- Published
The COVID-19 pandemic: key considerations for the epidemic and its control
Ørskov, S., Nielsen, Bjarke Frost, Føns, S., Sneppen, Kim & Simonsen, L., Jul 2021, In: APMIS. 129, 7, p. 408-420 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High Pressure Studies up to 50 GPa of CuO
Åsbrink, S., Gerward, L., Olsen, J. S. & Steenstrup, S., 1992, In: High Pressure Research. 10, p. 515-521Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Formation of martian araneiforms by gas-driven erosion of granular material
de Villiers, S., Nermoen, A., Jamtveit, B., Mathiesen, Joachim, Meakin, P. & Werner, S. C., 2 Jul 2012, In: Geophysical Research Letters. 39, p. L13204 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Influence of volumetric modulated arc therapy and FET-PET scanning on treatment outcomes for glioblastoma patients
af Rosenschold, P. M., Law, Ian, Engelholm, S. A., Muhic, A., Lundemann, M. J., Roed, H., Grunnet, K. & Poulsen, H. S., Jan 2019, In: Radiotherapy and Oncology. 130, p. 149-155Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sall4 and Myocd Empower Direct Cardiac Reprogramming From Adult Cardiac Fibroblasts After Injury
Zhao, H., Zhang, Y., sgk681, sgk681, Sun, Q., Yang, C., Wang, H., Yang, J., Yang, Y., Yang, X., Liu, Y. & Zhao, Y., 26 Feb 2021, In: Frontiers in Cell and Developmental Biology. 9, 13 p., 608367.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interferometric detection of single gold nanoparticles calibrated against TEM size distributions
Zhang, L., Christensen, S., Bendix, Poul Martin, Bhatia, V. K., Loft, Steffen & Stamou, Dimitrios, 2015, In: Small. 11, 29, p. 3550-3555 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active inter-cellular forces in collective cell motility
Zhang, G., Mueller, R., Doostmohammadi, Amin & Yeomans, J. M., 26 Aug 2020, In: Journal of the Royal Society. Interface. 17, 169, 9 p., 20200312.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maximum Likelihood Reconstruction for Ising Models with Asynchronous Updates
Zeng, H., Alava, M., Aurell, E., Hertz, John & Roudi, Y., 20 May 2013, In: Physical Review Letters. 110, 21, 210601.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
L-1 regularization for reconstruction of a non-equilibrium Ising model
Zeng, H. L., Hertz, John & Roudi, Y., 2 Oct 2014, In: Physica Scripta. Topical Issues. 89, 10, 105002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On polarization in biomembranes
Zecchi, K. A., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Non-linear Conductance, Rectification, and Mechanosensitive Channel Formation of Lipid Membranes
Zecchi, K. A. & Heimburg, Thomas Rainer, 26 Jan 2021, In: Frontiers in Cell and Developmental Biology. 8, 18 p., 592520.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechano-capacitive properties of polarized membranes and the application to conductance measurements of lipid membrane patches
Zecchi, K. A., Mosgaard, L. D. & Heimburg, Thomas Rainer, 1 Jan 2017, In: Journal of Physics: Conference Series. 780, 012001.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
RBS analysis of diffusion and evaporation of implanted lead in aluminium
Yu, L. D., Steenstrup, S., Johansen, A., Johnson, Erik, Sarholt-Kristensen, L. & Bourdelle, K. K., 1992, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. B64, p. 78-82Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analyzing inflammatory response as excitable media
Yde, Pernille, Jensen, Mogens Høgh & Trusina, Ala, 18 Nov 2011, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 84, 5, Part 1, p. 051913Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial Structures and Regulation in Biological Systems
Yde, Pernille, 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 167 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Modeling the NF-kappa B mediated inflammatory response predicts cytokine waves in tissue
Yde, Pernille, Mengel, A. B., Jensen, Mogens Høgh, Krishna, S. & Trusina, Ala, 19 Jul 2011, In: BMC Systems Biology. 5, p. 115Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemicals orchestrate reprogramming with hierarchical activation of master transcription factors primed by endogenous Sox17 activation
Yang, Z., Xu, X., Gu, C., Li, J., Wu, Q., Ye, C., Nielsen, Alexander Valentin, Mao, L., Ye, J., Bai, K., Guo, F., Tang, C. & Zhao, Y., 30 Oct 2020, In: Communications Biology . 3, 1, 10 p., 629.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemical Pretreatment Activated a Plastic State Amenable to Direct Lineage Reprogramming
Yang, Z., Xioachan, X., Gu, C., Nielsen, Alexander Valentin, Chen, G., Guo, F., Tang, C. & Zhao, Y., 25 Mar 2022, In: Frontiers in Cell and Developmental Biology. 10, 16 p., 865038.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Universal Transitions between Growth and Dormancy via Intermediate Complex Formation
Yamagishi, J. F. & Kaneko, Kunihiko, 12 Mar 2024, In: Physical Review Letters. 132, 11, 7 p., 118401.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Jag1-Notch cis-interaction determines cell fate segregation in pancreatic development
sgk681, sgk681, Seymour, Philip Allan, Sneppen, Kim, Trusina, Ala, Egeskov-Madsen, A. L. R., Jørgensen, Mette Christine, Jensen, Mogens Høgh & Serup, Palle, 2023, In: Nature Communications. 14, 17 p., 348.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phase-state dependent current fluctuation in pure lipid membranes
Wunderlich, B., Leirer, C. & Heimburg, Thomas Rainer, 2009, In: Biophysical Journal. 96, 11, p. 4592-4597 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cancer cells' ability to mechanically adjust to extracellular matrix stiffness correlates with their invasive potential
Wullkopf, L., West, A. K. V., Leijnse, Natascha, Cox, T. R., Madsen, C. D., Oddershede, L. B. & Erler, Janine, 2018, In: Molecular Biology of the Cell. 29, 20, p. 2378-2385 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The thermodynamics of lipid ion channel formation in the absence and presence of anesthetics. BLM experiments and simulations
Wodzinska, K., Blicher, A. & Heimburg, Thomas Rainer, 2009, In: Soft Matter. 5, 17, p. 3319-3330 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interweaving categories: Styles, paradigms, and models
Winther, Rasmus, 1 Dec 2012, In: Studies in History and Philosophy of Science - Part A. 43, 4, p. 628-639Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Observation of Motion-Dependent Nonlinear Dispersion with Narrow-Linewidth Atoms in an Optical Cavity
Westergaard, P. G., Christensen, B. T. R., Tieri, D., Matin, R., Cooper, J., Holland, M., Ye, J. & Thomsen, Jan Westenkær, 4 Mar 2015, In: Physical Review Letters. 114, 9, 093002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of cancer cell dynamics during division and migration
West, A. V., 2018, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Division Induced Dynamics in Non-Invasive and Invasive Breast Cancer
West, A. V., Wullkopf, L., Christensen, A., Leijnse, Natascha, Tarp, J. M., Mathiesen, Joachim, Erler, Janine & Oddershede, L. B., 3 Feb 2017, In: Biophysical Journal. 112, 3, Supp. 1, p. 123A-123AResearch output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics of cancerous tissue correlates with invasiveness
West, A. V., Wullkopf, L., Christensen, A., Leijnse, Natascha, Tarp, J. M., Mathiesen, Joachim, Erler, Janine & Oddershede, L. B., 6 Mar 2017, In: Scientific Reports. 7, 43800.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics of uptake and metabolism of small molecules in cellular response systems
Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: PLoS ONE. 4, 3, p. e4923Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reply to "Comment on 'Penetration of Action Potentials During Collision in the Median and Lateral Giant Axons of Invertebrates'"
Wang, T., Gonzalez-Perez, Alfredo, Budvytyte, R., Jackson, Andrew D. & Heimburg, Thomas Rainer, 24 Apr 2017, In: Physical Review X. 7, 2, 028002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The free energy of biomembrane and nerve excitation and the role of anesthetics
Wang, T., Muzic, T., Jackson, Andrew D. & Heimburg, Thomas Rainer, 16 Oct 2018, In: Biochimica et Biophysica Acta - Biomembranes. 1860, 10, p. 2145-2153 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Studies on the Action Potential From a Thermodynamic Perspective
Wang, T., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Role of Passive Cloud Volumes in the Transition From Shallow to Deep Atmospheric Convection
Vraciu, C. V., Kruse, Irene Livia & Härter, Jan Olaf Mirko, 16 Dec 2023, In: Geophysical Research Letters. 50, 23, 9 p., e2023GL105996.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Roadmap for optical tweezers
Volpe, G., Maragò, O. M., Rubinsztein-Dunlop, H., Pesce, G., Stilgoe, A. B., Volpe, G., Tkachenko, G., Truong, V. G., Chormaic, S. N., Kalantarifard, F., Elahi, P., Käll, M., Callegari, A., Marqués, M. I., Neves, A. A. R., Moreira, W. L., Fontes, A., Cesar, C. L., Saija, R., Saidi, A. & 63 others, , Apr 2023, In: Journal of Physics-Photonics. 5, 2, 136 p., 022501.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variations in interpulse interval of double action potentials during propagation in single neurons
Villagran-Vargas, E., Rodriguez-Sosa, L., Hustert, R., Blicher, A., Laub, K. R. & Heimburg, Thomas Rainer, 2013, In: Synapse. 67, 2, p. 68-78 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic Modeling of Indole Glucosinolate Hydrolysis and Its Impact on Auxin Signaling
Vik, D., Mitarai, Namiko, Wulff, N., Halkier, Barbara Ann & Burow, Meike, 2018, In: Frontiers in Plant Science. 9, 16 p., 550.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Multiciliated cells use filopodia to probe tissue mechanics during epithelial integration in vivo
Ventura, G., Amiri, A., Thiagarajan, Raghavan, Tolonen, Mari, Doostmohammadi, Amin & Sedzinski, Jakub, 2022, In: Nature Communications. 13, 1, 15 p., 6423.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinct impacts of polar and nematic self-propulsion on active unjamming
Venkatesh, V., Mondal, C. & Doostmohammadi, Amin, 2022, In: Journal of Chemical Physics. 157, 16, 11 p., 164901.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Time-dependent Taylor-Aris dispersion of an initial point concentration
Vedel, S., Hovad, E. & Bruus, H., 2014, In: Journal of Fluid Mechanics. 752, p. 107-122 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asymmetric Damage Segregation Constitutes an Emergent Population-Level Stress Response
Vedel, S., Nunns, H., Košmrlj, A., Semsey, S. & Trusina, Ala, 13 Jul 2016, In: Cell Systems. 3, 2, p. 187-198Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Periodic solutions and refractory periods in the soliton theory for nerves and the locust femoral nerve
Vargas, V., Ludu, A., Hustert, R., Gumrich, P., Jackson, Andrew D. & Heimburg, Thomas Rainer, 1 Jan 2011, In: Biophysical Chemistry. 153, 2-3, p. 159-167 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Instabilities in Sand Ripples
Van Hecke, M., Ellegaard, Clive Sigurd & Bohr, T., 2001, In: Nature. 410, p. 324Research output: Contribution to journal › Comment/debate › Research
- Published
Bekymrede forskere: Politisk styring af offentlige forskningsmidler må ikke underminere grundforskningen
Vallgårda, Karen Asta Arnfred, Bjørk, R., Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Kropp, K., Laustsen, A. H., Pedersen, B. P. & Sørensen, Thomas Just, 30 Sep 2020, In: Science Report.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Vi vil advare mod direkte politisk styring af forskningsfinansiering
Vallgårda, Karen Asta Arnfred, Bjørk, R., Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Laustsen, A. H., Pedersen, B. P. & Sørensen, Thomas Just, 1 Oct 2020, In: Altinget.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Flere øremærkede forskningsmidler truer fri forskning
Vallgårda, Karen Asta Arnfred, Andersen, P. E., Bjørk, R., Dalsgaard, P., Damgaard, R. B., Dimke, H., Hansen, N. C., Jauffred, Liselotte, Jønsson, Knud Andreas, Kropp, K., Laustsen, A. H., Møller, Niels Martin, Nielsen, Mathias Wullum, Sørensen, Thomas Just & Nielsen, T. K., 11 Feb 2021, In: Altinget. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Ph.d.-studerende skal ikke udnyttes som billig arbejdskraft
Vallgårda, Karen Asta Arnfred, Sørensen, Thomas Just, Jauffred, Liselotte, Danbolt, Mathias, Bjørk, R., Dalsgaard, P., Dimke, H., Niss, K. & Pedersen, B. P., 30 Jan 2020, In: Altinget. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Fondsmidler trækker forskningen skæv
Vallgårda, Karen Asta Arnfred, Jauffred, Liselotte, Sørensen, Thomas Just, Rasmussen, B., Damgaard, R. B., Dalsgaard, P., Dimke, H., Jønsson, Knud Andreas, Kropp, K., Laustsen, A. H., Møller, Niels Martin & Ellersgaard, C. H., 23 Mar 2021, In: Altinget. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Inden næste epidemi
Vallgårda, Karen Asta Arnfred, Jauffred, Liselotte, Sørensen, Thomas Just, Engberg-Pedersen, Anders, Bjørk, R., Dimke, H., Dalsgaard, P., Kropp, K., Niss, K. & Pedersen, B. P., 1 May 2020, In: Weekendavisen. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Fri forskning er vigtigt – også i krisetider
Vallgårda, Karen Asta Arnfred, Jauffred, Liselotte, Sørensen, Thomas Just, Møller, Niels Martin, Niss, K., Bjørk, R., Dalsgaard, P., Dimke, H. & Pedersen, B. P., 12 May 2020, In: Altinget. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Nej, Ane Halsboe-Jørgensen, forskningsmidler skal ikke bruges på erhvervsstøtte
Vallgårda, Karen Asta Arnfred, Bjørk, R., Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Kropp, K., Laustsen, A. H., Pedersen, B. P. & Sørensen, Thomas Just, 12 Sep 2020, In: Information. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Vedtag en hjælpepakke til yngre forskere
Vallgårda, Karen Asta Arnfred, Dalsgaard, P., Dimke, H., Jauffred, Liselotte, Kropp, K., Laustsen, A. H., Pedersen, B. P., Suhr, C. & Sørensen, Thomas Just, 15 Sep 2020, In: Politiken. 1 p.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Unge forskere: Der er behov for en bedre model til at støtte coronaforsinket forskning
Vallgårda, Karen Asta Arnfred, Andersen, P. E., Jauffred, Liselotte, Sørensen, Thomas Just, Møller, Niels Martin, Jønsson, Knud Andreas, Kristensen, Line Burholt, Bjørk, R., Dalsgaard, P., Dimke, H., Kropp, K., Laustsen, A. H., Nielsen, Mathias Wullum & Rasmussen, Laura Vang, 16 Mar 2021, In: Altinget.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
- Published
Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method
Valentin, J., Andreetta, C., Boomsma, Wouter, Bottaro, S., Ferkinghoff-Borg, J., Frellsen, J., Mardia, K. V., Tian, P. & Hamelryck, Thomas Wim, 2014, In: Proteins: Structure, Function, and Bioinformatics. 82, 2, p. 288-299 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active topological defect absorption by a curvature singularity
Vafa, F., Nelson, D. R. & Doostmohammadi, Amin, 20 Jul 2023, In: Journal of Physics Condensed Matter. 35, 42, 17 p., 425101.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
OBSERVATION OF THE PROTON-PAIRING VIBRATION IN CA-48
VIDEBAEK, F., HANSEN, O., LEVINE, M., Ellegaard, Clive Sigurd, HOATH, S. & NELSON, J., 17 Mar 1986, In: Nuclear Physics A: Nuclear and Hadronic Physics. 451, 1, p. 131-140Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lineage tracing identifies heterogeneous hepatoblast contribution to cell lineages and postembryonic organ growth dynamics
Unterweger, Iris Anne, Klepstad, J., Hannezo, E., Lundegaard, Pia Rengtved, Trusina, Ala & Ober, Elke, 2023, In: PLOS Biology. 21, 10, 30 p., e3002315.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Information Spreading in Epidemics and in Communication Networks
Uekermann, F. P., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Characterization of phase transitions in a model ecosystem of sessile species
Uekermann, F., Mathiesen, Joachim & Mitarai, Namiko, 13 Mar 2017, In: Physical Review E. 95, 3, 032409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the contribution of exposure heterogeneity to the cessation of the 2014 Ebola epidemic
Uekermann, F., Simonsen, L. & Sneppen, Kim, 1 Feb 2019, In: PLoS ONE. 14, 2, 11 p., e0210638.Research output: Contribution to journal › Review › Research › peer-review
- Published
A cross-immunization model for the extinction of old influenza strains
Uekermann, F. & Sneppen, Kim, 2016, In: Scientific Reports. 6, 8 p., 25907.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spreading of multiple epidemics with cross immunization
Uekermann, F. & Sneppen, Kim, 13 Sep 2012, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 86, 3, Part 2, p. 036108 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
NETWORK INFERENCE WITH HIDDEN UNITS
Tyrcha, J. & Hertz, John, 1 Feb 2014, In: Mathematical Biosciences and Engineering. 11, 1, p. 149-165Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of nonstationarity on models inferred from neural data
Tyrcha, J., Roudi, Y. & Hertz, John, 1 Mar 2013, In: Journal of Statistical Mechanics: Theory and Experiment. 2013, P03005.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Human T cell responses to Japanese encephalitis virus in health and disease
Turtle, L., Bali, T., Buxton, G., Chib, S., Chan, S., Soni, M., Hussain, M., Isenman, H., Fadnis, P., Venkataswamy, M. M., Satishkumar, V., Lewthwaite, P., Kurioka, A., Krishna, S., Shankar, M. V., Ahmed, R., Begum, A., Ravi, V., Desai, A., Yoksan, S. & 7 others, , 2016, In: Journal of Experimental Medicine.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Polar jets of swimming bacteria condensed by a patterned liquid crystal
Turiv, T., Koizumi, R., Thijssen, K., Genkin, M. M., Yu, H., Peng, C., Wei, Q., Yeomans, J. M., Aranson, I. S., Doostmohammadi, Amin & Lavrentovich, O. D., 2 Mar 2020, In: Nature Physics. 16, 4, p. 481-487 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Functional alignment of regulatory networks: a study of temperate phages
Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stress induced telomere shortening: longer life with less mutations?
