Biocomplexity

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  1. 2021
  2. Published

    Fiber finding algorithm using stepwise tracing to identify biopolymer fibers in noisy 3D images

    Rossen, Ninna Struck, Kyrsting, A., Giaccia, A. J., Erler, Janine & Oddershede, L. B., 2021, In: Biophysical Journal. 120, 18, p. 3860-3868 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Overdispersion in COVID-19 increases the effectiveness of limiting nonrepetitive contacts for transmission control

    Sneppen, Kim, Nielsen, Bjarke Frost, Taylor, R. J. & Simonsen, L., 6 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 14, 6 p., 2016623118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Activity-induced instabilities of brain organoids

    Thijssen, K., Kusters, G. L. A. & Doostmohammadi, Amin, 7 Dec 2021, In: The European Physical Journal E: Soft Matter and Biological Physics. 44, 12, 8 p., 147.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Unge forskere: Der er behov for en bedre model til at støtte coronaforsinket forskning

    Vallgårda, Karen Asta Arnfred, Andersen, P. E., Jauffred, Liselotte, Sørensen, Thomas Just, Møller, Niels Martin, Jønsson, Knud Andreas, Kristensen, Line Burholt, Bjørk, R., Dalsgaard, P., Dimke, H., Kropp, K., Laustsen, A. H., Nielsen, Mathias Wullum & Rasmussen, Laura Vang, 16 Mar 2021, In: Altinget.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  6. Published

    Unge forskere: Fondsmidler trækker forskningen skæv

    Vallgårda, Karen Asta Arnfred, Jauffred, Liselotte, Sørensen, Thomas Just, Rasmussen, B., Damgaard, R. B., Dalsgaard, P., Dimke, H., Jønsson, Knud Andreas, Kropp, K., Laustsen, A. H., Møller, Niels Martin & Ellersgaard, C. H., 23 Mar 2021, In: Altinget. 1 p.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  7. Published

    Unge forskere: Flere øremærkede forskningsmidler truer fri forskning

    Vallgårda, Karen Asta Arnfred, Andersen, P. E., Bjørk, R., Dalsgaard, P., Damgaard, R. B., Dimke, H., Hansen, N. C., Jauffred, Liselotte, Jønsson, Knud Andreas, Kropp, K., Laustsen, A. H., Møller, Niels Martin, Nielsen, Mathias Wullum, Sørensen, Thomas Just & Nielsen, T. K., 11 Feb 2021, In: Altinget. 1 p.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  8. Published

    Mechanics of cell integration in vivo

    Ventura, Guilherme Bastos, Amiri, A., Thiagarajan, Raghavan, Tolonen, Mari, Doostmohammadi, Amin & Sedzinski, Jakub, 18 Nov 2021, In: bioRxiv. 33 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Non-linear Conductance, Rectification, and Mechanosensitive Channel Formation of Lipid Membranes

    Zecchi, K. A. & Heimburg, Thomas Rainer, 26 Jan 2021, In: Frontiers in Cell and Developmental Biology. 8, 18 p., 592520.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Sall4 and Myocd Empower Direct Cardiac Reprogramming From Adult Cardiac Fibroblasts After Injury

    Zhao, H., Zhang, Y., sgk681, sgk681, Sun, Q., Yang, C., Wang, H., Yang, J., Yang, Y., Yang, X., Liu, Y. & Zhao, Y., 26 Feb 2021, In: Frontiers in Cell and Developmental Biology. 9, 13 p., 608367.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    The COVID-19 pandemic: key considerations for the epidemic and its control

    Ørskov, S., Nielsen, Bjarke Frost, Føns, S., Sneppen, Kim & Simonsen, L., Jul 2021, In: APMIS. 129, 7, p. 408-420 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. 2020
  13. Published

    Tanker i lockdown

    Andersen, C. (ed.), Jauffred, Liselotte (ed.), Laustsen, A. H. (ed.), Levisen, C. (ed.), Lomborg, Stine (ed.) & Pristed, B. B. (ed.), 2020, Det Kongelige Danske Videnskabernes Selskab. 180 p.

