N., Oddershede, L. B., Bockelmann, U., Peterman, E. J. G. & Wuite, G. J. L., 1 Sep 2011, In: Nature Physics. 7, 9, p. 731-736

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Quantifying noise in optical tweezers by Allan Variance

    Czerwinski, F., Richardson, A. C. & Oddershede, L. B., 2009, In: Optics Express. 17, 15, p. 13255-13269 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Quantifying the benefits of translation regulation in the unfolded protein response

    Axelsen, J. B. & Sneppen, Kim, 1 Oct 2004, In: Physical Biology. 1, 3, p. 159-165 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Quantitative analysis of single particle trajectories: mean maximal excursion method

    Tejedor...[et al.], V., Benichou, O., Voituriez, R. & Oddershede, L. B., 7 Apr 2010, In: Biophysical Journal. 98, 7, p. 1364-1372 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Quantitative approach to small-scale nonequilibrium systems

    Dreyer, J. K., Berg-Sørensen, K. & Oddershede, L., 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 73, 5 Pt 1, p. 051110

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Quantitative determination of optical trapping strength and viscoelastic moduli inside living cells

    Soler, J. M., Richardson, A. C., Seyyed Reihani, S. N., Oddershede, L. B. & Berg-Sørensen, K., 1 Aug 2013, In: Physical Biology. 10, 4, 046006.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Quantitative force calibration in viscoelastic media and living cells: 32nd Congress of the Federation of European Biochemical Societies. July 07-12 Vienna, Austria

    Berg-Sørensen, K., Fischer, M., Richardson, A. C., Seyyed Reihani, S. N. & Oddershede, L. B., 2008, In: FEBS Journal. 274, Suppl. 1, p. 299-299

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Quantitative optical trapping of single gold nanorods

    Selhuber-Unkel, C., Zins, I., Schubert, O., Soennichsen, C. & Oddershede, L. B., 2008, In: Nano Letters. 8, 9, p. 2998-3003

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Quantum dots as handles for optical manipulation

    Jauffred, Liselotte, Sletmoen, M., Czerwinski, F. & Oddershede, L. B., 27 Aug 2010, In: Proceedings of SPIE, the International Society for Optical Engineering. 7762

    Research output: Contribution to journal › Conference article › Research › peer-review

  14. Published

    RBS analysis of diffusion and evaporation of implanted lead in aluminium

    Yu, L. D., Steenstrup, S., Johansen, A., Johnson, Erik, Sarholt-Kristensen, L. & Bourdelle, K. K., 1992, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. B64, p. 78-82

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    REACTION (DPOL, HE-2) AT INTERMEDIATE ENERGIES

    Ellegaard, Clive Sigurd, GAARDE, C., JORGENSEN, T., LARSEN, J., GOODMAN, C., BERGQVIST, I., BROCKSTEDT, A., EKSTROM, P., BEDJIDIAN, M., CONTARDO, D., GROSSIORD, J., GUICHARD, A., BACHELIER, D., BOYARD, J., HENNINO, T., JOURDAIN, J., ROYSTEPHAN, M., RADVANYI, P. & TINSLEY, J., 31 Aug 1987, In: Physical Review Letters. 59, 9, p. 974-977

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Random matrix theory and acoustic resonances in plates with an approximate symmetry

    Andersen, A., Ellegaard, Clive Sigurd, Jackson, Andrew D. & Schaadt, K., 1 Jun 2001, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 63, 6, 066204.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases

    Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Rationalizing translation attenuation in the network architecture of the unfolded protein response

    Trusina, Ala, Papa, F. R. & Tang, C., 23 Dec 2008, In: Proceedings of the National Academy of Sciences USA (PNAS). 105, 51, p. 20280-20285

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Real-time particle tracking at 10,000 fps using optical fiber illumination

    Otto, O., Czerwinski, F., Gornall, J. L., Stober, G., Oddershede, L. B., Seidel, R. & Keyser, U. F., 12 Oct 2010, In: Optics Express. 18, 22, p. 22722-22733 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Real-time redox measurements during endoplasmic reticulum stress reveal interlinked protein folding functions

    Merksamer, P., Trusina, Ala & Papa, F., 20 Nov 2008, In: Cell. 135, 5, p. 933-947