Trusina, Ala, 1 Mar 2014, In: B M C Systems Biology. 8, 27.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Translation attenuation mechanism in unfolded protein response
Trusina, Ala, Papa, F. & Tang, C., 1 Dec 2008, Evolution from Cellular to Social Scales. Skjeltorp, A., Skjeltorp, A. & Belushkin, A. (eds.). p. 83-90 8 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Rationalizing translation attenuation in the network architecture of the unfolded protein response
Trusina, Ala, Papa, F. R. & Tang, C., 23 Dec 2008, In: Proceedings of the National Academy of Sciences USA (PNAS). 105, 51, p. 20280-20285Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The unfolded protein response and translation attenuation: a modelling approach.
Trusina, Ala & Tang, C., Oct 2010, In: Diabetes, Obesity and Metabolism Online. 12, p. 27-31Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hierarchy measures in complex networks
Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Copulas for hydroclimatic analysis: A practice-oriented overview
Tootoonchi, F., Sadegh, M., Härter, Jan Olaf Mirko, Raty, O., Grabs, T. & Teutschbein, C., Mar 2022, In: Wiley Interdisciplinary Reviews: Water. 9, 2, 28 p., 1579.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uni- and multivariate bias adjustment methods in Nordic catchments: Complexity and performance in a changing climate br
Tootoonchi, F., Härter, Jan Olaf Mirko, Todorovic, A., Raty, O., Grabs, T. & Teutschbein, C., 20 Dec 2022, In: Science of the Total Environment. 853, 18 p., 158615.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modelling value bubbles in an attention based economy
Toftdahl Olesen, C. & Sneppen, Kim, 2 Mar 2020, In: European Physical Journal B. 93, 3, 5 p., 36.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Forging the flow of the quantum mechanical current in quantum dots
Tighineanu, P., Stobbe, S. & Lodahl, Peter, 2014, Proceedings of the Nonlinear optics and excitation kinetics in semiconductors, Bremen, Germany. Bremen, GermanyResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
probing electric and magnetic vacuum fluctuations with quantum dots
Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 2014, Nonlinear quantum optics : Workshop, Leiden, the Netherlands, 2014. Leiden, NetherlandsResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Unraveling the Mesoscopic Character of Quantum Dots in Nanophotonics
Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 19 Jun 2015, In: Physical Review Letters. 114, 24, 247401.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of genetic control in the cell: the good and bad of being late
Tiana, G. & Jensen, Mogens Høgh, 28 Sep 2013, In: Philosophical Transactions. Series A : Mathematical, physical, and engineering science. 371, 1999; SI, 20120469.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oscillations and temporal signalling in cells
Tiana, G., Krishna, S., Pigolotti, S., Jensen, Mogens Høgh & Sneppen, Kim, 2008, In: Physical Biology. 4, 2, p. R1-R17Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Monte Carlo Methods Development and Applications in Conformational Sampling of Proteins
Tian, P., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Structure of a functional amyloid protein subunit computed using sequence variation
Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Monte Carlo study of the early steps of functional amyloid formation
Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Robust estimation of diffusion-optimized ensembles for enhanced sampling
Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
What does evolution tell us about the structure of a functional amyloid protein?
Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Decision Making in Biological Systems
Tian, C., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 188 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases
Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation
Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bifurcation of transition paths induced by coupled bistable systems
Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Model Study of the Pressure Build-Up during Subcutaneous Injection
Thomsen, M., Hernandez Garcia, A., Mathiesen, Joachim, Poulsen, Mette Homann, Sørensen, D., Tarnow, L. & Feidenhans'l, Robert Krarup, 14 Aug 2014, In: PLoS ONE. 9, 8, e104054.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Is a constant low-entropy process at the root of glycolytic oscillations?
Thoke, H. S., Olsen, L. F., Duelund, L., Stock, R. P., Heimburg, Thomas Rainer & Bagatolli, L. A., Sep 2018, In: Journal of Biological Physics. 44, 3, p. 419-431Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Activity-induced instabilities of brain organoids
Thijssen, K., Kusters, G. L. A. & Doostmohammadi, Amin, 7 Dec 2021, In: The European Physical Journal E: Soft Matter and Biological Physics. 44, 12, 8 p., 147.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Necking and failure of a particulate gel strand: signatures of yielding on different length scales
Thijssen, Kristian, Liverpool, T. B., Royall, P. C. & Jack, R. L., 2023, In: Soft Matter. 19, 38, p. 7412-7428 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active nematics with anisotropic friction: the decisive role of the flow aligning parameter
Thijssen, K., Metselaar, L., Yeomans, J. M. & Doostmohammadi, Amin, 28 Feb 2020, In: Soft Matter. 16, 8, p. 2065-2074 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Binding self-propelled topological defects in active turbulence
Thijssen, K. & Doostmohammadi, Amin, 13 Oct 2020, In: Physical Review Research. 2, 4, 6 p., 042008.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measurement of the spin-forbidden decay rate (3s3d)1D2¿(3s3p)3 P2,1 in 24Mg
Therkildsen, K. T., Jensen, B. B., Ryder, C. P., Malossi, N. & Thomsen, Jan Westenkær, 2009, In: Physical Review A (Atomic, Molecular and Optical Physics). 79, 3, p. 034501 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantitative analysis of single particle trajectories: mean maximal excursion method
Tejedor...[et al.], V., Benichou, O., Voituriez, R. & Oddershede, L. B., 7 Apr 2010, In: Biophysical Journal. 98, 7, p. 1364-1372 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rotation-limited growth of three-dimensional body-centered-cubic crystals
Tarp, J. M. & Mathiesen, Joachim, 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 012409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enforced Scale Selection in Field Theories of Mechanical and Biological Systems
Tarp, J. M., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 50 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Intermittent dislocation density fluctuations in crystal plasticity from a phase-field crystal model
Tarp, J. M., Angheluta, L., Mathiesen, Joachim & Goldenfeld, N., 31 Dec 2014, In: Physical Review Letters. 113, 26, 265503.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast intra-fractional image-guidance with 6D positioning correction reduces delivery uncertainty for stereotactic radiosurgery and radiotherapy
Tarnavski, N., Engelholm, S. A. & Munck af Rosenschöld, P. M., 2 Aug 2016, In: Journal of Radiosurgery and SBRT. 4, 1, p. 15-20Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database
Tang, Q., Ren, W., Wang, J. & Kaneko, Kunihiko, 7 Oct 2022, In: Molecular Biology and Evolution. 39, 10, 13 p., msac197.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined
Takeuchi, N., Mitarai, Namiko & Kaneko, Kunihiko, 4 Feb 2022, In: Genetics. 220, 2, 9 p., 182.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ecology and evolution in the RNA world dynamics and stability of prebiotic replicator systems
Szilágyi, A., Zachar, I., Scheuring, I., Könnyű, B. & Czárán, T., 2017, In: Life. 7, 4, 48.Research output: Contribution to journal › Review › Research › peer-review
- Published
Dynamics and stability in prebiotic information integration: an RNA World model from first principles
Szilagyi, A., Konnyu, B. & Czaran, T., 9 Jan 2020, In: Scientific Reports. 10, 1, 11 p., 51.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Texture of the upper 1000 m in the GRIP and NorthGRIP ice cores
Svensson, Anders, Durand, G., Mathiesen, Joachim, Persson, A. & Dahl-Jensen, Dorthe, 2009, Low Temperature Science Supplement Issue: Physics of Ice Core Records II. Hondoh, T. (ed.). Institute of Low Temperature Science, Hokkaido University, Sapporo Japan, Vol. 68. p. 107-113 7 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Commitment to lysogeny is preceded by a prolonged period of sensitivity to the late lytic regulator Q in bacteriophage Λ
Svenningsen, Sine Lo & Semsey, S., 2014, In: Journal of Bacteriology. 196, 20, p. 3582-3588 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse
Svenningsen, Mikkel Skjoldan, Svenningsen, Sine Lo, Sørensen, Michael Askvad & Mitarai, Namiko, 2022, In: Life Science Alliance. 5, 2, 9 p., e202101076.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stochastic Bacterial Growth and Survival
Svenningsen, Mikkel Skjoldan, 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 139 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells
Svenningsen, Mikkel Skjoldan, Veress, A., Harms, A., Mitarai, Namiko & Semsey, S., 15 Apr 2019, In: Scientific Reports. 9, 13 p., 6056.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene Expression Changes with Minor Effects on the Population Average Have Major Effects on the Occurrence of Cells with Extreme Protein Concentrations
Svenningsen, Mikkel Skjoldan, Semsey, S. & Mitarai, Namiko, 2019, In: mSphere. 4, 1, p. 1-6 e00575-18.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quadrupolar active stress induces exotic patterns of defect motion in compressible active nematics
Sultan, S. A., Nejad, M. R. & Doostmohammadi, Amin, 7 May 2022, In: Soft Matter. 18, p. 4118-4126 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemophoresis engine: A general mechanism of ATPase-driven cargo transport
Sugawara, T., Morozov, A. V. (ed.) & Kaneko, Kunihiko, 25 Jul 2022, In: PLOS Computational Biology. 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SuperSegger: Robust image segmentation, analysis and lineage tracking of bacterial cells
Stylianidou, S., Brennan, C., Nissen, Silas Boye, Kuwada, N. J. & Wiggins, P. A., 11 Nov 2016, In: Molecular Microbiology. 102, 4, p. 690-700 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A kinetic mechanism for cell sorting based on local variations in cell motility
Strandkvist, C., Juul, J., Baum, B., Kabla, A. J. & Duke, T., 6 Dec 2014, In: Interface Focus. 4, 6, 20140013.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asymmetric Segregation of Damaged Cellular Components in Spatially Structured Multicellular Organisms
Strandkvist, C., Juul, J. S. & Bendtsen, K. M., 13 Feb 2014, In: PLoS ONE. 9, 2, e87917.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How Physical Proximity Shapes Complex Social Networks
Stopczynski, A., Pentland, A. '. & Lehmann, S., 7 Dec 2018, In: Scientific Reports. 8, 17722.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal fidelity in dynamic social networks
Stopczynski, A., Sapiezynski, P., Pentland, A. '. & Jørgensen, Sune Lehmann, 7 Oct 2015, In: European Physical Journal B. Condensed Matter and Complex Systems. 88, 10Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling the two-hybrid detector: Experimental bias on protien interaction networks
Stibius, K. & Sneppen, Kim, 2007, In: Biophysical Journal. 93, 7, p. 2562-2566Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Short-range growth inhibitory signals from the epithelium can drive non-stereotypic branching in the pancreas
Dahl-Jensen, Svend Bertel, Figueiredo-Larsen, E. M., Botton, A. & Sneppen, Kim, 23 Feb 2016, In: Physical Biology. 13, 1, 016007.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
L'enseignement de la physique au Danemark
Steenstrup, S., 1995, L'enseignement de la physique pour l'Europe de demain. Commission des Communantes Europeennes, p. DK1-DK7Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Reconstructing SPECT images using the Maximum Entropy Principle and including the Effect of Collimation
Steenstrup, S., 1991, In: Physica Medica. 3-4/VI, p. 273-277Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Maximum-Entropy Method without the Positivity Constraint - Applications to the Determination of the Distance-Distribution Function in Small-Angle Scattering
Steenstrup, S. & Hansen, S., 1994, In: Journal of Applied Crystallography. 27, p. 574-580Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physics Studies in Denmark
Steenstrup, S., 1995, Physics Studies for Tomorrow's Europe. Commission of the European Communities, p. DK1-DK7Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Cooke–Triplet tweezers: more compact, robust, and efficient optical tweezers
Stangner, T., Dahlberg, T., Svenmarker, P., Zakrisson, J., Wiklund, K., Oddershede, L. B. & Andersson, M., 26 Mar 2018, In: Optics Letters. 43, 9, p. 1990-1993Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Static and Dynamic Disorder Observed in the Phase Transition Behavior of Individual Small Unilamellar Vesicles
Stamou, Dimitrios, Bendix, Poul Martin, Wibroe, P. P. & Hatzakis, Nikos, 2011, In: Biophysical Journal. 100, 3 suppl 1, p. 35a 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Membrane Curvature Regulates the Localization of G Protein Coupled Receptors and Ras Isoforms
Stamou, Dimitrios, Rosholm, K. R., Damalas, A., Hatzakis, Nikos, Wirth, V. F., Martinez, Karen Laurence, Leijnse, Natascha, Oddershede, L. B., Bendix, Poul Martin & Pedersen, S. L., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 95a-96aResearch output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-Wide Screening of Genes Regulated by DNA Methylation in Colon Cancer Development
Spisak, S., Kalmar, A., Galamb, O., Wichmann, B., Sipos, F., Péterfia, B., Csabai, I., Kovalszky, I., Semsey, S., Tulssay, Z. & Molnár, B., 1 Oct 2012, In: P L o S One. 7, 10, p. e46215Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stabilization of epigenetic states of CpG islands by local cooperation
Sormani, G., Härter, Jan Olaf Mirko, Lövkvist, Cecilia & Sneppen, Kim, 2016, In: Molecular BioSystems. 12, 7, p. 2142-2146Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Counting function for a sphere of anisotropic quartz
Sondergaard, N., Guhr, T., Oxborrow, M., Schaadt, K. & Ellegaard, Clive Sigurd, 1 Sep 2004, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 70, 3, 036206.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal NF-kappa B dynamics encodes the position, amplitude, and duration of local immune inputs