    Research output: Book/Report › Anthology › Communication

  14. Published

    Newton-Cartan submanifolds and fluid membranes

    Armas, J., Hartong, J., Have, E., Nielsen, Bjarke Frost & Obers, Niels A. , 18 Jun 2020, In: Physical Review E. 101, 6, 25 p., 062803.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Interdisciplinary Synergy to Reveal Mechanisms of Annexin-Mediated Plasma Membrane Shaping and Repair

    Bendix, Poul Martin, Simonsen, A. C., Florentsen, C. D., Häger, S. C., Mularski, A., Zanjani, A. A. H., Moreno Pescador, Guillermo Sergio, Klenow, M. B., Sønder, S. L., Danielsen, Helena Maria Dávidsdóttir, Arastoo, M. R., Heitmann, A. S., Pandey, M. P., Lund, F. W., Dias, C., Khandelia, H. & Nylandsted, J., 21 Apr 2020, In: Cells. 9, 4, 13 p., 1029.

    Research output: Contribution to journal › Review › Research › peer-review

  16. Published

    Unge forskere: Forskningsforliget udhuler midlerne til fri forskning

    Bjørk, R., Dalsgaard, P., Dimke, H., Hansen, N. C., Jauffred, Liselotte, Kropp, K., Laustsen, A. H., Sørensen, Thomas Just & Vallgårda, Karen Asta Arnfred, 17 Nov 2020, København : Altinget.dk.

    Research output: Other contribution › Research

  17. Published

    Unge forskere: Genåbn universiteterne nu

    Bjørk, R., Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Møller, Niels Martin, Pedersen, B. P. & Sørensen, Thomas Just, 20 May 2020

    Research output: Other contribution › Communication

  18. Published

    Unge forskere: Høj risikovillighed i forskningsfinansieringen er nødvendigt

    Bjørk, R., Dalsgaard, P., Dimke, H., Engberg-Pedersen, Anders, Jauffred, Liselotte, Kropp, K., Niss, K., Pedersen, B. P. & Sørensen, Thomas Just, 16 Jan 2020, København : Altinget.dk.

    Research output: Other contribution › Communication

  19. Published

    Unge forskere til politikere: Drop BNP som målestok for forskningsmidler

    Bjørk, R., Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Niss, K., Kropp, K., Pedersen, B. P., Sørensen, Thomas Just & Vallgårda, Karen Asta Arnfred, 26 May 2020, København : Altinget.dk.

    Research output: Other contribution › Communication

  20. Published

    Engagement and disengagement components of attentional bias to emotional stimuli in anxiety and depression

    Blicher, A., Reinholdt-Dunne, M. L., Hvenegaard, M., Winding, C., Petersen, Anders & Vangkilde, Signe, 2020, In: Journal of Experimental Psychopathology. 11, 3, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Quantification of Visco-Elastic Properties of a Matrigel for Organoid Development as a Function of Polymer Concentration

    Borries, M., Farhangibarooji, Younes, Yennek, S., Grapin-Botton, A., Berg-Sorensen, K. & Oddershede, L. B., 30 Oct 2020, In: Frontiers in Physics. 8, 9 p., 579168.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Contact Layer as a Propelling Advantage in Throwing

    Celestini, F., Mathiesen, Joachim, Argentina, M. & Raufaste, C., 16 Oct 2020, In: Physical Review Applied. 14, 4, 8 p., 044026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Flow States and Transitions of an Active Nematic in a Three-Dimensional Channel

    Chandragiri, S., Doostmohammadi, Amin, Yeomans, J. M. & Thampi, S. P., 30 Sep 2020, In: Physical Review Letters. 125, 14, 6 p., 148002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    A possible universal role for mRNA secondary structure in bacterial translation revealed using a synthetic operon

