Biocomplexity

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  1. 2018
  2. Published

    Stochastic activation in a genetic switch model

    Hertz, John, Tyrcha, J. & Correales, A., 6 Nov 2018, In: Physical Review E. 98, 5, 17 p., 052403.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Why not use thermal radiation for nanothermometry?

    Jauffred, Liselotte, 1 Nov 2018, In: Applied Optics. 57, 31, p. 9508-9511

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Entrainment as a means of controlling phase waves in populations of coupled oscillators

    Juul, J. S., Krishna, S. & Jensen, Mogens Høgh, 21 Dec 2018, In: Physical Review E. 98, 6, 9 p., 062412.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Isospectral discrete and quantum graphs with the same flip counts and nodal counts

    Juul, J. S. & Joyner, C. H., 15 Jun 2018, In: Journal of Physics A: Mathematical and Theoretical. 51, 24, 15 p., 245101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Synergistic effects in threshold models on networks

    Juul, J. S. & Porter, M. A., 1 Jan 2018, In: Chaos. 28, 1, 12 p., 013115.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Non-invasive Early Response Monitoring of Nanoparticle-assisted Photothermal Cancer Therapy Using 18F-FDG, 18F-FLT, and 18F-FET PET/CT Imaging

    Jørgensen, Jesper Tranekjær, Nørregaard, K., Simon Martin, M., Oddershede, L. B. & Kjær, Andreas, 27 Apr 2018, In: Nanotheranostics. 2, 3, p. 201-210

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Academic performance and behavioral patterns

    Kassarnig, V., Mones, E., Bjerre-Nielsen, Andreas, Sapiezynski, P., Lassen, David Dreyer & Lehmann, S., 24 Apr 2018, In: EPJ Data Science. 7, 16 p., 10.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Controlling wetting with electrolytic solutions: Phase-field simulations of a droplet-conductor system

    Linga, G., Bolet, A. & Mathiesen, Joachim, 5 Jul 2018, In: Physical Review E. 98, 1, 11 p., 013101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Fluid Flows with Complex Interfaces: Modelling and Simulation from Pore to Pipe

    Linga, G., 2018, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  11. Published

    Exploring the Link between Nucleosome Occupancy and DNA Methylation

    Lövkvist, Cecilia, Sneppen, Kim & Härter, Jan Olaf Mirko, 12 Jan 2018, In: Frontiers in Genetics. 8, 7 p., 232.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Coherent structures in turbulent square duct flow

    Matin, R., Hellström, L. H. O., Hernandez, A., Mathiesen, Joachim & Smits, A. J., 2018, In: International Journal of Heat and Fluid Flow. 74, p. 144-153

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Finite-element lattice Boltzmann simulations of contact line dynamics

    Matin, R., Krzysztof Misztal, M., Hernández-garcía, A. & Mathiesen, Joachim, 19 Jan 2018, In: Physical Review E. 97, 1, 013307.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Optimizing targeted vaccination across cyber-physical networks: an empirically based mathematical simulation study

    Mones, E., Stopczynski, A., Pentland, A. '., Hupert, N. & Lehmann, S., 1 Jan 2018, In: Journal of the Royal Society. Interface. 15, 138, 9 p., 20170783.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Lateral Distribution and Mobility of Transmembrane Proteins in Plasma Membrane Vesicles

    Moreno Pescador, Guillermo Sergio, Otsbye, H., Semsey, S., Veje, E. L., Daniels, R. & Bendix, Poul Martin, 18 Feb 2018, In: Biophysical Journal. 114, 3, Supp. 2976-pos, p. 600A-600A 1 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  16. Published

    Phone-based metric as a predictor for basic personality traits

    Mønsted, B., Mollgaard, A. & Mathiesen, Joachim, 1 Jun 2018, In: Journal of Research in Personality. 74, p. 16-22

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Theoretical tool bridging cell polarities with development of robust morphologies

    Nissen, Silas Boye, Rønhild, S., Trusina, Ala & Sneppen, Kim, 27 Nov 2018, In: eLife. 7, 25 p., e38407.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Design process robustness: A bipartite network analysis reveals the central importance of people

    Piccolo, S. A., Jørgensen, Sune Lehmann & Maier, A., 2018, In: Design Science. 4

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Critical Evolution of Damage Toward System-Size Failure in Crystalline Rock