Son, M., Frank, T., Holst-Hansen, T., Wang, A. G., Junkin, M., Kashaf, S. S., Trusina, Ala & Tay, S., 2 Sep 2022, In: Science Advances. 8, 35, 14 p., 6240.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantitative determination of optical trapping strength and viscoelastic moduli inside living cells
Soler, J. M., Richardson, A. C., Seyyed Reihani, S. N., Oddershede, L. B. & Berg-Sørensen, K., 1 Aug 2013, In: Physical Biology. 10, 4, 046006.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and communication in complex networks
Sneppen, Kim, 2006, In: NATO Science Series : Sub Series III, Computer and sytems sciences. p. 1-28Research output: Contribution to journal › Conference article › Research › peer-review
- Published
A minimal model for multiple epidemics and immunity spreading
Sneppen, Kim, Trusina, Ala, Jensen, Mogens Høgh & Bornholdt, S., 18 Oct 2010, In: PLoS ONE. 5, 10, p. e13326Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Economy of operon formation: cotranscription minimizes shortfall in protein complexes
Sneppen, Kim, Pedersen, Steen, Krishna, S., Dodd, I. B. & Semsey, S., 21 Sep 2010, In: Microbe. 1, 4, p. e00177-10Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simplified models of biological networks
Sneppen, Kim, Krishna, S. & Semsey, S., 4 Jan 2010, In: Annual Review of Biophysics and Biomolecular Structure. 9, 39, p. 43-59 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A communication perspective on network topologies
Sneppen, Kim & Rosvall, M., 2006, In: Progress of Theoretical Physics. Supplement. p. 103-118Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Models of life: Dynamics and regulation in biological systems
Sneppen, Kim, 5 Oct 2014, Cambridge University Press ed. Cambridge. 342 p.Research output: Book/Report › Book › Research › peer-review
- Published
Theoretical analysis of Polycomb-Trithorax systems predicts that poised chromatin is bistable and not bivalent
Sneppen, Kim & Ringrose, L., 13 May 2019, In: Nature Communications. 10, 18 p., 2133.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Globalization in a nutshell
Sneppen, Kim & Bornholdt, S., 29 Oct 2018, In: Physical Review E. 98, 4, 6 p., 022314.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Overdispersion in COVID-19 increases the effectiveness of limiting nonrepetitive contacts for transmission control
Sneppen, Kim, Nielsen, Bjarke Frost, Taylor, R. J. & Simonsen, L., 6 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 14, 6 p., 2016623118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleosome dynamics and maintenance of epigenetic states of CpG islands
Sneppen, Kim & Dodd, I. B., 28 Jun 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 6, 062417.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae
Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Models of life: epigenetics, diversity and cycles
Sneppen, Kim, 1 Apr 2017, In: Reports on Progress in Physics. 80, 4, 042601.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ultrasensitive gene regulation by positive feedback loops in nucleosome modification
Sneppen, Kim, Micheelsen, M. A. & Dodd, I. B., 15 Apr 2008, In: Molecular Systems Biology. 4, p. 182Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome
Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Restriction modification systems as engines of diversity
Sneppen, Kim, Semsey, S., Seshasayee, A. S. N. & Krishna, S., 2 Jun 2015, In: Frontiers in Microbiology. 6, 528.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simple histone code opens many paths to epigenetics
Sneppen, Kim & Dodd, I. B., 2012, In: P L o S Computational Biology. 8, 8, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multistability with a Metastable Mixed State
Sneppen, Kim & Mitarai, Namiko, 5 Sep 2012, In: Physical Review Letters. 109, 10, p. 100602 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling proteasome dynamics in Parkinson's disease
Sneppen, Kim, Lizana, G. L., Jensen, Mogens Høgh, Pigolotti, S. & Otzen, D., 2009, In: Physical Biology. 6, 3, p. 036005Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hide-and-seek on complex networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Mar 2005, In: EPL. 69, 5, p. 853-859Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measuring information networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Jun 2005, In: Pramana – Journal of Physics. 64, 6, p. 1121-1125Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epigenetic switching with asymmetric bridging interactions
Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative network analysis of preterm vs. full-term infant-mother interactions
Sipos, L., Mengel, A. B., Kalmar, M., Toth, I., Krishna, S., Jensen, Mogens Høgh & Semsey, S., 2013, In: P L o S One. 8, 6, 10 p., e67183.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A universal power law and proportionate change process characterize the evolution of metabolic networks
Singh, S., Samal, A., Giri, V. & Krishna, S., 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 1, p. 75-80Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fractionated photothermal therapy in a murine tumor model: comparison with single dose
Simón, M., Nørregaard, K., Jørgensen, Jesper Tranekjær, Oddershede, L. B. & Kjær, Andreas, Jul 2019, In: International Journal of Nanomedicine. 14, p. 5369—5379Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fear and its implications for stock markets
Simonsen, I., Ahlgren, P. H., Jensen, Mogens Høgh, Danangelo, R. & Sneppen, Kim, 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 2, p. 153-158Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nonideal behavior of intramolecular structure factor of dilute polymers in a theta solvent
Shimomura, K., Nakanishi, H. & Mitarai, Namiko, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 80, 5, Part 1, p. 051804Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes
Shah, P., Cho, S. K., Thulstrup, Peter Waaben, Bhang, Y., Ahn, J. C., Choi, S. W., Rørvig-Lund, A. & Yang, S. W., 2014, In: Nanotechnology. 25, 4, 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
4D Neutron Imaging of Solute Transport and Fluid Flow in Sandstone Before and After Mineral Precipitation
Shafabakhsh, P., Cordonnier, B., Pluymakers, A., Le Borgne, T., Mathiesen, Joachim, Linga, G., Hu, Y., Kaestner, A. & Renard, F., 13 Mar 2024, In: Water Resources Research. 60, 3, 19 p., e2023WR036293.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Significant improvement of optical traps by tuning standard water immersion objectives
Seyyed Reihani, S. N., Richardson, A. C. & Oddershede, L. B., 1 Oct 2011, In: Journal of Optics. 13, 10, p. 105301Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulatory genes
Semsey, S. & Adhya, S., 2013, Brenner’s online encyclopedia of genetics (Second edition). Maloy, S. & Hughes, K. (eds.). Academic Press, 119 p. 4Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research › peer-review
- Published
Dynamics of the recovery from sRNA-mediated gene silencing
Semsey, S., Bemjamin, J., Mitarai, Namiko, Krishna, S., Csiszovszki, Z., Sneppen, Kim & Masse, E., 2009, In: Cell Cycle. 8, 18, p. 2863-2864 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mutations in Transcriptional Regulators Allow Selective Engineering of Signal Integration Logic
Semsey, S., 25 May 2014, In: mBio (Print). 5, 3, e01171.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli
Semsey, S., Jauffred, Liselotte, Csiszovszki, Z., Erdossy, J., Steger, V., Hansen, S. & Krishna, S., 1 Jul 2013, In: Nucleic Acids Research. 41, 13, p. 6381-6390Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Signal integration in the galactose network of Escherichia coli
Semsey, S., Krishna, S., Sneppen, Kim & Adhya, S., 2007, In: Molecular Microbiology. 65, 2, p. 465-476Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Mixed Incoherent Feed-Forward Loop Allows Conditional Regulation of Response Dynamics
Semsey, S., 12 Mar 2014, In: P L o S One. 9, 3, e91243.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dominant negative autoregulation limits steady-state repression levels in gene networks
Semsey, S., Krishna, S., Erdossy, J., Horvath, P., Orosz, L., Sneppen, Kim & Adhya, S., 2009, In: Journal of Bacteriology. 191, 14, p. 4487-4491 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking cell-nanoparticle interactions
Selhuber-Unkel, C. J. M., 1 Dec 2009, In: Journal of Biomedical Nanotechnology. 5, 6, Sp.Iss. Sl., p. 634-640 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantitative optical trapping of single gold nanorods
Selhuber-Unkel, C., Zins, I., Schubert, O., Soennichsen, C. & Oddershede, L. B., 2008, In: Nano Letters. 8, 9, p. 2998-3003Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variety in intracellular diffusion during the cell cycle
Selhuber-Unkel, C., Yde, P., Berg-Sørensen, K. & Oddershede, L. B., 2009, In: Physical Biology. 6, 2, p. 025015Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variety in intracellular diffusion during the cell cycle
Selhuber-Unkel, C., Yde, Pernille, Berg-Sorensen, K. & Oddershede, L. B., Jun 2009, In: Physical Biology. 6, 2, 9 p., 025015.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The chaperone effect in scientific publishing
Sekara, V., Deville, P., Ahnert, S. E., Barabasi, A., Sinatra, R. & Lehmann, S., 11 Dec 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 50, p. 12603-12607Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fundamental structures of dynamic social networks
Sekara, V., stopczynski, A. & Lehmann, S., 6 Sep 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 36, p. 9977-9982 6 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
The Strength of Friendship Ties in Proximity Sensor Data
Sekara, V. & Jørgensen, S. L., 7 Jul 2014, In: P L o S One. 9, 7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Domain size and fluctuations at domain interfaces in lipid mixtures
Seeger, H., Fidorra, M. & Heimburg, Thomas Rainer, 2005, In: Biocolloids. 219, p. 85-96Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extracting, quantifying, and comparing dynamical and biomechanical properties of living matter through single particle tracking
Scott, S., Weiss, M., Selhuber-Unkel, C., Farhangibarooji, Younes, Sabri, A., Erler, Janine, Metzler, R. & Oddershede, L. B., 22 Dec 2022, In: Physical Chemistry Chemical Physics. 2023, 25, p. 1513-1537 26 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Conformation Regulation of the X Chromosome Inactivation Center: a model
Scialdone, A., Cataudella, I., Barbieri, M. & Nicodemi, M., 1 Oct 2011, In: P L o S Computational Biology. 7, 10, p. e1002229Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural Rearrangements of Pigeon Cryptochrome 4 Undergoing a Complete Redox Cycle
Schuhmann, Fabian Johannes, Ramsay, J. L., Kattnig, D. R. & Solov’yov, I. A., 3 Apr 2024, In: The Journal of Physical Chemistry B. 128, 16, p. 3844-3855 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Amplitude equation and long-rang interactions in underwater sand ripples in one dimension
Schnipper, T., Mertens, K., Ellegaard, Clive Sigurd & Bohr, T., 1 Oct 2008, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 78, 4, 047301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical trapping of gold aerosols
Schmitt, R. K., Jauffred, Liselotte, Taheri, S. M., Linke, H. & Oddershede, L. B., 25 Aug 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE - International Society for Optical Engineering, Vol. 9548. 95480F-1Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Tuning of Recombinant Protein Expression in Escherichia coli by Manipulating Transcription, Translation Initiation Rates, and Incorporation of Noncanonical Amino Acids
Schlesinger, O., Chemla, Y., Heltberg, Mathias Spliid, Ozer, E., Marshal, R., Noireaux, V., Jensen, Mogens Høgh & Alfonta, L., 23 Feb 2017, In: A C S Synthetic Biology. 6, 6, p. 1076-1085Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sand ripples under water with complex wave motion
Scheibye-Knudsen, K., Ellegaard, Clive Sigurd, Bundgaard, F. & Sams, T., 1 Jul 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 72, 1, 016209.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ultrasound resonances in a rectangular plate described by random matrices
Schaadt, K., Simon, G. & Ellegaard, Clive Sigurd, 13 Jun 2001, In: Physica Scripta. T90, p. 231-237Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Experiments on elastomechanical wave functions in chaotic plates and their statistical features
Schaadt, K., Guhr, T., Ellegaard, Clive Sigurd & Oxborrow, M., 1 Sep 2003, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 68, 3, 036205.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chaotic sound waves in a regular billiard
Schaadt, K., Tufaile, A. & Ellegaard, Clive Sigurd, 1 Feb 2003, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 67, 2, Part 2, 026213.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prediction of cross-fitness for adaptive evolution to different environmental conditions: Consequence of phenotypic dimensional reduction
Sato, T. U., Furusawa, C. & Kaneko, Kunihiko, 11 Dec 2023, In: Physical Review Research. 5, 4, 14 p., 043222.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Are Local Anesthetics and General Anesthetics Different?
Sasse-Middelhoff, H., Zecchi, K. & Heimburg, Thomas Rainer, 28 Jan 2014, In: Biophysical Society. Annual Meeting. Abstracts. 106, 2, p. 705A-705AResearch output: Contribution to journal › Journal article › Research › peer-review
- Published
Sputtering of Copper Crystals by Soluble and Nonsoluble Ions
Sarholt-Kristensen, L., Johansen, A., Johnson, Erik, Steenstrup, S., Chechenin, N. & Chernysh, V. S., 1991, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. B59/60, p. 85-88Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking Human Mobility Using WiFi Signals
Sapiezynski, P., Stopczynski, A., Gatej, R. & Jørgensen, Sune Lehmann, 1 Jul 2015, In: PloS one. 10, 7, 013024.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Activity Induced Nematic Order in Isotropic Liquid Crystals
Santhosh, S., Nejad, M. R., Doostmohammadi, Amin, Yeomans, J. M. & Thampi, S. P., 12 Feb 2020, In: Journal of Statistical Physics. 180, 1-6, p. 699-709 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Value of Example Solutions in Pharmacy Education: The role of seniority and gender.