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Reconstitution of Cholesterol-Dependent Vaginolysin into Tethered Phospholipid Bilayers: Implications for Bioanalysis

    Budvytyte, R., Pleckaityte, M., Zvirbliene, A., Vanderah, D. J. & Valincius, G., 13 Dec 2013, In: PLOS ONE. 8, 12, 13 p., e82536.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Reconstructing SPECT images using the Maximum Entropy Principle and including the Effect of Collimation

    Steenstrup, S., 1991, In: Physica Medica. 3-4/VI, p. 273-277

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Recurrences after intensity modulated radiotherapy for head and neck squamous cell carcinoma more likely to originate from regions with high baseline [18F]-FDG uptake

    Due, A. K., Vogelius, Ivan R. , Aznar, M. C., Bentzen, S. M., Berthelsen, A. K., Korreman, S. S., Loft, A., Kristensen, C. A. & Specht, Lena, 1 Jun 2014, In: Radiotherapy & Oncology. 111, 3, p. 360-365

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Reduced lung dose and improved inspiration level reproducibility in visually guided DIBH compared to audio coached EIG radiotherapy for breast cancer patients

    Damkjær, S. M. S., Aznar, M. C., Pedersen, A. N., Vogelius, I. P., Bangsgaard, J. P. & Josipovic, M., 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1458-1463

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Reduction of Cheddar cheese ripening time through the addition of glucose

    Møller, C. O. D. A., Czárán, T. L., Christensen, B. B., Siegumfeldt, Henrik & Rattray, F. P., 2016.

    Research output: Contribution to conference › Poster › Research

  26. Published

    Regime Shifts in a Phage-Bacterium Ecosystem and Strategies for Its Control

    Maslov, S. & Sneppen, Kim, 1 Nov 2019, In: mSystems. 5, 4(6), e00470-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Regulatory genes

    Semsey, S. & Adhya, S., 2013, Brenner’s online encyclopedia of genetics (Second edition). Maloy, S. & Hughes, K. (eds.). Academic Press, 119 p. 4

    Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research › peer-review

  28. Published

    Reinforced communication and social navigation generate groups in model networks

    Rosvall, M. & Sneppen, Kim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 2, Part 2, p. 026111

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Relation of intracellular signal levels and promoter activities in the gal regulon of escherichia coli

    Krishna, S., Orosz, L., Sneppen, Kim, Adhya, S. & Semsey, S., 2009, In: Journal of Molecular Biology. 391, 4, p. 671-678

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Remotely controlled fusion of selected vesicles and living cells

    Bahadori, Azra, Rørvig-Lund, A., Semsey, S., Oddershede, L. B. & Bendix, Poul Martin, 15 Dec 2017, In: Proceedings of SPIE. 9922, p. 992211-1

    Research output: Contribution to journal › Conference article › Research › peer-review

  31. Published

    Remotely controlled fusion of selected vesicles and living cells: a key issue review

    Bahadori, Azra, Moreno Pescador, Guillermo Sergio, Oddershede, L. B. & Bendix, Poul Martin, 25 Jan 2018, In: Reports on Progress in Physics. 81, 3, 26 p., 032602.

    Research output: Contribution to journal › Review › Research › peer-review

  32. Published

    Replicator dynamics with turnover of players

    Juul, J. S., Kianercy, A., Bernhardsson, S. & Pigolotti, S., 8 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 9 p., 022806.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Reply to "Comment on 'Penetration of Action Potentials During Collision in the Median and Lateral Giant Axons of Invertebrates'"

    Wang, T., Gonzalez-Perez, Alfredo, Budvytyte, R., Jackson, Andrew D. & Heimburg, Thomas Rainer, 24 Apr 2017, In: Physical Review X. 7, 2, 028002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Repression of the lysogenic PR promoter in bacteriophage TP901-1 through binding of a CI-MOR complex to a composite OM-OR operator

    Pedersen, M., Neergaard, J. T., Cassias, J., Rasmussen, K. K., Lo Leggio, Leila, Sneppen, Kim, Hammer, K. & Kilstrup, M., 26 May 2020, In: Scientific Reports. 10, 1, 13 p., 8659.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Repressor lattice: feedback, commensurability, and dynamical frustration