    Renard, F., Weiss, J., Mathiesen, Joachim, Ben-zion, Y., Kandula, N. & Cordonnier, B., 1 Feb 2018, In: Journal of Geophysical Reseach. 123, 2, p. 1969-1986

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Optical trapping of individual magnetic nanoparticles

    Samadi, A., Wang, M., Yang, Y. & Oddershede, L. B., 19 Aug 2018, Optical Trapping and Optical Micromanipulation XV. SPIE - International Society for Optical Engineering, Vol. 10723. 107230E. (Proceedings of SPIE).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Platinum nanoparticles: a non-toxic, effective and thermally stable alternative plasmonic material for cancer therapy and bioengineering

    Samadi, A., Klingberg, H., Jauffred, Liselotte, Kjær, Andreas, Bendix, Poul Martin & Oddershede, L. B., 21 May 2018, In: Nanoscale. 10, 19, p. 9097-9107 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The chaperone effect in scientific publishing

    Sekara, V., Deville, P., Ahnert, S. E., Barabasi, A., Sinatra, R. & Lehmann, S., 11 Dec 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 50, p. 12603-12607

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Globalization in a nutshell

    Sneppen, Kim & Bornholdt, S., 29 Oct 2018, In: Physical Review E. 98, 4, 6 p., 022314.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Cooke–Triplet tweezers: more compact, robust, and efficient optical tweezers

    Stangner, T., Dahlberg, T., Svenmarker, P., Zakrisson, J., Wiklund, K., Oddershede, L. B. & Andersson, M., 26 Mar 2018, In: Optics Letters. 43, 9, p. 1990-1993

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    How Physical Proximity Shapes Complex Social Networks

    Stopczynski, A., Pentland, A. '. & Lehmann, S., 7 Dec 2018, In: Scientific Reports. 8, 17722.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Is a constant low-entropy process at the root of glycolytic oscillations?

    Thoke, H. S., Olsen, L. F., Duelund, L., Stock, R. P., Heimburg, Thomas Rainer & Bagatolli, L. A., Sep 2018, In: Journal of Biological Physics. 44, 3, p. 419-431

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Dynamic Modeling of Indole Glucosinolate Hydrolysis and Its Impact on Auxin Signaling

    Vik, D., Mitarai, Namiko, Wulff, N., Halkier, Barbara Ann & Burow, Meike, 2018, In: Frontiers in Plant Science. 9, 16 p., 550.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The free energy of biomembrane and nerve excitation and the role of anesthetics

    Wang, T., Muzic, T., Jackson, Andrew D. & Heimburg, Thomas Rainer, 16 Oct 2018, In: Biochimica et Biophysica Acta - Biomembranes. 1860, 10, p. 2145-2153 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Investigation of cancer cell dynamics during division and migration

    West, A. V., 2018, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    Cancer cells' ability to mechanically adjust to extracellular matrix stiffness correlates with their invasive potential

    Wullkopf, L., West, A. K. V., Leijnse, Natascha, Cox, T. R., Madsen, C. D., Oddershede, L. B. & Erler, Janine, 2018, In: Molecular Biology of the Cell. 29, 20, p. 2378-2385 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. 2017
  32. Published

    Multi-scale spatio-temporal analysis of human mobility

    Alessandretti, L., Sapiezynski, P., Lehmann, S. & Baronchelli, A., 15 Feb 2017, In: PLOS ONE. 12, 2, e0171686.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Defective STIM-mediated store operated Ca2+ entry in hepatocytes leads to metabolic dysfunction in obesity

    Arruda, A. P., Pers, B. M., Parlakgul, G., Guney, E., Goh, T., Cagampan, E., Lee, G. Y., Goncalves, R. L. & Hotamisligil, G. S., 15 Dec 2017, In: eLife. 6, e29968.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Hot-nanoparticle-mediated fusion of selected cells

    Bahadori, Azra, Oddershede, L. B. & Bendix, Poul Martin, 31 May 2017, In: Nano Research. 10, 6, p. 2034-2045

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Optically controlled and selective fusion of cells and vesicles using plasmonic nano-heaters

    Bahadori, Azra, Oddershede, L. B. & Bendix, Poul Martin, 19 May 2017, Light Robotics - Structure-mediated Nanobiophotonics. Glückstad, J. & Palima, D. (eds.). Elsevier, 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  36. Published