Sandelin, Albin Gustav, Hansen, H. R., Baldursdóttir, S. G., Kristensen, Anders Skov, Bak, Lasse Kristoffer, Christiansen, Frederik Voetmann & Selhuber-Unkel, C. J. M., 2011, In: Pharmacy Education. 11, 1, p. 32-37 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The fitness cost and benefit of phase-separated protein deposits
Sanchez de Groot, N., Torrent Burgas, M., Ravarani, C. N. J., Trusina, Ala, Ventura, S. & Babu, M. M., Apr 2019, In: Molecular Systems Biology. 15, 4, e8075.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Morphological Instabilities in a growing Yeast Colony: Experiment and Theory
Sams, T., Jensen, Mogens Høgh, Sneppen, Kim, Christensen, B., Ellegaard, Clive Sigurd & Thrane, U., 14 Jul 1997, In: Physical Review Letters. 79, 2, p. 313-316Research output: Contribution to journal › Journal article › Research
- Published
Low degree metabolites explain essential reactions and enhance modularity in biological networks
Samal...[et al.], A. & Krishna, S., 2006, In: BMC Bioinformatics. 7, 118Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical manipulation of individual strongly absorbing platinum nanoparticles
Samadi, A., Bendix, Poul Martin & Oddershede, L. B., 14 Dec 2017, In: Nanoscale. 9, 46, p. 18449-18455Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Platinum nanoparticles: a non-toxic, effective and thermally stable alternative plasmonic material for cancer therapy and bioengineering
Samadi, A., Klingberg, H., Jauffred, Liselotte, Kjær, Andreas, Bendix, Poul Martin & Oddershede, L. B., 21 May 2018, In: Nanoscale. 10, 19, p. 9097-9107 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical trapping of individual magnetic nanoparticles
Samadi, A., Wang, M., Yang, Y. & Oddershede, L. B., 19 Aug 2018, Optical Trapping and Optical Micromanipulation XV. SPIE - International Society for Optical Engineering, Vol. 10723. 107230E. (Proceedings of SPIE).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Optical control of strongly absorbing nanoparticles and their potential for photothermal treatment
Samadi, A., Jauffred, Liselotte, Klingberg, H., Bendix, Poul Martin & Oddershede, L. B., 1 Mar 2019, In: Proceedings of SPIE. 10935, 109351A.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Backscattering-based detection scheme for dark-field optical tweezers
Samadi, A., Mousavi, S. M., Hajizadeh, F. & Reihani, S. N. S., 1 Jun 2019, In: Journal of the Optical Society of America B: Optical Physics. 36, 6, p. 1587-1593Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of coupling asymmetry on mean-field solutions of the direct and inverse Sherrington-Kirkpatrick model
Sakellariou, J., Roudi, Y., Mezard, M. & Hertz, John, 2012, In: Philosophical Magazine. 92, 1-3, p. 272-279 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary shaping of low-dimensional path facilitates robust and plastic switching between phenotypes
Sakata, A. & Kaneko, Kunihiko, 26 Dec 2023, In: Physical Review Research. 5, 4, 19 p., 043296.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nematic order condensation and topological defects in inertial active nematics
Saghatchi, R., Yildiz, M. & Doostmohammadi, Amin, 25 Jul 2022, In: Physical Review E. 106, 1, 9 p., 014705.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
QUASI-FREE ((D)OVER-RIGHT-ARROW, HE-2) DATA
SAMS, T., Ellegaard, Clive Sigurd, GAARDE, C., LARSEN, J., BOYARD, J., HENNINO, T., JOURDAIN, J., RAMSTEIN, B., ROYSTEPHAN, M., RADVANYI, P., BROCKSTEDT, A., OSTERLUND, M., ZUPRANSKI, P., GOODMAN, C., ICHIMURA, M. & DMITRIEV, V., 1 Apr 1995, In: Physical Review C (Nuclear Physics). 51, 4, p. 1945-1960Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spontaneous flows and dynamics of full-integer topological defects in polar active matter
Rønning, J., Renaud, J., Doostmohammadi, Amin & Angheluta, L., 21 Jul 2023, In: Soft Matter. 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification and comparison of visibility and image artifacts of a new liquid fiducial marker in a lung phantom for image-guided radiation therapy
Rydhog, J. S., Jolck, R. I., Andresen, T. L. & Munck af Rosenschöld, P. M., Jun 2015, In: Medical Physics. 42, 6, p. 2818-2826Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of energy metabolism on protein motility in the bacterial outer membrane
Ryder, T. W., Xu, L., Berg-Sørensen, K., Brown, Stanley & Oddershede, L. B., 2009, In: Biophysical Journal. 97, 5, p. 1305-1312 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of energy metabolism and membrane structure on single ¿-receptor motility
Ryder, T. W., 2009, København: Museum Tusculanum. 101 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Effect of antibiotics and antimicrobial peptides on single protein motility
Ryder, T. W. & Oddershede, L. B., 2009, In: Current Pharmaceutical Biotechnology. 10, 5, p. 486-493 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Close, but not too close: a mesoscopic description of (a)symmetry and membrane shaping mechanisms
Thusgaard Ruhoff, Victoria, Bendix, Poul Martin & Pezeshkian, Weria, 16 Jan 2023, In: Emerging topics in life sciences. 7, 1, p. 81-93 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strength in numbers: effect of protein crowding on the shape of cell membranes
Thusgaard Ruhoff, Victoria, Moreno Pescador, Guillermo Sergio, Pezeshkian, Weria & Bendix, Poul Martin, 31 Oct 2022, In: Biochemical Society Transactions. 50, 5, p. 1257-1267 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Mean Field Theory for Nonequilibrium Network Reconstruction
Roudi, Y. & Hertz, John, 28 Jan 2011, In: Physical Review Letters. 106, 4, p. 048701 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ising model for neural data: Model quality and approximate methods for extracting functional connectivity
Roudi, Y., Tyrcha, J. & Hertz, John, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 5, p. 051915 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistical physics of pairwise probability models
Roudi, Y., Aurell, E. & Hertz, John, 2009, In: Frontiers in Computational Neuroscience. 3, 22, p. (art 22) 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamical TAP equations for non-equilibrium Ising spin glasses
Roudi, Y. & Hertz, John, 31 Mar 2011, In: Journal of Statistical Mechanics: Theory and Experiment. 2011, 3, p. P03031 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-neuronal activity and functional connectivity in cell assemblies
Roudi, Y., Dunn, B. & Hertz, John, 8 Nov 2014, In: Current Opinion in Neurobiology. 32, p. 38-44Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of the central intermediate in the extra-embryonic to embryonic endoderm transition through single-cell transcriptomics
Rothová, M. M., Nielsen, Alexander Valentin, Proks, Martin, Wong, Yan Fung, Riveiro, A. R., Linneberg-Agerholm, Madeleine, David, E., Amit, I., Trusina, Ala & Brickman, Joshua Mark, 2022, In: Nature Cell Biology. 24, 6, p. 833-844 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Network models of phage-bacteria coevolution
Rosvall, M., Dodd, I. B., Krishna, S. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 6, p. 066105Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Networks and our limited information horizon
Rosvall, M. & Sneppen, Kim, 2007, In: International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 17, 7, p. 2509-2515Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reinforced communication and social navigation generate groups in model networks
Rosvall, M. & Sneppen, Kim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 2, Part 2, p. 026111Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Networks and Cities: An Information Perspective
Rosvall, M., Trusina, Ala, Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review Letters. 94, 2, 028701.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-range ordered vorticity patterns in living tissue induced by cell division
Rossen, Ninna Struck, Tarp, J. M., Mathiesen, Joachim, Jensen, Mogens Høgh & Oddershede, L. B., 8 Dec 2014, In: Nature Communications. 5, 5720.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical Investigations of Endothelial Cell Motility
Rossen, Ninna Struck, 2013, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Arachidonic Acid Randomizes Endothelial Cell Motion and Regulates Adhesion and Migration
Rossen, Ninna Struck, Hansen, A., Oddershede, L. B. & Selhuber-Unkel, C. J. M., 23 Sep 2011, In: PLoS ONE. 6, 9, p. e25196Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fiber finding algorithm using stepwise tracing to identify biopolymer fibers in noisy 3D images
Rossen, Ninna Struck, Kyrsting, A., Giaccia, A. J., Erler, Janine & Oddershede, L. B., 2021, In: Biophysical Journal. 120, 18, p. 3860-3868 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-assembly based on hydrotropic counterion - Single-chain amphiphile ion pairs
Rosholm, K. R., Gonzalez-Perez, Alfredo & Mouritsen, Ole G., 1 Oct 2010, In: Colloid and Polymer Science. 288, 14-15, p. 1351-1357 7 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Membrane curvature regulates ligand-specific membrane sorting of GPCRs in living cells
Rosholm, K. R., Leijnse, Natascha, Mantsiou, A., Tkach, Vadym, Pedersen, S. L., Wirth, V. F., Oddershede, L. B., Jensen, Knud Jørgen, Martinez, Karen Laurence, Hatzakis, Nikos, Bendix, Poul Martin, Callan-Jones, A. & Stamou, Dimitrios, 8 May 2017, In: Nature Chemical Biology. 13, 7, p. 724-729Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vesicle Fusion Triggered by Optically Heated Gold Nanoparticles
Rorvig-Lund, A., Bahadori, Azra, Semsey, S., Bendix, Poul Martin & Oddershede, L. B., 1 Jun 2015, In: Nano Letters. 15, 6, p. 4183-4188Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantifying Force and Viscoelasticity Inside Living Cells Using an Active-Passive Calibrated Optical Trap
Ritter, C. M., Mas, J., Oddershede, L. & Berg-Sørensen, K., 20 Mar 2017, In: Methods in molecular biology (Clifton, N.J.). 1486, p. 513-536 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viscoelastic and dynamic properties of embryonic stem cells
Ritter, C., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Optical quantification of forces at play during stem cell differentiation
Ritter, C., Brickman, Joshua Mark & Oddershede, L. B., 4 Mar 2016, In: Proceedings of S P I E - International Society for Optical Engineering. 9764, UNSP 97640J.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Critical Influence of Cosolutes and Surfaces on the Assembly of Serpin-Derived Amyloid Fibrils
Risor, M. W., Juhl, D. W., Bjerring, M., Mathiesen, Joachim, Enghild, J. J., Nielsen, N. C. & Otzen, D. E., 8 Aug 2017, In: Biophysical Journal. 113, 3, p. 580-596Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extending the lateral trapping force of optical tweezers - art. no. 664420
Richardson, A. C., Seyyed Reihani, S. N. & Oddershede, L. B., 2007, PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS: OPTICAL TRAPPING AND OPTICAL MICROMANIPULATION IV. SPIE - International Society for Optical Engineering, Vol. 6644. p. 64420-64420Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Non-harmonic potential of a single beam optical trap
Richardson, A. C., S. Reihani, S. N. & Oddershede, L. B., 2008, In: Optics Express. 16, 20, p. 15709-15717 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Basement membrane stiffness determines metastases formation
Reuten, R., Zendehroud, S., Nicolau, M., Fleischhauer, L., Laitala, A., Kiderlen, S., Nikodemus, D., Wullkopf, L., Nielsen, S. R., Mcneilly, S., Prein, C., Rafaeva, M., Schoof, E. M., Furtwängler, B., Porse, B. T., Kim, H., Won, K. J., Sudhop, S., Zornhagen, K. W., Suhr, F. & 11 others, , 2021, In: Nature Materials. 20, p. 892–903Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Critical Evolution of Damage Toward System-Size Failure in Crystalline Rock
Renard, F., Weiss, J., Mathiesen, Joachim, Ben-zion, Y., Kandula, N. & Cordonnier, B., 1 Feb 2018, In: Journal of Geophysical Reseach. 123, 2, p. 1969-1986Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pancreatic alpha and beta cells are globally phase-locked
Ren, H., Li, Y., Han, C., Yu, Y., Shi, B., Peng, X., Wu, S., Yang, X., Sneppen, Kim, Chen, L., Tang, C. & Zhang, T., 28 Jun 2022, In: Nature Communications. 13, 1, 16 p., 3721.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Executive attention control impairments and social anxiety symptoms in children
Reinholdt-Dunne, M. L., Blicher, A., Rinck, M. & Klein, A., 2022, In: Journal of Experimental Psychopathology. 13, 2, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Confocal microscopy of thick specimens
Reihani, S. N. S. & Oddershede, L. B., 2009, In: Journal of Biomedical Optics. 14, 3, p. 030513-030513-3 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vesicle Fusion Observed by Content Transfer across a Tethered Lipid Bilayer
Rawle, B., Lengerich, B., Cheung, M., Bendix, Poul Martin & Boxer, S., 19 Oct 2011, In: Biophysical Journal. 101, 8, p. L37-L39 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chaotic Dynamics Mediate Brain State Transitions, Driven by Changes in Extracellular Ion Concentrations
Rasmussen, R., Jensen, Mogens Høgh & Heltberg, Mathias Spliid, 27 Dec 2017, In: Cell Systems. 5, 6, p. 591-603Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical tweezers cause physiological damage to Escherichia coli and Listeria bacteria
Rasmussen, M. B., Oddershede, L. B. & Siegumfeldt, H., 2008, In: Applied and Environmental Microbiology. 74, 8, p. 2441-2446Research output: Contribution to journal › Journal article › Research › peer-review
- Published
2H(3He, t)2p reaction at 2 GeV
Ramstein, B., Mosbacher, C., Hennino, T., Augustyniak, W., Bachelier, D., Bohlen, H. G., Boyard, J. L., Dahl, R. & Ellegaard, Clive Sigurd, 1 Apr 2003, In: European Physical Journal A. 16, 4, p. 583-597Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Delta Production and propagation in nuclei
Ramstein, B., Rousteau, S., Hennino, T., Boyard, JL., Dahl, R., Ellegaard, C., Gaarde, C., Gosset, J., Jourdain, JC., Kagarlis, M., Larsen, JS., Lemaire, MC., LHote, D., Morsch, HP., Osterlund, M., Radvanyi, P., RoyStephan, M., Sams, T., Skousen, M., Spang, W. & 1 others, , 1 Nov 1996, In: Acta Physica Polonica B. 27, 11, p. 3229-3240Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inclusive H-2(He-3,t) reaction at 2 GeV
Ramstein, B., Mosbacher, C., Bachelier, D., Berquist, I., Boivin, M., Boyard, J., Brockstedt, A., Carlen, L., Dahl, R., Ekstrom, P., Ellegaard, Clive Sigurd, Gaarde, C., Hennino, T., Jourdain, J., Goodman, C., Larsen, J., Radvanyi, P. & Roy-Stephan, M., 1 Oct 1999, In: The European Physical Journal A: Hadrons and Nuclei. 6, 2, p. 225-233Research output: Contribution to journal › Journal article › Research › peer-review
- Published
FBAR syndapin 1 recognizes and stabilizes highly curved tubular membranes in a concentration dependent manner
Ramesh, P., Farhangibarooji, Younes, Seyyed Reihani, S. N., Stamou, Dimitrios, Oddershede, L. B. & Bendix, Poul Martin, 31 Jan 2013, In: Scientific Reports. 3, p. 1565-(1-6)Research output: Contribution to journal › Journal article › Research › peer-review
- Published
EXCITATION OF THE DELTA-RESONANCE IN RELATIVISTIC HEAVY-ION CHARGE-EXCHANGE REACTIONS
ROYSTEPHAN, M., BACHELIER, D., BOYARD, J., CONTARDO, D., Ellegaard, Clive Sigurd, GAARDE, C., GROSSIORD, J., GUICHARD, A., HENNINO, T., JOURDAIN, J., LARSEN, J., PIZZI, J., RADVANYI, P. & TINSLEY, J., 6 Jan 1986, In: Nuclear Physics A: Nuclear and Hadronic Physics. 447, p. C635-C641Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DELTA-RESONANCE DECAY AND ABSORPTION IN NUCLEI