    Jensen, Mogens Høgh, Krishna, S. & Pigolotti, S., 2009, In: Physical Review Letters. 103, 11, p. 118101

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Resonant energy transfer in Bose-Einstien condensates

    Nicolin, A., Jensen, Mogens Høgh, Thomsen, Jan Westenkær & Carretero-Gonxález, R., 2008, In: Physica D : Non-linear Phenomena. 237, 19, p. 2476-2481

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Response varibility in balanced cortical networks

    Lerchner..[et al.], A., Ursta, C. & Hertz, John, 2006, In: Neural Computation. 18, 3, p. 634-659

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Restriction modification systems as engines of diversity

    Sneppen, Kim, Semsey, S., Seshasayee, A. S. N. & Krishna, S., 2 Jun 2015, In: Frontiers in Microbiology. 6, 528.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Revealing Hidden Dynamics within Living Soft Matter

    Ott, D., Bendix, Poul Martin & Oddershede, L. B., 11 Oct 2013, In: A C S Nano. 7, 10, p. 8333-8339

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Reversible DNA Compaction

    Gonzalez-Perez, Alfredo, 1 Mar 2014, In: Current Topics in Medicinal Chemistry. 14, 6, p. 766-773

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Ribosome collisions and Translation efficiency: Optimization by codon usage and mRNA destabilization

    Mitarai, Namiko, Sneppen, Kim & Pedersen, Steen, 2008, In: Journal of Molecular Biology. 382, 1, p. 236-245 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Risk-based optimization of photon and proton radiotherapy for pediatric medulloblastoma

    Brodin, N. P., 2013, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 45 p.

    Research output: Book/Report › Ph.D. thesis › Research

  43. Published

    Roadmap for optical tweezers

    Volpe, G., Maragò, O. M., Rubinsztein-Dunlop, H., Pesce, G., Stilgoe, A. B., Volpe, G., Tkachenko, G., Truong, V. G., Chormaic, S. N., Kalantarifard, F., Elahi, P., Käll, M., Callegari, A., Marqués, M. I., Neves, A. A. R., Moreira, W. L., Fontes, A., Cesar, C. L., Saija, R., Saidi, A. & 63 others, Beck, P., Eismann, J. S., Banzer, P., Fernandes, T. F. D., Pedaci, F., Bowen, W. P., Vaippully, R., Lokesh, M., Roy, B., Thalhammer-Thurner, G., Ritsch-Marte, M., García, L. P., Arzola, A. V., Castillo, I. P., Argun, A., Muenker, T. M., Vos, B. E., Betz, T., Cristiani, I., Minzioni, P., Reece, P. J., Wang, F., McGloin, D., Ndukaife, J. C., Quidant, R., Roberts, R. P., Laplane, C., Volz, T., Gordon, R., Hanstorp, D., Marmolejo, J. T., Bruce, G. D., Dholakia, K., Li, T., Brzobohatý, O., Simpson, S. H., Zemánek, P., Ritort, F., Roichman, Y., Bobkova, V., Wittkowski, R., Denz, C., Pavan Kumar, G. V., Foti, A., Donato, M. G., Gucciardi, P. G., Gardini, L., Bianchi, G., Kashchuk, A. V., Capitanio, M., Paterson, L., Jones, P. H., Berg-Sørensen, K., Farhangibarooji, Younes, Oddershede, L. B., Pouladian, P., Preece, D., Adiels, C. B., De Luca, A. C., Magazzù, A., Ciriza, D. B., Iatì, M. A. & Swartzlander, G. A., Apr 2023, In: Journal of Physics-Photonics. 5, 2, 136 p., 022501.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Robust estimation of diffusion-optimized ensembles for enhanced sampling

    Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Role of HU in regulation of gal promoters: chapter 17 in Bacterial chromatin p.395-417, eds: C. Dorman and R.Dame

    Lewis...[et al.], D. E. A., Lee, S. J. & Semsey, S., 1 Dec 2010, Tyskland: Springer Science+Business Media. 22 p.