    Remotely controlled fusion of selected vesicles and living cells

    Bahadori, Azra, Rørvig-Lund, A., Semsey, S., Oddershede, L. B. & Bendix, Poul Martin, 15 Dec 2017, In: Proceedings of SPIE. 9922, p. 992211-1

    Research output: Contribution to journal › Conference article › Research › peer-review

  37. Published

    Expanding the genetic code of a phototrophic organism

    Chemla, Y., Friedman, M., Heltberg, Mathias Spliid, Bakhrat, A., Nagar, E., Schwarz, R., Jensen, Mogens Høgh & Alfonta, L., 10 Sep 2017, In: Biochemistry. 56, 16, p. 2161-2165

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Stress-driven pattern formation in living and non-living matter

    Christensen, A., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  39. Published

    SensibleSleep: A Bayesian Model for Learning Sleep Patterns from Smartphone Events

    Cuttone, A., Baekgaard, P., Sekara, V., Jonsson, H., Larsen, J. E. & Lehmann, S., 11 Jan 2017, In: PLOS ONE. 12, 1, e0669901.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The physics of organoids: a biophysical approach to understanding organogenesis

    Dahl-Jensen, Svend Bertel & Grapin-Botton, A., 15 Mar 2017, In: Development (Cambridge, England). 144, 6, p. 946-951 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Occlusion of the ribosome binding site connects the translational initiation frequency, mRNA stability and premature transcription termination

    Eriksen, M., Sneppen, Kim, Pedersen, Steen & Mitarai, Namiko, 14 Mar 2017, In: Frontiers in Microbiology. 8, 7 p., 362.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Deterministic extinction by mixing in cyclically competing species

    Feldager, C. W., Mitarai, Namiko & Ohta, H., 20 Mar 2017, In: Physical Review E. 95, 3, 032318.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The memory remains: Understanding collective memory in the digital age

    Garcia-Gavilanes, R., Mollgaard, A., Tsvetkova, M. & Yasseri, T., 5 Apr 2017, In: Science Advances. 3, 4, e1602368.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Whole-GUV patch-clamping

    Garten, M., Mosgaard, L. D., Bornschloegl, T., Dieudonne, S., Bassereau, P. & Toombes, G. E. S., 10 Jan 2017, In: Proceedings of the National Academy of Sciences USA (PNAS). 114, 2, p. 328-333

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Near-infrared remotely triggered drug-release strategies for cancer treatment

    Goodman, A. M., Neumann, O., Norregaard, K., Henderson, L., Choi, M., Clare, S. E. & Halas, N. J., 21 Nov 2017, In: Proceedings of the National Academy of Sciences USA (PNAS). 114, 47, p. 12419-12424

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    A numerical strategy for finite element modeling of frictionless asymmetric vocal fold collision

    Granados, A., Misztal, M. K., Brunskog, J., Visseq, V. & Erleben, Kenny, 2017, In: International Journal for Numerical Methods in Biomedical Engineering. 33, 2, 25 p., e02793.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Existence and construction of large stable food webs

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements

    Hao, N., Sneppen, Kim, Shearwin, K. E. & Dodd, I. B., 19 May 2017, In: Nucleic Acids Research. 45, 9, p. 5074-5085

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Linear nonequilibrium thermodynamics of reversible periodic processes and chemical oscillations

    Heimburg, Thomas Rainer, 14 Jul 2017, In: Physical Chemistry Chemical Physics. 19, 26, p. 17331-17341

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Time Correlations in Mode Hopping of Coupled Oscillators

    Heltberg, Mathias Spliid, Krishna, S. & Jensen, Mogens Høgh, 2 May 2017, In: Journal of Statistical Physics. 167, 3-4, p. 792-805

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Path integral methods for the dynamics of stochastic and disordered systems

    Hertz, John, Roudi, Y. & Sollich, P., 20 Jan 2017, In: Journal of Physics A: Mathematical and Theoretical. 50, 3, 46 p., 033001.

    Research output: Contribution to journal › Review › Research › peer-review

  52. Published

    Impact of Zygosity on Bimodal Phenotype Distributions

    Holst-Hansen, T., Abad, E., Muntasell, A., López-Botet, M., Jensen, Mogens Høgh, Trusina, Ala & Garcia-Ojalvo, J., 11 Jul 2017, In: Biophysical Journal. 113, 1, p. 148-156 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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