ROUSTEAU, S., HENNINO, T., RAMSTEIN, B., BOYARD, J., Ellegaard, Clive Sigurd, GAARDE, C., GOSSET, J., JOURDAIN, J., KAGARLIS, M., LARSEN, J., LEMAIRE, M., LHOTE, D., MORSCH, H., OSTERLUND, M., POITOU, J., RADVANYI, P., ROYSTEPHAN, M., SAMS, T. & ZUPRANSKI, P., 1 Nov 1993, In: Acta Physica Polonica B. 24, 10-11, p. 1747-1756Research output: Contribution to journal › Journal article › Research › peer-review
- Published
NUCLEAR-STRUCTURE STUDIES WITH PICK-UP REACTIONS ON EVEN TELLURIUM NUCLEI - THE TE-128(D,T)TE-127 AND THE TE-128(TAU,ALPHA)TE-127 REACTIONS
RODLAND, T., LIEN, J., LOVHOIDEN, G., VAAGEN, J., OYGAARD, V. & Ellegaard, Clive Sigurd, 2 Apr 1985, In: Physica Scripta. Topical Issues. 32, 3, p. 201-209Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical trapping reveals differences in dielectric and optical properties of copper nanoparticles compared to their oxides and ferrites
Purohit, P., Samadi, A., Bendix, Poul Martin, Laserna, J. J. & Oddershede, L. B., 27 Jan 2020, In: Scientific Reports. 10, 1, 10 p., 1198.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diffusion dynamics and characterization of attogram masses in optically trapped single nanoparticles using laser-induced plasma imaging
Purohit, P., Fortes, F. J. J. & Laserna, J., 22 Feb 2023, In: Nano Research. 16, p. 7470-7480 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Entropy production and coarse graining in Markov processes
Puglisi, A., Rondoni, L., Vulpiani, A. & Pigolotti, S., 20 May 2010, In: Journal of Statistical Mechanics: Theory and Experiment. 2010, p. P05015 26 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of gender in social network organization
Psylla, I., Sapiezynski, P., Mones, E. & Lehmann, S., 20 Dec 2017, In: PLOS ONE. 12, 12, e0189873.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of the mobility of liquid nano-inclusions of lead in crystalline aluminum with dislocations
Prokofjev, S., Zhilin, V., Johnson, Erik, Levinsen, Mogens & Dahmen, U., 2003, Proceedings of fifth International Conference. p. 487-496Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Precision-dissipation trade-off for driven stochastic systems
Proesmans, Karel Josef A, 24 Aug 2023, In: Communications Physics. 6, 1, 6 p., 226.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adhesion ability of angiotensin II with model membranes
Preu, J., Tiefenauer, L. & Gutberlet, T., 1 Feb 2017, In: B B A - Biomembranes. 1859, 2, p. 195-200Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Use of small angle neutron scattering to study the interaction of angiotensin II with model membranes
Preu, J., Jaeger, T., Garamus, V. M. & Gutberlet, T., 1 May 2011, In: European Biophysics Journal. 40, 5, p. 687-698Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Network formation of DMPG dispersions studied by light scattering, SANS, SAXS and calorimetry
Preu, J., Gutberiet, T. & Heimburg, Thomas Rainer, 2007, In: Chemistry and Physics of Lipids. Suppl. S, p. S40-S40Research output: Contribution to journal › Conference article › Research › peer-review
- Published
The role of Rydberg states in photoionization of NO2 and (NO+, O-) ion pair formation induced by one VUV photon
Poullian, S. M., Veyrinas, K., Billaud, P., Lebech, M., Picard, Y., Lucchese, R. R. & Dowek, D., 28 Jul 2013, In: Journal of Chemical Physics. 139, 4, 044311.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of leaf width and plan complexity on DMLC tracking of prostate intensity modulated arc therapy
Pommer, T., Falk, M., Poulsen, P. R., Keall, P. J., O'Brien, R. T. & Munck af Rosenschöld, P. M., 1 Nov 2013, In: Medical Physics. 40, 11, 111717.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dosimetric benefit of DMLC tracking for conventional and sub-volume boosted prostate intensity-modulated arc radiotherapy
Pommer, T., Falk, M., Poulsen, P. R., Keall, P. J., O'Brien, R. T., Petersen, P. M. & Munck af Rosenschöld, P. M., 7 Apr 2013, In: Physics in Medicine and Biology. 58, 7, p. 2349-2361Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Active matter in a viscoelastic environment
Plan, E. L. C. V. M., Yeomans, J. M. & Doostmohammadi, Amin, 24 Feb 2020, In: Physical Review Fluids. 5, 2, 15 p., 023102.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Activity pulses induce spontaneous flow reversals in viscoelastic environments
Plan, E. L. C. V. I. M., Yeomans, J. M. & Doostmohammadi, Amin, 14 Apr 2021, In: Interface Focus. 18, 177, 7 p., 20210100.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-sustained oscillations of active viscoelastic matter
Plan, E. L. C. V. I. M., Le Thi, H., Yeomans, J. M. & Doostmohammadi, Amin, 8 Jul 2022, In: Journal of Physics A: Mathematical and Theoretical. 55, 27, 11 p., 275601.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations
Ping, D., Wang, T., Fraebel, D. T., Maslov, S., Sneppen, Kim & Kuehn, S., 1 Aug 2020, In: ISME Journal. 14, 8, p. 2007-2018 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A specific assay for quantification of human C4c by use of an anti-C4c monoclonal antibody
Pilely, K., Skjødt, Mikkel-Ole, Nielsen, C., Andersen, T. E., Louise Aabom, A., Vitved, L., Koch, C., Skjødt, K. & Palarasah, Y., Mar 2014, In: Journal of Immunological Methods. 405, p. 87-96 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How Gaussian competition leads to lumpy or uniform species distributions
Pigolotti, S., Lopez, C., Hermandez-Garcia, E. & Andersen, K. H., 1 May 2011, In: Theoretical Ecology. 3, 2, p. 89-96 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Speciation-rate dependence in species-area relationships
Pigolotti, S. & Cencini, M., 7 Sep 2009, In: Journal of Theoretical Biology. 260, 1, p. 83-89 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population Genetics in Compressible Flows
Pigolotti, S., Benzi, R., Jensen, Mogens Høgh & Nelson, D. R., 23 Mar 2012, In: Physical Review Letters. 108, 12, p. 128102 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Symbolic dynamics of biological feedback networks
Pigolotti, S., Krishna, S. & Jensen, Mogens Høgh, 2009, In: Physical Review Letters. 102, 8, p. 088701Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oscillation patterns in negative feedback loops
Pigolotti, S., Krishna, S. & Jensen, Mogens Høgh, 2008, In: Proceedings of the National Academy of Science of the United States of America. 104, 16, p. 6533-6537Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bifractal nature of chromosome contact maps
Pigolotti, S., Jensen, Mogens Høgh, Zhan, Y. & Tiana, G., 15 Oct 2020, In: Physical Review Research. 2, 4, 9 p., 043078.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Growth, competition and cooperation in spatial population genetics
Pigolotti, S., Benzi, R., Perlekar, P., Jensen, Mogens Høgh, Toschi, F. & Nelson, D. R., 1 Mar 2013, In: Theoretical Population Biology. 84, p. 72-86Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Equilibrium Strategy and Population-Size Effects in Lowest Unique Bid Auctions
Pigolotti, S., Bernhardsson, P. J. S., Juul, J. S., Galster, G. & Vivo, P., 22 Feb 2012, In: Physical Review Letters. 108, 8, p. 088701 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Coexistence and invasibility in a two-species competition model with habitat-preference
Pigolotti, S. & Cencini, M., 21 Aug 2010, In: Journal of Theoretical Biology. 265, 4, p. 609-617 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Symbolic dynamics in genetic oscillation patterns: Chapter in " The Complexity of dynamical systems: a multidisciplinary perspective" p.99-118, eds. Johan Dubbeldam, Kirk Green, Daan Lanstra
Pigolotti, S., Krishna, S. & Jensen, Mogens Høgh, 2011, The Complexity of Dynamical systems: a multidisciplinary perspective. Wiley Publishing ed. USA: Wiley-VCH, p. 99-118 19 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Quality control system response to stochastic growth of amyloid fibrils
Pigolotti, S., Lizana, L., Sneppen, Kim & Otzen, D., 2 May 2013, In: F E B S Letters. 587, 9, p. 1405-1410 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Design process robustness: A bipartite network analysis reveals the central importance of people
Piccolo, S. A., Jørgensen, Sune Lehmann & Maier, A., 2018, In: Design Science. 4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using data-and network science to reveal iterations and phase-transitions in the design process
Piccolo, S., Jørgensen, Sune Lehmann & Maier, A., 2017, In: Proceedings of the International Conference on Engineering Design, ICED. 2, DS87-2, p. 11-20 10 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Two dimensional bias correction of temperature and precipitation copulas in climate models
Piani, C. & Härter, Jan Olaf Mirko, 16 Oct 2012, In: Geophysical Research Letters. 39, p. L20401Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Double-replica theory for evolution of genotype-phenotype interrelationship
Pham, Minh Tuan & Kaneko, Kunihiko, 21 Apr 2023, In: Physical Review Research. 5, 2, 13 p., 023049.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mesoscale simulation of biomembranes with FreeDTS
Pezeshkian, Weria & Ipsen, J. H., 16 Jan 2024, In: Nature Communications. 15, 1, 10 p., 548.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ekspertrapport af d. 23. oktober 2020: Incidens og fremskrivning af COVID-19 tilfælde
Petersen, Troels Christian & Heltberg, Mathias Spliid, 23 Oct 2020, Statens Seruminstitut. 25 p.Research output: Book/Report › Report › Research › peer-review
- Published
Ekspertrapport af den 10. december 2020: Effekten af kontaktopsporing
Petersen, Troels Christian & Heltberg, Mathias Spliid, 10 Dec 2020, Statens Seruminstitut. 28 p.Research output: Book/Report › Report › Research › peer-review
- Published
Notat om effekten af nedlukning frem til jul
Petersen, Troels Christian & Heltberg, Mathias Spliid, 6 Dec 2020, Statens Seruminstitut. 18 p.Research output: Book/Report › Report › Research › peer-review
- Published
Ekspertrapport af 20. september 2021: Scenarier for udviklingen i smitte, nyindlæggelser og gennembrudsinfektioner med covid-19
Petersen, Troels Christian & Heltberg, Mathias Spliid, 20 Sep 2021, Statens Seruminstitut. 58 p.Research output: Book/Report › Report › Research › peer-review
- Published
Ekspertrapport af den 15. januar 2021: Prognoser for smittetal med fokus på udviklingen i cluster B.1.1.7
Petersen, Troels Christian & Heltberg, Mathias Spliid, 15 Jan 2021, Statens Seruminstitut. 17 p.Research output: Book/Report › Report › Research › peer-review
- Published
Ekspertrapport af den 4. juni 2021: Prognoser for udviklingen af epidemien henover sommeren 2021
Petersen, Troels Christian & Heltberg, Mathias Spliid, 4 Jun 2021, Statens Seruminstitut. 22 p.Research output: Book/Report › Report › Research › peer-review
- Published
Notatet er opdateret d. 22. januar 2021 med en præcisering af formuleringer vedrørende udviklingen i forholdet mellem Cluster B.1.1.7 og øvrige virusvarianter: Scenarier for udviklingen i den engelske virusvariant af SARS-COV-2 (cluster B.1.1.7)
Petersen, Troels Christian & Heltberg, Mathias Spliid, 2 Jan 2021, Statens Seruminstitut. 9 p.Research output: Book/Report › Report › Research › peer-review
- Published
Ekspertrapport af den 21. februar 2021: Prognoser for smittetal og indlæggelser ved genåbningsscenarier d. 1. marts
Petersen, Troels Christian & Heltberg, Mathias Spliid, 21 Feb 2021, Statens Seruminstitut. 81 p.Research output: Book/Report › Report › Research › peer-review
- Published
Teknisk baggrundsrapport den 26. marts 2021
Petersen, Troels Christian & Heltberg, Mathias Spliid, 26 Mar 2021, Statens Seruminstitut. 63 p.Research output: Book/Report › Report › Research › peer-review
- Published
Thermodynamics of lipid multi-lamellar vesicles in presence of sterols at high hydrostatic pressure
Peters, J., Marion, J., Becher, F. J., Trapp, M., Gutberlet, T., Bicout, D. J. & Heimburg, Thomas Rainer, 10 Nov 2017, In: Scientific Reports. 7, 15339.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity
Perni, M., Galvagnion, C., Maltsev, A., Meisl, G., Müller, M. B. D., Challa, P. K., Kirkegaard, J. B., Flagmeier, P., Cohen, S. I. A., Cascella, R., Chen, S. W., Limbocker, R., Sormanni, P., Heller, G. T., Aprile, F. A., Cremades, N., Cecchi, C., Chiti, F., Nollen, E. A. A., Knowles, T. P. J. & 4 others, , 7 Feb 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 6, p. E1009-E1017Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechanical Signals in Nerves during Action Potential Propagation
Gonzalez-Perez, Alfredo & Heimburg, Thomas Rainer, 29 Jan 2013, In: Biophysical Journal. 104, 2, p. 78A-78AResearch output: Contribution to journal › Journal article › Research › peer-review
- Published
Polymersomes mimic biofilms fractal growth
Gonzalez-Perez, Alfredo, Feld, K. & Ruso, J. M., 1 Sep 2016, In: Journal of Polymer Research. 23, 9, 195.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Solitary electromechanical pulses in lobster neurons
Gonzalez-Perez, Alfredo, Mosgaard, L. D., Budvytyte, R., Villagran-Vargas, E., Jackson, Andrew D. & Heimburg, Thomas Rainer, Sep 2016, In: Biophysical Chemistry. 216, p. 51-59Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteins and Peptides in Biomimetic Polymeric Membranes
Gonzalez-Perez, Alfredo, 5 Mar 2013, Proteins in Solution and at Interface: Methods and Applications in Biotechnology and Materials Science. Ruso, J. M. & Piñeiro, A. (eds.). Hoboken, NJ, USA. : Wiley, p. 283-290 8 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Changes in self-assemblies induced by temperature, concentration and light
Gonzalez-Perez, Alfredo & Sanchez-Dominguez, M., 1 Jan 2013, In: Frontiers in bioscience (Scholar edition). 5, p. 611-630Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Versatile Approach towards the Compaction, Decompaction, and Immobilization of DNA at Interfaces by Using Cyclodextrins
Gonzalez-Perez, Alfredo & Ruso, J. M., 5 Aug 2013, In: ChemPhysChem. 14, 11, p. 2544-2553Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptional heterogeneity and cell cycle regulation as central determinants of Primitive Endoderm priming
Perera Pérez, Marta, Nissen, Silas Boye, Proks, Martin, Pozzi, S., S. Monteiro, Rita, Trusina, Ala & Brickman, Joshua Mark, 15 Aug 2022, In: eLife. 11, 23 p., e78967.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast Translation within the First 45 Codons Decreases mRNA Stability and Increases Premature Transcription Termination in E. coli
Pedersen, Steen, Terkelsen, Thilde Bagger, Eriksen, M., Hauge, M. K., Lund, C. C., Sneppen, Kim & Mitarai, Namiko, 2019, In: Journal of Molecular Biology. 431, 6, p. 1088-1097 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Role of MOR and the CI operator sites on the genetic switch temperate bacteriophage TP901-1
Pedersen, M. & Hammer, K., 9 Dec 2008, In: Journal of Molecular Biology. 384, 3, p. 577-589Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mutational analysis of two structural genes of the remperate lactococcal bacteriophage TP901-1 involved in tail length determination and baseplate assembly
Pedersen, M., Østergaard, S., Bresciani, J. & Vogensen, F. K., 25 Oct 2000, In: Virology. 276, 2, p. 315-328 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mutational analysis of the activator of late transcription, alt, in the lactococcal bacteriophage TP901-1
Pedersen, M. & Hammer, K., 27 Oct 2007, In: Archives of Virology. 152, 2, p. 305-320 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Repression of the lysogenic PR promoter in bacteriophage TP901-1 through binding of a CI-MOR complex to a composite OM-OR operator
Pedersen, M., Neergaard, J. T., Cassias, J., Rasmussen, K. K., Lo Leggio, Leila, Sneppen, Kim, Hammer, K. & Kilstrup, M., 26 May 2020, In: Scientific Reports. 10, 1, 13 p., 8659.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Pedersen, M., Nissen, S., Mitarai, Namiko, Svenningsen, Sine Lo, Sneppen, Kim & Pedersen, Steen, 2011, In: Journal of Molecular Biology. 407, 1, p. 35-44 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of Quaternary Structure and functional domains of the CI repressor from Bacteriophage TP901-1