    Chemla, Y., Peeri, M., Heltberg, Mathias Spliid, Eichler, J., Jensen, Mogens Høgh, Tuller, T. & Alfonta, L., 24 Sep 2020, In: Nature Communications. 11, 1, 11 p., 4827.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Cost-benefit of limited isolation and testing in COVID-19 mitigation

    Eilersen, Andreas Thomas & Sneppen, Kim, 29 Oct 2020, In: Scientific Reports. 10, 1, 7 p., 18543.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Chaos in disease outbreaks among prey

    Eilersen, Andreas Thomas, Jensen, Mogens Høgh & Sneppen, Kim, 3 Mar 2020, In: Scientific Reports. 10, 7 p., 3907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The uneasy coexistence of predators and pathogens

    Eilersen, Andreas Thomas & Sneppen, Kim, 2 Jul 2020, In: The European Physical Journal E: Soft Matter and Biological Physics. 43, 7, 7 p., 42.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Interaction of wave-driven particles with slit structures

    Ellegaard, Clive Sigurd & Levinsen, Mogens, 26 Aug 2020, In: Physical Review E. 102, 21 p., 023115.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Defence versus growth in a hostile world: lessons from phage and bacteria

    Eriksen, R. S. & Krishna, S., 16 Sep 2020, In: Royal Society Open Science. 7, 9, 13 p., 201118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    On Phage Adsorption to Bacterial Chains

    Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 3 Nov 2020, In: Biophysical Journal. 119, 9, p. 1896-1904 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Spatial determinants of viral infections

    Eriksen, R. S., 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 205 p.

    Research output: Book/Report › Ph.D. thesis › Research

  32. Published

    Sustainability of spatially distributed bacteria-phage systems

    Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 2020, In: Scientific Reports. 10, 1, p. 1-12 3154.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Annexins in Plasma Membrane Repair

    Florentsen, C. D., 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 218 p.

    Research output: Book/Report › Ph.D. thesis › Research

  34. Published

    Plasmonic Material Engineering for Targeted Therapeutics

    Florentsen, C. D., Moreno Pescador, Guillermo Sergio, Kjær, Andreas, Oddershede, L. B. & Bendix, Poul Martin, 6 Jul 2020, In: Advanced Optical Materials. 17 p., 2000616.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Cold Pools as Conveyor Belts of Moisture

    Fuglestvedt, H. F. & Härter, Jan Olaf Mirko, 28 Jun 2020, In: Geophysical Research Letters. 47, 12, 11 p., e2020GL087319.

    Research output: Contribution to journal › Letter › Research › peer-review

  36. Published

    The 2020 motile active matter roadmap

    Gompper, G., Winkler, R. G., Speck, T., Solon, A., Nardini, C., Peruani, F., Loewen, H., Golestanian, R., Kaupp, U. B., Alvarez, L., Kiorboe, T., Lauga, E., Poon, W. C. K., DeSimone, A., Muinos-Landin, S., Fischer, A., Soeker, N. A., Cichos, F., Kapral, R., Gaspard, P. & 17 others, Ripoll, M., Sagues, F., Doostmohammadi, Amin, Yeomans, J. M., Aranson, I. S., Bechinger, C., Stark, H., Hemelrijk, C. K., Nedelec, F. J., Sarkar, T., Aryaksama, T., Lacroix, M., Duclos, G., Yashunsky, V., Silberzan, P., Arroyo, M. & Kale, S., 8 May 2020, In: Journal of Physics: Condensed Matter. 32, 19, 68 p., 193001.