    Research output: Book/Report › Book › Research › peer-review

  46. Published

    Rotation-induced grain growth and stagnation in phase-field crystal models

    Bjerre, M., Tarp, J. M., Angheluta, L. & Mathiesen, Joachim, 15 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 4 p., 020401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Rotation-limited growth of three-dimensional body-centered-cubic crystals

    Tarp, J. M. & Mathiesen, Joachim, 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 012409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Roughening of fracture surfaces: The role of plastic deformation

    Bouchbinder, E., Mathiesen, Joachim & Procaccia, I., 18 Jun 2004, In: Physical Review Letters. 92, 24, 246101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    SARS-CoV-2 superspreading in cities vs the countryside

    Eilersen, Andreas Thomas & Sneppen, Kim, 23 Feb 2021, In: A P M I S. Acta Pathologica, Microbiologica et Immunologica Scandinavica. 129, 7, p. 401-407 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    SINGLE-NEUTRON STATES AT HIGH SPINS IN YTTERBIUM NUCLEI - EVIDENCE FOR THE QUENCHING OF STATIC NEUTRON PAIR CORRELATIONS

    BACELAR, J., DIEBEL, M., Ellegaard, Clive Sigurd, GARRETT, J., Hagemann, G. B., HERSKIND, B., HOLM, A., YANG, C., ZHANG, J., TJOM, P. & LISLE, J., 1 Apr 1985, In: Nuclear Physics A: Nuclear and Hadronic Physics. 442, 3, p. 509-546

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    SPES4-pi: installation for exclusive study of nuclear reactions

    Alkhazov, GD., Astashin, VV., Atamanchuk, AG., Augustyniak, W., Bachelier, D., Baublis, VV., Boivin, M., Boyard, JL., Clavelin, JF., Courtat, P., Denoit, M., Douet, R., Ellegaard, C., Farhi, L., Gaarde, C., Gacougnolle, R., Gerzenstein, VY., Golovtsov, VL., Golubev, VV., Hennino, T. & 31 others, Jourdain, J., Khanzadeev, A., Komkov, B., Kravtsov, A., Kudin, L., Kunne, R., Larsen, J., Lebon, S., Malinina, L., Maroni, A., Martin, J., Morsch, H., Mylnikov, V., Orischin, E., Osterlund, M., Poux, V., Prokofiev, A., Radvanyi, P., Ramstein, B., Razmyslovich, B., Roy-Stephan, M., Samsonov, V., Skowron, R., Smirnov, I., Strokovsky, E., Tkach, I., Vikhrov, V., Volkov, S., Vorobyov, A., Zhdanov, A. & Zupranski, P., 11 Oct 2005, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 551, 2-3, p. 290-311

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    SPIN STRUCTURE OF THE DELTA-EXCITATION

    Ellegaard, Clive Sigurd, GAARDE, C., JORGENSEN, T., LARSEN, J., MILLION, B., GOODMAN, C., BROCKSTEDT, A., EKSTROM, P., OSTERLUND, M., BEDJIDIAN, M., CONTARDO, D., BACHELIER, D., BOYARD, J., HENNINO, T., JOURDAIN, J., ROYSTEPHAN, M., RADVANYI, P. & ZUPRANSKI, P., 16 Nov 1989, In: Physics Letters B: Particle Physics, Nuclear Physics and Cosmology. 231, 4, p. 365-369

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    STUDY OF DECAY AND ABSORPTION OF THE DELTA-RESONANCE IN NUCLEI WITH A 4-PI DETECTOR

    HENNINO, T., RAMSTEIN, B., BACHELIER, D., BOHLEN, HG., BOYARD, JL., ELLEGAARD, C., GAARDE, C., GOSSET, J., JOURDAIN, JC., LARSEN, JS., LEMAIRE, MC., LHOTE, D., MORSCH, HP., OSTERLUND, M., POITOU, J., RADVANYI, P., ROYSTEPHAN, M., SAMS, T., SNEPPEN, K., VALETTE, O. & 1 others, ZUPRANSKI, P., 4 Jun 1992, In: Physics Letters B: Particle Physics, Nuclear Physics and Cosmology. 283, 1-2, p. 42-46

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    STUDY OF HIGH-SPIN HOLE STATES IN ND-143

    LOVHOIDEN, G., ELKAZZAZ, S., LIEN, J., HEYDE, K., REKSTAD, J., Ellegaard, Clive Sigurd, BJERREGAARD, J., KNUDSEN, P. & KLEINHEINZ, P., 25 Apr 1988, In: Nuclear Physics A: Nuclear and Hadronic Physics. 481, 1, p. 71-80