Pedersen, M., Lo Leggio, Leila, Grossmann, J. G., Larsen, Sine & Hammer, K., 2008, In: Journal of Molecular Biology. 373, p. 983-996Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of the CI repressor protein encoded by the temperate lactococcal phage TP901-1
Pedersen, M., Ligowska, M. & Hammer, K., 15 Apr 2010, In: Journal of Bacteriology. 192, 8, p. 2102-2110 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dickkopf1 - a new player in modelling the wnt pathway
Pedersen, L., Krishna, S. & Jensen, Mogens Høgh, 12 Oct 2011, In: P L o S Computational Biology. 6, 10, p. e25550Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biological systems on a small scale
Pedersen, L., 2012, Center for Ice & Climate: Faculty of Science, University of Copenhagen. 184 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Three-dimensional optical control of individual quantum dots
Jauffred, Liselotte, Richardson, A. C. & Oddershede, L. B., 2008, In: Nano Letters. 8, 10, p. 3376-3380Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantum dots as handles for optical manipulation
Jauffred, Liselotte, Sletmoen, M., Czerwinski, F. & Oddershede, L. B., 27 Aug 2010, In: Proceedings of SPIE, the International Society for Optical Engineering. 7762Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Two-photon quantum dot excitation during optical trapping
Jauffred, Liselotte & Oddershede, L. B., 19 Apr 2010, In: Nano Letters. 10, 5, p. 1927-1930 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sub-diffraction positioning of a two-photon excited and optically trapped quantum dot
Jauffred, Liselotte, Kyrsting, A. H., Christensen, E. A., Seyyed Reihani, S. N. & Oddershede, L. B., 6 May 2014, In: Nanoscale. 6, 12, p. 6997-7003Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical Trapping of Gold Nanoparticles in Air
Jauffred, Liselotte, Taheri, S. M., Schmitt, R., Linke, H. & Oddershede, L. B., 1 Jul 2015, In: Nano Letters. 15, 7, p. 4713-4719Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Universality of rescaled curvature distributions
Pato, M., Schaadt, K., Tufaile, A., Ellegaard, Clive Sigurd, Nogueira, T. & Sartorelli, J., 1 Mar 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 71, 3, p. 037201Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bending of a lipid membrane edge by annexin A5 trimers
Pandey, M. P., Telles de Souza, P. C., Pezeshkian, Weria & Khandelia, H., 2024, In: Biophysical Journal. 123, 8, p. 1006-1014 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sodium polyanethole sulfonate as an inhibitor of activation of complement function in blood culture systems
Palarasah, Y., Skjødt, Mikkel-Ole, Vitved, L., Andersen, T. E., Skjoedt, K. & Koch, C., Mar 2010, In: Journal of Clinical Microbiology. 48, 3, p. 908-14 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasma proteome analysis of patients with type 1 diabetes with diabetic nephropathy
Overgaard, A. J., Hansen, H. G., Lajer, M., Pedersen, L., Tarnow, L., Rossing, Peter, McGuire, J. N. & Pociot, Flemming, 2010, In: Proteome Science. 8, p. 4 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Real-time particle tracking at 10,000 fps using optical fiber illumination
Otto, O., Czerwinski, F., Gornall, J. L., Stober, G., Oddershede, L. B., Seidel, R. & Keyser, U. F., 12 Oct 2010, In: Optics Express. 18, 22, p. 22722-22733 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-speed video-based tracking of optically trapped colloids
Otto, O., Gornall, J. L., Stober, G., Czerwinski, F., Siedel, R. & Keyser, U. F., 1 Apr 2011, In: Journal of Optics. 13, 4,SI, p. 044011Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Revealing Hidden Dynamics within Living Soft Matter
Ott, D., Bendix, Poul Martin & Oddershede, L. B., 11 Oct 2013, In: A C S Nano. 7, 10, p. 8333-8339Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A detection system for an optical manipulation system for manipulating micro-particls or nano-particles of a sample by means of at least two optical traps
Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 Dec 2014, Patent No. 70097, 1 Dec 2014Research output: Patent
- Published
Photodiode Based Detection for Multiple Trap Optical Tweezers
Ott, D., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 164 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Simultaneous three-dimensional tracking of individual signals from multi-trap optical tweezers using fast and accurate photodiode detection
Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 22 Sep 2014, In: Optics Express. 22, 19, p. 23661-23672Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enabling accurate photodiode detection of multiple optical traps by spatial filtering: Optical Trapping and Optical Micromanipulation XI
Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 16 Jun 2014, In: Proceedings of S P I E - International Society for Optical Engineering. 9164, p. 916411- 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Crosstalk elimination in the detection of dual-beam optical tweezers by spatial filtering
Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 May 2014, In: Review of Scientific Instruments. 85, 5, 053108.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A high-pressure study of thallium
Olsen, J. S., Gerward, L., Steenstrup, S. & Johnson, E., 1994, In: Journal of Applied Crystallography. 27, p. 1002-1005Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High Pressure Studies up to 50 GPa of Bi-based High-Tc Superconductors
Olsen, J. S., Steenstrup, S., Gerward, L. & Sundquist, B., 1991, In: Physica Scripta. 44, p. 211-3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lipid membrane domain formation and alamethicin aggregation studied by calorimetry, sound velocity measurements, and atomic force microscopy
Oliynyk, V., Jäger, M., Heimburg, Thomas Rainer, Buckin, V. & Kaatze, U., 2008, In: Biophysical Chemistry. 134, 3, p. 168-177 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Different reprogramming propensities in plants and mammals: Are small variations in the core network wirings responsible?
Olariu, V., Nilsson, J., Jonsson, H. & Peterson, C., 6 Apr 2017, In: PLOS ONE. 12, 4, e0175251.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nanog, Oct4 and Tet1 interplay in establishing pluripotency
Olariu, V., Lövkvist, Cecilia & Sneppen, Kim, 5 May 2016, In: Scientific Reports. 6, 25438.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A deterministic method for estimating free energy genetic network landscapes with applications to cell commitment and reprogramming paths
Olariu, V., Manesso, E. & Peterson, C., 7 Jun 2017, In: Royal Society Open Science. 4, 6, 160765.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Heterosis of fitness and phenotypic variance in the evolution of a diploid gene regulatory network
Okubo, K., Kaneko, Kunihiko & Nelson, K. E. (ed.), 29 Jul 2022, In: PNAS Nexus. 1, 3, 12 p., 097.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comprehensive analysis of gene regulatory dynamics, fitness landscape, and population evolution during sexual reproduction
Okubo, K. & Kaneko, Kunihiko, 14 Oct 2022, In: New Journal of Physics. 24, 10, 13 p., 103017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Jamming Transition in Kinetically Constrained Models with Reflection Symmetry
Ohta, H. & sasa, S., 1 Jun 2014, In: Journal of Statistical Physics. 155, 5, p. 827-842Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Force probing of individual molecules inside the living cell is now a reality
Oddershede, L. B., 17 Oct 2012, In: Nature Chemical Biology. 8, 11, p. 879-886 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Small-scale nonequilibrium systems
Oddershede, L. B. & Møller, P. C. F., 2011, Handbook of Nanophysics: Principles and methods. CPC Press ed. Taylor & Francis, Vol. chapter 7. p. 7-1- 7-16Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Foton - et fysikspil
Oddershede, L. B., Jacobsen, R. H., Lefmann, Kim & Thoft, N. B., 1 Mar 1994, In: Kvant. 4, p. 9-18Research output: Contribution to journal › Journal article › Communication
- Published
Institute Colloquium
Oddershede, L. B., 16 Feb 2010, USAResearch output: Other contribution › Research
- Published
Institute Colloquium
Oddershede, L. B., 15 Jun 2010, Dep. of ChemistryResearch output: Other contribution › Research
- Published
Photon 10
Oddershede, L. B., 25 Aug 2010, Southampton University, GB. : American Institute of Physics.Research output: Other contribution › Research
- Published
Complex and non-equlibrium physics: at Nordic workshop on statistical physics , biology
Oddershede, L. B., 18 Mar 2010, Stockholm, SverigeResearch output: Other contribution › Research
- Published
Institute Colloquium
Oddershede, L. B., 15 Jan 2010, EnglandResearch output: Other contribution › Research
- Published
Optical manipulation of hot nanoparticles can mediate selected cell fusion
Oddershede, L. B., Bahadori, Azra & Bendix, Poul Martin, 18 Apr 2017, In: Proceedings of SPIE. 10252, 1025207.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical tweezers techniques, chapter in Hanndbook of Molecular Biophysics: Methods and Applications
Oddershede, L. B., 2009, Handbook of Molecular Biophysics. G. Bohr, H. (ed.). Wiley-VCH, p. 195-214 19 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
- Published
Optical tweezers techniques
Oddershede, L. B., 2008, Handbook of Molecular Biophysics: Methods and Applications. Bohr, H. G. (ed.). 1. ed. ed. Berlin: Wiley-VCH, Vol. Chapter 6. p. Chapter 6Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Genome maintanace and consequences
Oddershede, L. B., 5 Jun 2010, Dragør, DK.Research output: Other contribution › Research
- Published
N7 nanooptics
Oddershede, L. B., 5 Sep 2010, Fuglesøcentert, Ebeltoft, DK.Research output: Other contribution › Research
- Published
The Motion of a Single Molecule, the Lambda-Receptor, in the Bacterial Outer Membrane
Oddershede, L., Dreyer, J. K., Grego, S., Brown, Stanley & Berg-Sørensen, K., 2002, In: Biophysical Journal. 83, 6, p. 3152-61 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Autotoxin-mediated latecomer killing in yeast communities
Oda, A. H., Tamura, M., Kaneko, Kunihiko, Ohta, K. & Hatakeyama, T. S., 7 Nov 2022, In: PLOS Biology. 20, 11, 23 p., 3001844.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleation and spreading of a heterochromatic domain in fission yeast
Obersriebnig, M. J., Pallesen, E. M. H., Sneppen, Kim, Trusina, Ala & Thon, Genevieve, 2016, In: Nature Communications. 7, 11 p., 11518.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physics Based Investigations of DNA Supercoiling and of Plasmonic Nanoparticles for Photothermal Cancer Therapy
Nørregaard, K., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 151 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Using Optically Manipulated Metallic Nanoparticles for Cancer Treatment
Nørregaard, K., Jørgensen, Jesper Tranekjær, Kjær, Andreas, Samadi, A., Bendix, Poul Martin & Oddershede, L. B., 2 Apr 2017, Optical Trapping Applications 2017: Optical Manipulation Applications III (OtTu2E). San Diego, California, USA: Optical Society of America, OtTuE.4Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Optical manipulation of single molecules in the living cell
Nørregaard, K., Jauffred, Liselotte, Berg-Sørensen, K. & Oddershede, L. B., 10 Mar 2014, In: Physical Chemistry Chemical Physics. 16, 25, p. 12614-12624Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of the Photothermal Efficiency of Different Types of Plasmonic Nanoparticles in vitro and in vivo
Nørregaard, K., Jørgensen, Jesper Tranekjær, Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 171aResearch output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal model of cellular mechanotransduction via Rho and YAP
Novev, Yavor Kirilov, Heltberg, Mathias Spliid, Jensen, Mogens Høgh & Doostmohammadi, Amin, 17 Aug 2021, In: Integrative Biology. 13, 8, p. 197-209 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mesoscale modelling of polymer aggregate digestion
Novev, Yavor Kirilov, Doostmohammadi, Amin, Zöttl, A. & Yeomans, J. M., 1 Nov 2020, In: Current Research in Food Science. 3, p. 122-133 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell tracking reveals super-spreading brain cancer cells with high persistence
Nousi, A., Sogaard, M. T., Audion, M. & Jauffred, Liselotte, 1 Dec 2021, In: Biochemistry and Biophysics Reports. 28, 12 p., 101120.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tethered particle analysis of supercoiled circular DNA using peptide nucleic acid handles
Norregaard, K., Andersson, M., Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., Sep 2014, In: Nature Protocols (Print). 9, 9, p. 2206-23 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Manipulation and Motion of Organelles and Single Molecules in Living Cells
Norregaard, K., Metzler, R., Ritter, C. M., Berg-Sørensen, K. & Oddershede, L. B., 3 Feb 2017, In: Chemical Reviews. 117, 5, p. 4342-4375Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of supercoiling on the λ switch
Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 1 Jan 2014, In: Bacteriophage. 4, 2, p. 1-5 5 p., e27517.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
18F-FDG PET/CT-based early treatment response evaluation of nanoparticle-assisted photothermal cancer therapy
Norregaard, K., Jørgensen, Jesper Tranekjær, Simon, M., Melander, F., Kristensen, L. K., Bendix, Poul Martin, Andresen, T. L., Oddershede, L. B. & Kjær, Andreas, 24 May 2017, In: PLOS ONE. 12, 5, e0177997.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inferring mechanical properties of the SARS-CoV-2 virus particle with nano-indentation tests and numerical simulations
Nonn, A., Kiss, B., Pezeshkian, Weria, Tancogne-Dejean, T., Cerrone, A., Kellermayer, M., Bai, Y., Li, W. & Wierzbicki, T., 8 Oct 2023, In: Journal of the Mechanical Behavior of Biomedical Materials. 148, 15 p., 106153.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Missing levels in acoustic resonators
Noguetira, T. N., Sartorelli, J. C., Pato, M. P. & Ellegaard, Clive Sigurd, 1 Nov 2008, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 78, 5, part 2, 055201.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Publication bias and the canonization of false facts
Nissen, Silas Boye, Magidson, T., Gross, K. & Bergstrom, C. T., 20 Dec 2016, In: eLife. 5, p. 1-19 19 p., e21451.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theoretical tool bridging cell polarities with development of robust morphologies
Nissen, Silas Boye, Rønhild, S., Trusina, Ala & Sneppen, Kim, 27 Nov 2018, In: eLife. 7, 25 p., e38407.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four simple rules that are sufficient to generate the mammalian blastocyst
Nissen, Silas Boye, Perera Pérez, Marta, Martin Gonzalez, Javier, Morgani, S. M. C., Jensen, Mogens Høgh, Sneppen, Kim, Brickman, Joshua Mark & Trusina, Ala, 12 Jul 2017, In: PLOS Biology. 15, 7, p. 1-30 e2000737.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Point Particles to Capture Polarized Embryonic Cells & Cold Pools in the Atmosphere
Nissen, Silas Boye, 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 319 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Circling in on Convective Self-Aggregation
Nissen, Silas Boye & Härter, Jan Olaf Mirko, 24 Sep 2021, In: Journal of Geophysical Research: Atmospheres. 126, 20, 12 p., e2021JD035331.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Head-to-Head Comparison of the Penetration Efficiency of Lipid-Based Nanoparticles into Tumor Spheroids
Niora, M., Pedersbaek, D., Munter, R., Weywadt, M. F. D. V., Farhangibarooji, Younes, Andresen, T. L., Simonsen, J. B. & Jauffred, Liselotte, 25 Aug 2020, In: ACS Omega. 5, 33, p. 21162-21171 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Wildtype and A30P mutant alpha-synuclein form different fibril structures