    Research output: Contribution to journal › Review › Research › peer-review

  37. Published

    Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing

    Gummesson, Bertil, Shah, S. A., Borum, A. S., Fessler, M., Mitarai, Namiko, Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2020, In: Frontiers in Genetics. 11, 17 p., 144.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Particle-Based Tracking of Cold Pool Gust Fronts

    Henneberg, O., Meyer, B. & Härter, Jan Olaf Mirko, 1 May 2020, In: Journal of Advances in Modeling Earth Systems. 12, 5, 20 p., e2019MS001910.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Dynamics of bacterial populations under the feast-famine cycles

    Himeoka, Y. & Mitarai, Namiko, 27 Mar 2020, In: Physical Review Research. 2, 1, 15 p., 013372.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Epigenetic Ratchet: Spontaneous Adaptation via Stochastic Gene Expression

    Himeoka, Y. & Kaneko, K., 16 Jan 2020, In: Scientific Reports. 10, 1, 7 p., 459.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Diurnal self-aggregation

    Härter, Jan Olaf Mirko, Meyer, B. & Nissen, Silas Boye, 30 Jul 2020, In: n p j Climate and Atmospheric Science. 3, 11 p., 30.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Comment on "On biological signaling" by G. Nimtz and H. Aichmann, Z. Naturforsch. 75a: 507-509, 2020

    Jackson, Andrew D. & Heimburg, Thomas Rainer, Nov 2020, In: Zeitschrift für Naturforschung. A, A Journal of Physical Sciences. 75, 11, p. 933-935 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Det Unge Akademi: Ny stillingsstruktur på universiteterne har flere faldgruber

    Jauffred, Liselotte, 13 Jan 2020, København : Altinget.dk.

    Research output: Other contribution › Communication

  44. Published

    Descendant distributions for the impact of mutant contagion on networks

    Juul, J. S. & Strogatz, S. H., 1 Jul 2020, In: Physical Review Research. 2, 3, 6 p., 033005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Kronik: Risikobaseret genåbning af Danmark kan give færre alvorligt syge og en hurtigere genåbning

    Kirkeby, Carsten, Græsbøll, K., Halasa, T., Sneppen, Kim & Christiansen, L. E., 2020, In: Ingenøren.dk.

    Research output: Contribution to journal › Journal article › Communication

  46. Published

    Airborne Pathogens in a Heterogeneous World: Superspreading & Mitigation

    Kirkegaard, Julius Bier, Mathiesen, Joachim & Sneppen, Kim, 27 Oct 2020, In: medRxiv : the preprint server for health sciences. 9 p.

    Research output: Contribution to journal › Journal article › Research

  47. Published

    Optimal Transport Flows for Distributed Production Networks

    Kirkegaard, Julius Bier & Sneppen, Kim, 22 May 2020, In: Physical Review Letters. 124, 20, 5 p., 208101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    How Membrane Geometry Regulates Protein Sorting Independently of Mean Curvature

    Larsen, J. B., Rosholm, K. R., Kennard, C., Pedersen, S. L., Munch, H. K., Tkach, Vadym, Sakon, J. J., Bjornholm, T., Weninger, K. R., Bendix, Poul Martin, Jensen, Knud Jørgen, Hatzakis, Nikos, Uline, M. J. & Stamou, Dimitrios, 2020, In: ACS Central Science. 6, 7, p. 1159-1168 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Transient electrohydrodynamic flow with concentration-dependent fluid properties: Modelling and energy-stable numerical schemes

    Linga, G., Bolet, A. & Mathiesen, Joachim, 1 Jul 2020, In: Journal of Computational Physics. 412, 34 p., 109430.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Deformation Precursors to Catastrophic Failure in Rocks

    McBeck, J. A., Aiken, J. M., Mathiesen, Joachim, Ben-Zion, Y. & Renard, F., 28 Dec 2020, In: Geophysical Research Letters. 47, 24, 9 p., e2020GL090255.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Bacteria solve the problem of crowding by moving slowly

    Meacock, O. J., Doostmohammadi, Amin, Foster, K. R., Yeomans, J. M. & Durham, W. M., 23 Nov 2020, In: Nature Physics. 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Mechanical Forcing of Convection by Cold Pools: Collisions and Energy Scaling

    Meyer, B. & Härter, Jan Olaf Mirko, 26 Oct 2020, In: Journal of Advances in Modeling Earth Systems. 12, 11, 20 p., e2020MS002281.

    Research output: Contribution to journal › Journal article › Research › peer-review

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