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    STUDY OF THE DELTA-ISOBAR EXCITATION IN NUCLEI WITH THE (HE-3,T) REACTION

    CONTARDO, D., BEDJIDIAN, M., GROSSIORD, JY., GUICHARD, A., HAROUTUNIAN, R., PIZZI, JR., ELLEGAARD, C., GAARDE, C., LARSEN, JS., GOODMAN, C., BERGQVIST, I., BROCKSTEDT, A., CARLEN, L., EKSTROM, P., BACHELIER, D., BOYARD, JL., HENNINO, T., JOURDAIN, JC., ROYSTEPHAN, M., BOIVIN, M. & 1 others, RADVANYI, P., 13 Mar 1986, In: Physics Letters B: Particle Physics, Nuclear Physics and Cosmology. 168, 4, p. 331-335

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Sall4 and Myocd Empower Direct Cardiac Reprogramming From Adult Cardiac Fibroblasts After Injury

    Zhao, H., Zhang, Y., sgk681, sgk681, Sun, Q., Yang, C., Wang, H., Yang, J., Yang, Y., Yang, X., Liu, Y. & Zhao, Y., 26 Feb 2021, In: Frontiers in Cell and Developmental Biology. 9, 13 p., 608367.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Sand ripples under water with complex wave motion

    Scheibye-Knudsen, K., Ellegaard, Clive Sigurd, Bundgaard, F. & Sams, T., 1 Jul 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 72, 1, 016209.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Saturation of Shape Instabilities in Single Bubble Sonoluminescence Saturation

    Levinsen, Mogens, 29 Jul 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 90, 1, 013026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Scale selection in columnar jointing: insights from experiments on cooling stearic acid and numerical simulations

    Christensen, A., Raufaste, C., Misztal, M. K., Celestini, F., Guidi, M., Ellegaard, Clive Sigurd & Mathiesen, Joachim, 2016, In: Journal of Geophysical Research: Solid Earth. 121, 3, p. 1462-1482 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Scaling exponent of the maximum growth probability in diffusion-limited aggregation

    Jensen, Mogens Høgh, Mathiesen, Joachim & Procaccia, I., 1 Jan 2003, In: Physical Review E. 67, 4, 1 p., 042402.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Scaling properties of European research units

    Jamtveit, B., Jettestuen, E. & Mathiesen, Joachim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 32, p. 13160-13163 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Schelling model of cell segregation based only on local information

    Nielsen, Alexander Valentin, Gade, A. L., Juul, J. & Strandkvist, C., 4 Nov 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 5, 052705.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Segregation in water-based stable single-bubble sonoluminescence

    Levinsen, Mogens, 13 Jan 2012, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 85, 1, Part 2, p. 016309 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Selection by pairwise comparisons with limited resources

    Laureti, P., Mathiesen, Joachim & Zhang, Y. C., 15 Jul 2004, In: Physica A: Statistical Mechanics and its Applications. 338, 3-4, p. 596-604 9 p.

    Research output: Contribution to journal › Review › Research › peer-review

  65. Published

    Self-assembling drugs: A new therapeutic strategy

    Hassan, N., Ruso, J. M. & Gonzalez-Perez, Alfredo, 3 May 2011, In: Soft Matter. 7, 11, p. 5194-5199 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Self-assembly based on hydrotropic counterion - Single-chain amphiphile ion pairs

    Rosholm, K. R., Gonzalez-Perez, Alfredo & Mouritsen, Ole G., 1 Oct 2010, In: Colloid and Polymer Science. 288, 14-15, p. 1351-1357 7 p.