Nielsen, S. B., Macchi, F., Raccosta , S., Langkilde, Annette Eva, Giehm, L., Kyrsting, A. H., Svane, A. S. P., Manno, M., Christiansen, G., Nielsen, N. C., Oddershede, L. B., Vestergaard, Bente & Otzen, D., 2013, In: PLOS ONE. 8, 7, e67713.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple Roles of Heparin in the Aggregation of p25 alpha
Nielsen, S. B., Yde, Pernille, Giehm, L., Sundbye, S., Christiansen, G., Mathiesen, Joachim, Jensen, Mogens Høgh, Jensen, P. H. & Otzen, D. E., 2012, In: Journal of Molecular Biology. 421, 4-5, Part 2, p. 601-615Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Gompertz Law emerges naturally from the inter-dependencies between sub-components in complex organisms
Yde, Pernille, Jensen, Majken Karoline, Mitarai, Namiko & Bhatt, Samir, 2024, In: Scientific Reports. 14, 1, 11 p., 1196.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Brownian Warps for Non-Rigid Registration
Nielsen, Mads, Johansen, P., Jackson, Andrew D., Lautrup, B. E. & Hauberg, S., 2008, In: Journal of Mathematical Imaging and Vision. 31, 2-3, p. 221-231 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
MR-based CT metal artifact reduction for head-and-neck photon, electron, and proton radiotherapy
Nielsen, J. S., Van Leemput, K. & Edmund, J. M., Oct 2019, In: Medical Physics. 46, 10, p. 4314-4323Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The counterintuitive implications of superspreading diseases
Nielsen, B. F., Sneppen, Kim & Simonsen, L., 31 Oct 2023, In: Nature Communications. 14, 1, 3 p., 6954.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Substrate curvature governs texture orientation in thin films of smectic block copolymers
Nielsen, Bjarke Frost, Linga, G., Christensen, A. & Mathiesen, Joachim, 14 Apr 2020, In: Soft Matter. 16, 14, p. 3395-3406Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-organizing systems and disease modelling: From Molecules to Populations
Nielsen, Bjarke Frost, 2021, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 206 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Differences in social activity increase efficiency of contact tracing
Nielsen, Bjarke Frost, Sneppen, Kim, Simonsen, L. & Mathiesen, Joachim, 2 Oct 2021, In: European Physical Journal B. 94, 10, 11 p., 209.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Model to Link Cell Shape and Polarity with Organogenesis
Nielsen, Bjarke Frost, Nissen, Silas Boye, Sneppen, Kim, Mathiesen, Joachim & Trusina, Ala, 10 Jan 2020, In: iScience. 23, 2, p. 1-10 10 p., 100830.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lockdowns exert selection pressure on overdispersion of SARS-CoV-2 variants
Nielsen, Bjarke Frost, Eilersen, Andreas Thomas, Simonsen, L. & Sneppen, Kim, 2 Sep 2022, In: Epidemics. 40, 7 p., 100613.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
COVID-19 superspreading suggests mitigation by social network modulation
Nielsen, Bjarke Frost, Simonsen, L. & Sneppen, Kim, 15 Mar 2021, In: Physical Review Letters. 126, 6 p., 118301.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2
Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Schelling model of cell segregation based only on local information
Nielsen, Alexander Valentin, Gade, A. L., Juul, J. & Strandkvist, C., 4 Nov 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 5, 052705.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational tools for identifying and relating cell-types in development and stem-cell engineering
Nielsen, Alexander Valentin, 2022, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 154 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Self-organized quantization and oscillations on continuous fixed-energy sandpiles
Niehues, J., Jensen, Gorm Gruner & Härter, Jan Olaf Mirko, 31 Mar 2022, In: Physical Review E. 105, 3, 13 p., 034314.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Resonant energy transfer in Bose-Einstien condensates
Nicolin, A., Jensen, Mogens Høgh, Thomsen, Jan Westenkær & Carretero-Gonxález, R., 2008, In: Physica D : Non-linear Phenomena. 237, 19, p. 2476-2481Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mode locking of a driven Bose-Einstein condensate
Nicolin, A., Carretero-González, R. & Jensen, Mogens Høgh, 2008, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 75, 3, p. 036208Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Establishment of heterochromatin in domain-size-dependent bursts
Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The transcription factor Atf1 lowers the transition barrier for nucleosome-mediated establishment of heterochromatin
Nickels, Jan Fabio, Della-Rosa, M. E., Miguelez Goyeneche, I., Charlton, Sebastian Jespersen, Sneppen, Kim & Thon, Genevieve, 2022, In: Cell Reports. 39, 7, 17 p., 110828.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Memory effects, arches and polar defect ordering at the cross-over from wet to dry active nematics
Nejad, M. R., Doostmohammadi, Amin & Yeomans, J. M., 7 Mar 2021, In: Soft Matter. 17, 9, p. 2500-2511 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fluid dynamics of dilatant fluid
Nakanishi, H., Nagahiro, S. & Mitarai, Namiko, 12 Jan 2012, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 85, 1, p. 011401 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Shear Thickening Oscillation in a Dilatant Fluid
Nakanishi, H. & Mitarai, Namiko, 25 Feb 2011, In: Journal of the Physical Society of Japan. 80, 3, p. 033801Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamical analysis on gene activity in the presence of repressors and an interfering promoter
Nakanishi, H., Mitarai, Namiko & Sneppen, Kim, 1 Nov 2008, In: Biophysical Journal. 95, 9, p. 4228-4240Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Heparin promotes fibrillation of most phenol-soluble modulin virulence peptides from Staphylococcus aureus
Najarzadeh, Z., Zaman, M., Sereikaité, Vita, Strømgaard, Kristian, Andreasen, M. & Otzen, D. E., 2021, In: Journal of Biological Chemistry. 297, 2, 14 p., 100953.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Experimental observation of shear thickening oscillation
Nagahiro, S., Nakanishi, H. & Mitarai, Namiko, 1 Oct 2013, In: EPL. 104, 2, 28002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phone-based metric as a predictor for basic personality traits
Mønsted, B., Mollgaard, A. & Mathiesen, Joachim, 1 Jun 2018, In: Journal of Research in Personality. 74, p. 16-22Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mathematical models of human behavior
Møllgaard, A. E., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Measure of node similarity in multilayer networks
Møllgaard, A. E., Zettler, Ingo, Dammeyer, Jesper, Jensen, Mogens Høgh, Lehmann, S. & Mathiesen, Joachim, 14 Jun 2016, In: PLOS ONE. 11, 6, 0157436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complex Langevin dynamics for chiral random matrix theory
Møllgaard, A. E. & Splittorff, Kim, 9 Dec 2013, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). 88, 11, 12 p., 116007.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emergent user behavior on Twitter modelled by a stochastic differential equation
Møllgaard, A. E. & Mathiesen, Joachim, 2015, In: P L o S One. 10, 5, e0123876.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oxidative stress and inflammation generated DNA damage by exposure to air pollution particles
Møller, Peter, Danielsen, P. H., Karottki, D. G., Jantzen, K., Roursgaard, Martin, Klingberg, H., Jensen, Ditte Marie, Christophersen, D. V., Hemmingsen, J. G., Cao, Y. & Loft, Steffen, 2014, In: Mutation Research - Reviews. 762, p. 133-166 34 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Quantification of droplet deformation by electromagnetic trapping
Møller, P. C. F. & Oddershede, L. B., 2009, In: EPL. 88, p. 48005 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reduction of Cheddar cheese ripening time through the addition of glucose
Møller, C. O. D. A., Czárán, T. L., Christensen, B. B., Siegumfeldt, Henrik & Rattray, F. P., 2016.Research output: Contribution to conference › Poster › Research
- Published
Melting transitions in biomembranes
Muzic, T., Tounsi, F., Madsen, S. B., Pollakowski, D., Konrad, M. & Heimburg, Thomas Rainer, 26 Sep 2019, In: B B A - Biomembranes. 1861, 11, 11 p., 183026.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling positioning uncertainties of prostate cancer external beam radiation therapy using pre-treatment data
Munck af Rosenschöld, P. M., Desai, N. B., Hun, J., Apte, A., Hunt, M., Kalikstein, A., Mechalakos, J., Happersett, L., Deasy, J. O. & Zelefsky, M. J., 1 Feb 2014, In: Radiotherapy & Oncology. 110, 2, p. 251-255Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spontaneous Aggregation of Convective Storms
Muller, C., Yang, D., Craig, G., Cronin, T., Fildier, B., Härter, Jan Olaf Mirko, Hohenegger, C., Mapes, B., Randall, D., Shamekh, S. & Sherwood, S. C., 2021, In: Annual Review of Fluid Mechanics. 54, p. 133-157 25 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Low frequency sound propagation in lipid memembranes
Mosgaard, L. D., Heimburg, Thomas Rainer & Jackson, Andrew D., 2012, Advances in Planar Lipid Bilayers and Liposomes. Elsevier, Vol. 16. p. 51-74 24 p. (Advances in Planar Lipid Bilayers and Liposomes).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
The Electrical and Dynamical Properties of Biomembranes
Mosgaard, L. D., 2014, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 190 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Fluctuations of systems in finite heat reservoirs with applications to phase transitions in lipid membranes
Mosgaard, L. D., Jackson, Andrew D. & Heimburg, Thomas Rainer, 25 Sep 2013, In: Journal of Chemical Physics. 139, 12, 125101.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lipid Ion Channels and the Role of Proteins
Mosgaard, L. D. & Heimburg, Thomas Rainer, 31 Jul 2013, In: Accounts of Chemical Research. 46, 12, p. 2966-2976Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechano-capacitive properties of polarized membranes
Mosgaard, L. D., Zecchi, K. A. & Heimburg, Thomas Rainer, 21 Aug 2015, In: Soft Matter. 11, 40, p. 7899-7910Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Effect of the Nonlinearity of the Response of Lipid Membranes to Voltage Perturbations on the Interpretation of Their Electrical Properties. A New Theoretical Description
Mosgaard, L. D., Zecchi, K. A., Heimburg, Thomas Rainer & Budvytyte, R., Dec 2015, In: Membranes. 5, 4, p. 495-512Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-Molecule Study of Thermomyces lanuginosus Lipase in a Detergency Application System Reveals Diffusion Pattern Remodeling by Surfactants and Calcium
Moses, M. E., Lund, P. M., Bohr, S. S., Iversen, J. F., Kæstel-Hansen, J., Kallenbach, A. S., Iversen, L., Christensen, S. M. & Hatzakis, Nikos, 2021, In: A C S Applied Materials and Interfaces. 13, 28, 9 p., 33704.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Statistical Model for Isolated Convective Precipitation Events
Moseley, C., Henneberg, O. & Härter, Jan Olaf Mirko, 29 Jan 2019, In: Journal of Advances in Modeling Earth Systems. 11, 1, p. 360-375Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Probing the precipitation life cycle by iterative rain cell tracking
Moseley, C., Berg, P. & Härter, Jan Olaf Mirko, 27 Dec 2013, In: Journal of Geophysical Research: Atmospheres. 118, 24, p. 13361-13370Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intensification of convective extremes driven by cloud–cloud interaction
Moseley, C., Hohenegger, C., Berg, P. & Härter, Jan Olaf Mirko, 29 Aug 2016, In: Nature Geoscience. 9, 10, p. 748-752Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of local thermoplasmonic heating on biological membranes
Moreno Pescador, Guillermo Sergio, Qoqaj, I., Thusgaard Ruhoff, Victoria, Iversen, J., Nylandsted, J. & Bendix, Poul Martin, 9 Sep 2019, In: Proceedings of S P I E - International Society for Optical Engineering. 11083, 19 p., 110830M.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Thermoplasmonic nano-rupture of cells reveals Annexin V function in plasma membrane repair
Moreno Pescador, Guillermo Sergio, Aswad, D. S., Florentsen, C. D., Bahadori, Azra, Arastoo, M. R., Danielsen, Helena Maria Dávidsdóttir, Heitmann, A. S. B., Boye, T. L., Nylandsted, J., Oddershede, L. B. & Bendix, Poul Martin, 2022, In: Nanoscale. 14, p. 7778–7787Research output: Contribution to journal › Journal article › Research
- Published
Curvature- and Phase-Induced Protein Sorting Quantified in Transfected Cell-Derived Giant Vesicles
Moreno Pescador, Guillermo Sergio, Florentsen, C. D., Østbye, H., Sønder, S. L., Boye, T. L., Veje, E. L., Sonne, A. K., Semsey, S., Nylandsted, J., Daniels, R. & Bendix, Poul Martin, Jun 2019, In: ACS Nano. 13, 6, p. 6689-6701Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification of protein dynamics in nanotubes pulled from transfected cell-derived vesicles
Moreno Pescador, Guillermo Sergio, Florentsen, C., Østbye, H., Sønder, S. L., Boye, T. L., Veje, E. L., Semsey, S., Nylandsted, J., Daniels, R. & Bendix, Poul Martin, 20 Jul 2019, In: European Biophysics Journal. 48, Suppl. 1, p. S159-S159Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Investigating Plasma-Membrane Repair Employing Thermoplasmonics
Moreno Pescador, Guillermo Sergio, Aswad, D. S., Arastoo, Mohammadreza, Danielsen, Helena Maria Dávidsdóttir, Florentsen, C. D., Bahadori, Azra, Nylandsted, J., Oddershede, L. B. & Bendix, Poul Martin, 2021, In: Biophysical Journal. 120, 3, Supp. 1, p. 45a-45a 1 p., 221-Pos.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Membrane protein dynamics studied with optical and thermoplasmonic methods in complex and simple membranes
Moreno Pescador, Guillermo Sergio, 2019, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 163 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Lateral Distribution and Mobility of Transmembrane Proteins in Plasma Membrane Vesicles
Moreno Pescador, Guillermo Sergio, Otsbye, H., Semsey, S., Veje, E. L., Daniels, R. & Bendix, Poul Martin, 18 Feb 2018, In: Biophysical Journal. 114, 3, Supp. 2976-pos, p. 600A-600A 1 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Thermoplasmonic Vesicle Fusion Reveals Membrane Phase Segregation of Influenza Spike Proteins
Moreno Pescador, Guillermo Sergio, Arastoo, Mohammadreza, Thusgaard Ruhoff, Victoria, Chiantia, S., Daniels, R. & Bendix, Poul Martin, 11 Apr 2023, In: Nano Letters. 23, 8, p. 3377-3384 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disparate metabolic response to fructose feeding between different mouse strains
Montgomery, M. K., Fiveash, C. E., Braude, J. P., Osborne, Brenna, Brown, Stanley, Mitchell, T. W. & Turner, N., 22 Dec 2015, In: Scientific Reports. 5, 18474.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechanics of Live Cell Elimination
Monfared, S., Ravichandran, G., Andrade, J. E. & Doostmohammadi, Amin, 18 Aug 2021, In: bioRxiv. p. 1-7 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechanical basis and topological routes to cell elimination
Monfared, S., Ravichandran, G., Andrade, J. & Doostmohammadi, Amin, 18 Apr 2023, In: eLife. 12, 20 p., 82435.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Short-range correlation of stress chains near solid-to-liquid transition in active monolayers
Khosh Sokhan Monfared, Siavash, Ravichandran, G., Andrade, J. E. & Doostmohammadi, Amin, 8 May 2024, In: Journal of the Royal Society Interface. 21, 214, 8 p., 20240022.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contact activity and dynamics of the social core
Mones, E., Stopczynski, A. & Lehmann, S., 31 May 2017, In: EPJ Data Science. 6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optimizing targeted vaccination across cyber-physical networks: an empirically based mathematical simulation study
Mones, E., Stopczynski, A., Pentland, A. '., Hupert, N. & Lehmann, S., 1 Jan 2018, In: Journal of the Royal Society. Interface. 15, 138, 9 p., 20170783.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Correlations between human mobility and social interaction reveal general activity patterns
Mollgaard, A., Lehmann, S. & Mathiesen, Joachim, 13 Dec 2017, In: PLOS ONE. 12, 12, e018973.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Dynamics of Initiative in Communication Networks
Mollgaard, A. & Mathiesen, Joachim, 28 Apr 2016, In: PLOS ONE. 11, 4, e0154442.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Full simulation of chiral random matrix theory at nonzero chemical potential by complex Langevin
Mollgaard, A. & Splittorff, Kim, 26 Feb 2015, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). 91, 3, 036007.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Velocity correlations in dense granular shear flows: Effects on energy dissipation and normal stress
Mitarai, Namiko & Nakanishi, H., 2007, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 75, 3, p. 031305Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hard-sphere limit of soft-sphere model for granular materials: Stiffness dependence of steady granular flow
Mitarai, Namiko & Nakanishi, H., 19 Feb 2003, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 67, 2, 021301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Linear stability analysis of rapid granular flow down a slope and density wave formation
Mitarai, Namiko & Nakanishi, H., 25 May 2004, In: Journal of Fluid Mechanics. 507, p. 309-334Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Collisional granular flow as a micropolar fluid
Mitarai, Namiko, Hayakawa, H. & Nakanishi, H., 29 Apr 2002, In: Physical Review Letters. 88, 17, 174301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Entrainment of noise-induced and limit cycle oscillators under weak noise
Mitarai, Namiko, Alon, U. & Jensen, Mogens Høgh, 1 Jun 2013, In: Chaos. 23, 2, 023125.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Wet granular materials
Mitarai, Namiko & Nori, F., 30 Jun 2006, In: Advances in Physics. 55, 1-2, p. 1-45 45 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Instability of dilute granular flows on rough slope
Mitarai, Namiko & Nakanishi, H., 1 Oct 2001, In: Journal of the Physical Society of Japan. 70, 10, p. 2809-2812Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How pirate phage interferes with helper phage: Comparison of the two distinct strategies
Mitarai, Namiko, 7 Feb 2020, In: Journal of Theoretical Biology. 486, 9 p., 110096.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Control of ribosome traffic by position-dependent choice of synonymous codons
Mitarai, Namiko & Pedersen, Steen, 8 Oct 2013, In: Physical Biology. 10, 5, 056011.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three is much more than two in coarsening dynamics of cyclic competitions
Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emergence of diversity in a model ecosystem
Mitarai, Namiko, Mathiesen, Joachim & Sneppen, Kim, 30 Jul 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 86, 1, p. 011929 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal structure of traffic flow in a system with an open boundary
Mitarai, Namiko & Nakanishi, H., 21 Aug 2000, In: Physical Review Letters. 85, 8, p. 1766-1769Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustainable diversity of phage-bacteria systems
Mitarai, Namiko, Marantos, Anastasios & Sneppen, Kim, 1 Jun 2023, In: Current Opinion in Systems Biology. 35, 6 p., 100468.Research output: Contribution to journal › Review › Research › peer-review
- Published
Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage lambda and Escherichia coli
Mitarai, Namiko, Brown, Stanley & Sneppen, Kim, 11 Apr 2016, In: Journal of Bacteriology. 198, 12, p. 1783-1793Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Efficient degradation and expression prioritization with small RANs
Mitarai, Namiko, Andersson, A. M. C., Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Physical Biology. 4, 3, p. 164-171Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Convective instability and structure formation in traffic flow
Mitarai, Namiko & Nakanishi, H., 2 Nov 2000, In: Journal of the Physical Society of Japan. 69, 11, p. 3752-3761Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Speciation, diversification, and coexistence of sessile species that compete for space
Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability analysis of collisional granular flow on a slope
Mitarai, Namiko & Nakanishi, H., 30 Sep 2003, In: International Journal of Modern Physics B. 17, 22-24 II, p. 4290-4294 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ribosome collisions and Translation efficiency: Optimization by codon usage and mRNA destabilization
Mitarai, Namiko, Sneppen, Kim & Pedersen, Steen, 2008, In: Journal of Molecular Biology. 382, 1, p. 236-245 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity
Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bagnold scaling, density plateau, and kinetic theory analysis of dense granular flow
Mitarai, Namiko & Nakanishi, H., 1 Apr 2005, In: Physical Review Letters. 94, 12, p. 128001 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The generation of promoter-mediated transcriptional noise in bacteria
Mitarai, Namiko, Dodd, I. B., Crooks, M. T. & Sneppen, Kim, 11 Jul 2008, In: PLoS Computational Biology. 4, 7, p. e 10000109Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability analysis of optimal velocity model for traffic and granular flow under open boundary condition
Mitarai, Namiko & Nakanishi, H., 1 Aug 1999, In: Journal of the Physical Society of Japan. 68, 8, p. 2475-2478Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies
Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Granular flow: dry and wet
Mitarai, Namiko & Nakanishi, H., 2012, In: European Physical Journal. Special Topics. 204, 1, p. 5-17 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Simple Interaction Model for Particlly Wet Granular Materials
Mitarai, Namiko & Nakanishi, H., 1 Feb 2010, In: A I P Conference Proceedings Series. 1227, p. 214-220Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Simple model for wet granular materials with liquid cluster
Mitarai, Namiko & Nakanishi, H., 1 Dec 2009, In: EPL. 88, 6, p. 64001Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiphase flow of immiscible fluids on unstructured moving meshes
Misztal, M. K., Erleben, Kenny, Bargteil, A., Fursund, J., Christensen, B. B., Bærentzen, J. A. & Bridson, R., 2014, In: I E E E Transactions on Visualization and Computer Graphics. 20, 1, p. 4-16 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simulating anomalous dispersion in porous media using the unstructured lattice Boltzmann method
Misztal, M. K., Hernandez Garcia, A., Matin, R., Müter, D., Jha, D., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Frontiers in Physics. 3, 9 p., 50.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Permeability and Fluid Flow: Presentation at the Phoenix Consortium’s Symposium on Imaging Porous Media and Fluid Flow,
Misztal, M. K. & Mathiesen, Joachim, 10 Jan 2015, Copenhagen, DenmarkResearch output: Other contribution › Research
- Published
Two-phase Flow Simulations Using the Lattice Boltzmann Method on Unstructured Grids.
Misztal, M. K., Matin, R., Hernandez, A. & Mathiesen, Joachim, 1 Jul 2015, 224th International Conference on Discrete Simulation of Fluid Dynamics, 13th-17th July. The Royal Society of Edinburgh ed. EdinburghResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Detailed analysis of the lattice Boltzmann method on unstructured grids
Misztal, M. K., Hernandez Garcia, A., Matin, R., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Journal of Computational Physics. 297, p. 316-339Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evaluation of the Unstructured Lattice Boltzmann Method in Porous Flow Simulations
Misztal, M. K., Matin, R., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Critical behavior of polystyrene-cyclohexane
Mirzaev, S., Kaatze, U. & Heimburg, Thomas Rainer, 7 Dec 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 82, 6, part 1, p. 061502 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interference of mesoscales in the critical behaviour of polystyrene-cyclohexane: heat capacity and mass density
Mirzaev, S. Z., Heimburg, Thomas Rainer & Kaatze, U., 7 Dec 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 82, 6, p. 061502 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Nature Exposure is Associated With Reduced Smartphone Use
Minor, Kelton Ray, Glavind, Kristoffer Lind, Schwartz, A. J., Danforth, C. M., Lehmann, S. & Bjerre-Nielsen, Andreas, 27 Apr 2023, (E-pub ahead of print) In: Environment and Behavior.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-organization of structures and networks from merging and small-scale fluctuations
Minnhagen, P., Rosvall, M., Sneppen, Kim & Trusina, Ala, 15 Sep 2004, In: Physica A: Statistical Mechanics and its Applications. 340, 4, p. 725-732Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Machine-learning vs. logistic regression for preoperative prediction of medical morbidity after fast-track hip and knee arthroplasty—a comparative study
Michelsen, C., Jørgensen, C. C., Heltberg, Mathias Spliid, Jensen, Mogens Høgh, Lucchetti, Alessandra, Petersen, P. B., Petersen, T., Kehlet, Henrik, Madsen, F., Hansen, T. B., Gromov, Kirill, Jakobsen, T., Varnum, C., Overgaard, S., Andersen, Mikkel Rathsach & Hansen, L., 29 Nov 2023, In: BMC Anesthesiology. 23, 1, 12 p., 391.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theory for the stability and regulation of epigenetic landscapes
Micheelsen, M. A., Mitarai, Namiko, Sneppen, Kim & Dodd, I. B., 4 Jun 2010, In: Physical Biology. 7, 2, p. 026010 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The length distribution of frangible biofilaments
Michaels, T. C. T., Yde, Pernille, Willis, J. C. W., Jensen, Mogens Høgh, Otzen, D., Dobson, C. M., Buell, A. K. & Knowles, T. P. J., 28 Oct 2015, In: Journal of Chemical Physics. 143, 16Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechanical Forcing of Convection by Cold Pools: Collisions and Energy Scaling
Meyer, B. & Härter, Jan Olaf Mirko, 26 Oct 2020, In: Journal of Advances in Modeling Earth Systems. 12, 11, 20 p., e2020MS002281.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Real-time redox measurements during endoplasmic reticulum stress reveal interlinked protein folding functions
Merksamer, P., Trusina, Ala & Papa, F., 20 Nov 2008, In: Cell. 135, 5, p. 933-947Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling oscillatory control in NF-¿B, p53 and Wnt signaling
Mengel, B., Hunziker, A., Pedersen, L., Trusina, Ala, Jensen, Mogens Høgh & Krishna, S., 1 Dec 2010, In: Current Opinion in Genetics & Development. 20, 6, p. 656-64 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nested feedback loops in gene regulation
Mengel, A. B., Krishna, S., Jensen, Mogens Høgh & Trusina, Ala, 1 Jan 2012, In: Physica A: Statistical Mechanics and its Applications. 391, 1-2, p. 100-106Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of Growth and Mutation on Pattern Formation in Tissues
Mengel, A. B., Krishna, S., Chakraborty, S., Pigolotti, S., Sekara, V., Semsey, S. & Jensen, Mogens Høgh, 9 Nov 2012, In: P L o S One. 7, 11, p. e48772Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling Interaction Patterns at the Levels of Proteins, Cells and Humans
Mengel, A. B., 1 Jun 2011, Niels Bohr Institute ed. University of Copenhagen, Denmark. 75 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Bacteria solve the problem of crowding by moving slowly
Meacock, O. J., Doostmohammadi, Amin, Foster, K. R., Yeomans, J. M. & Durham, W. M., 23 Nov 2020, In: Nature Physics. 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deformation Precursors to Catastrophic Failure in Rocks
McBeck, J. A., Aiken, J. M., Mathiesen, Joachim, Ben-Zion, Y. & Renard, F., 28 Dec 2020, In: Geophysical Research Letters. 47, 24, 9 p., e2020GL090255.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Generic optimization by fast chaotic exploration and slow feedback fixation
Matsushita, Y. & Kaneko, Kunihiko, 10 Apr 2023, In: Physical Review Research. 5, 7 p., 023017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Avoidance of error catastrophe via proofreading innate to template-directed polymerization
Matsubara, Y. J., Takeuchi, N. & Kaneko, Kunihiko, 13 Mar 2023, In: Physical Review Research. 5, 13 p., 013170.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
From Pore Scale to Turbulent Flow with the Unstructured Lattice Boltzmann Method
Matin, R., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Evaluation of the finite element lattice Boltzmann method for binary fluid flows
Matin, R., Misztal, M. K., Hernandez-Garcia, A. & Mathiesen, Joachim, 15 Jul 2017, In: Computers and Mathematics with Applications. 74, 2, p. 281-291Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simulation-based study of micron scale, binary flows in porous rocks
Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, 6 Jun 2016, CMG 2016: 31st IUGG Conference on Mathematical Geophysics, Paris. Geo-Physics, from Mathematics to Experiments. Paris, FranceResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Finite-element lattice Boltzmann simulations of contact line dynamics
Matin, R., Krzysztof Misztal, M., Hernández-garcía, A. & Mathiesen, Joachim, 19 Jan 2018, In: Physical Review E. 97, 1, 013307.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simulating Anomalous Dispersion and Multiphase Segregation in Porous Media with the Lattice Boltzmann Method
Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Coherent structures in turbulent square duct flow
Matin, R., Hellström, L. H. O., Hernandez, A., Mathiesen, Joachim & Smits, A. J., 2018, In: International Journal of Heat and Fluid Flow. 74, p. 144-153Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Elasticity with arbitrarily shaped inhomogeneity
Mathiesen, Joachim, Procaccia, I. & Regev, I., 26 Feb 2008, In: Physical Review E. 77, 2, 026606.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Organizational structure and communication networks in a university environment
Mathiesen, Joachim, Jamtveit, B. & Sneppen, Kim, 2 Jul 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 82, 1, p. 016104 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modular networks of word correlations on Twitter
Mathiesen, Joachim, Yde, Pernille & Jensen, Mogens Høgh, 9 Nov 2012, In: Scientific Reports. 2, p. 814Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistics of co-occurring keywords in confined text messages on Twitter
Mathiesen, Joachim, Angheluta, L. & Jensen, Mogens Høgh, 1 Sep 2014, In: European Physical Journal. Special Topics. 223, 9, p. 1849-1858 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
"Want to understand the stock market? Just log in to Twitter"
Mathiesen, Joachim & Angheluta, L., 24 Oct 2013, In: The Conversation.Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes
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Short-range correlation of stress chains near solid-to-liquid transition in active monolayers
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Structural Rearrangements of Pigeon Cryptochrome 4 Undergoing a Complete Redox Cycle
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Dynamic control of the Bose-Einstein-like condensation transition in scalar active matter
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