    Research output: Contribution to journal › Review › Research › peer-review

  67. Published

    Self-assembly, buckling and density-invariant growth of three-dimensional vascular networks

    Kirkegaard, Julius Bier, Nielsen, Bjarke Frost, Trusina, Ala & Sneppen, Kim, 31 Oct 2019, In: Journal of the Royal Society. Interface. 16, 159, 8 p., 20190517.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Self-consistent method for density estimation

    Bernacchia, A. & Pigolotti, S., 1 Jan 2011, In: Journal of The Royal Statistical Society Series B-statistical Methodology. 73, Part 3, p. 407-422

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Self-organization of structures and networks from merging and small-scale fluctuations

    Minnhagen, P., Rosvall, M., Sneppen, Kim & Trusina, Ala, 15 Sep 2004, In: Physica A: Statistical Mechanics and its Applications. 340, 4, p. 725-732

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Self-organized quantization and oscillations on continuous fixed-energy sandpiles

    Niehues, J., Jensen, Gorm Gruner & Härter, Jan Olaf Mirko, 31 Mar 2022, In: Physical Review E. 105, 3, 13 p., 034314.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Self-organizing systems and disease modelling: From Molecules to Populations

    Nielsen, Bjarke Frost, 2021, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 206 p.

    Research output: Book/Report › Ph.D. thesis › Research

  72. Published

    Self-similar distributions of fluid velocity and stress heterogeneity in a dissolving porous limestone

    Linga, G., Mathiesen, Joachim & Renard, F., Mar 2017, In: Journal of Geophysical Research: Biogeosciences. 122, 3, p. 1726-1743

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Self-sustained oscillations of active viscoelastic matter

    Plan, E. L. C. V. I. M., Le Thi, H., Yeomans, J. M. & Doostmohammadi, Amin, 8 Jul 2022, In: Journal of Physics A: Mathematical and Theoretical. 55, 27, 11 p., 275601.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Semiconductor Eco-materials for Water Treatment

    Gonzalez-Perez, Alfredo, Persson, K. M. & Samuelson, L., 2019, Handbook of Ecomaterials. Martínez, L. M. T., Kharissova, O. V. & Kharisov, B. I. (eds.). Springer, p. 413-439 Chapter 170

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  75. Published

    SensibleSleep: A Bayesian Model for Learning Sleep Patterns from Smartphone Events

    Cuttone, A., Baekgaard, P., Sekara, V., Jonsson, H., Larsen, J. E. & Lehmann, S., 11 Jan 2017, In: PLOS ONE. 12, 1, e0669901.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Separation and pattern formation in hydraulic jumps

    Bohr, T., Ellegaard, Clive Sigurd, Hansen, A., Hansen, K., Haaning, A., Putkaradze, V. & Watanabe, S., 1 Feb 1998, In: Physica A: Statistical Mechanics and its Applications. 249, 1-4, p. 111-117

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Severe population collapses and species extinctions in multihost epidemic dynamics

    Maslov, S. & Sneppen, Kim, 22 Aug 2017, In: Physical Review E. 96, 2, 022412.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Shear Thickening Oscillation in a Dilatant Fluid

    Nakanishi, H. & Mitarai, Namiko, 25 Feb 2011, In: Journal of the Physical Society of Japan. 80, 3, p. 033801

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Shear and Rapeseed Oil Addition Affect the Crystal Polymorphic Behavior of Milk Fat

    Kaufmann, N., Kirkensgaard, Jacob Judas Kain, Andersen, U. & Wiking, L., 1 Jun 2013, In: Journal of the American Oil Chemists' Society. 90, 6, p. 871-880

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Short-range correlation of stress chains near solid-to-liquid transition in active monolayers

    Khosh Sokhan Monfared, Siavash, Ravichandran, G., Andrade, J. E. & Doostmohammadi, Amin, 8 May 2024, In: Journal of the Royal Society Interface. 21, 214, 8 p., 20240022.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Short-range growth inhibitory signals from the epithelium can drive non-stereotypic branching in the pancreas

    Dahl-Jensen, Svend Bertel, Figueiredo-Larsen, E. M., Botton, A. & Sneppen, Kim, 23 Feb 2016, In: Physical Biology. 13, 1, 016007.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Signal integration in the galactose network of Escherichia coli

    Semsey, S., Krishna, S., Sneppen, Kim & Adhya, S., 2007, In: Molecular Microbiology. 65, 2, p. 465-476

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Signalling and Feedback in Biological Networks

    Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2008, Dynamics on and of Complex Networks: Applications to Biology, computer Sciences, and the Social Sciences ( Modeling and Simulation in Sciences, Engineering and Technolo). Ganguly, N., Deutsch, A. & Mukherjee, A. (eds.). Birkhäuser Verlag, p. Part 1 ( Biological Sciences)

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  84. Published

    Significant improvement of optical traps by tuning standard water immersion objectives

    Seyyed Reihani, S. N., Richardson, A. C. & Oddershede, L. B., 1 Oct 2011, In: Journal of Optics. 13, 10, p. 105301

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Simple Interaction Model for Particlly Wet Granular Materials

    Mitarai, Namiko & Nakanishi, H., 1 Feb 2010, In: A I P Conference Proceedings Series. 1227, p. 214-220

    Research output: Contribution to journal › Conference article › Research › peer-review

  86. Published

    Simple model for wet granular materials with liquid cluster

    Mitarai, Namiko & Nakanishi, H., 1 Dec 2009, In: EPL. 88, 6, p. 64001

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Simplified models of biological networks

    Sneppen, Kim, Krishna, S. & Semsey, S., 4 Jan 2010, In: Annual Review of Biophysics and Biomolecular Structure. 9, 39, p. 43-59 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Simulating Anomalous Dispersion and Multiphase Segregation in Porous Media with the Lattice Boltzmann Method

    Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.

    Research output: Contribution to conference › Conference abstract for conference › Research

  89. Published

    Simulating anomalous dispersion in porous media using the unstructured lattice Boltzmann method

    Misztal, M. K., Hernandez Garcia, A., Matin, R., Müter, D., Jha, D., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Frontiers in Physics. 3, 9 p., 50.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Simultaneous three-dimensional tracking of individual signals from multi-trap optical tweezers using fast and accurate photodiode detection

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 22 Sep 2014, In: Optics Express. 22, 19, p. 23661-23672

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Simultant: simultaneous curve fitting of functions and differential equations using analytical gradient calculations

    Kirkegaard, Julius Bier, 21 May 2022, In: BMC Bioinformatics. 23, 1, 9 p., 191.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Single Particle and PET-based Platform for Identifying Optimal Plasmonic Nano-Heaters for Photothermal Cancer Therapy

    Jørgensen, Jesper Tranekjær, Nørregaard, K., Tian, P., Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 2016, In: Scientific Reports. 6, 10 p., 30076.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Single-Molecule Study of Thermomyces lanuginosus Lipase in a Detergency Application System Reveals Diffusion Pattern Remodeling by Surfactants and Calcium

    Moses, M. E., Lund, P. M., Bohr, S. S., Iversen, J. F., Kæstel-Hansen, J., Kallenbach, A. S., Iversen, L., Christensen, S. M. & Hatzakis, Nikos, 2021, In: A C S Applied Materials and Interfaces. 13, 28, 9 p., 33704.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Single-cell Analysis of Lambda Immunity Regulation

    Bæk, K. T., Svenningsen, Sine Lo, Eisen, H., Sneppen, Kim & Brown, Stanley, 2003, In: Journal of Molecular Biology. 334, 3, p. 363-372 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Single-cell tracking reveals super-spreading brain cancer cells with high persistence

    Nousi, A., Sogaard, M. T., Audion, M. & Jauffred, Liselotte, 1 Dec 2021, In: Biochemistry and Biophysics Reports. 28, 12 p., 101120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Single-file dynamics with different diffusion constants

    Ambjornsson, T., Silbey, R. J., Lizana, G. L. & Lomholt, M. A., 2008, In: Journal of Chemical Physics. 129, 18, p. 185106

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Single-molecule observations of topotecan-mediated Top1B activity at a unique DNA sequence

    Koster, D. A., Czerwinski, F. & Halby, L., 2008, In: Nucleic Acids Research. 36, p. 2301-2310 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Small-scale nonequilibrium systems

    Oddershede, L. B. & Møller, P. C. F., 2011, Handbook of Nanophysics: Principles and methods. CPC Press ed. Taylor & Francis, Vol. chapter 7. p. 7-1- 7-16

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  99. Published

    Social contagion in a world with asymmetric influence

    Halvorsen, G. S., Pedersen, B. N. & Sneppen, Kim, 3 Feb 2021, In: Physical Review E. 103, 2, 5 p., 022303.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Social network differences of chronotypes identified from mobile phone data

    Aledavood, T., Lehmann, S. & Saramaki, J., 1 Dec 2018, In: EPJ Data Science. 7, 13 p., 46.

    Research output: Contribution to journal › Journal article › Research › peer-review

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