- 2023
- Published
Coupled oscillator cooperativity as a control mechanism in chronobiology
Heltberg, Mathias Spliid, Jiang, Y., Fan, Y., Zhang, Z., Nielsen, Malthe Skytte Nordentoft, Lin, W., Qian, L., Ouyang, Q., Jensen, Mogens Høgh & Wei, P., 17 May 2023, In: Cell Systems. 14, 5, p. 382-391.e5 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lateral Organization of Plasma Membrane Proteins Studied Using Thermoplasmonics
Arastoo, Mohammadreza, 16 May 2023, Niels Bohr Institute ed. Copenhagen, Denmark: University of Copenhagen. 193 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Direct chemical induction of hepatocyte-like cells with capacity for liver repopulation
Bai, Y., Yang, Z., sgk681, sgk681, Ding, W., Qi, J., Liu, F., Wang, X., Zhou, B., Zhang, W., Zhuang, X., Li, G. & Zhao, Y., 1 May 2023, In: Hepatology. 77, 5, p. 1550-1565 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transition of social organisations driven by gift relationships
Itao, K. & Kaneko, Kunihiko, 29 Apr 2023, In: Humanities and Social Sciences Communications. 10, 1, 10 p., 188.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Nature Exposure is Associated With Reduced Smartphone Use
Minor, Kelton Ray, Glavind, Kristoffer Lind, Schwartz, A. J., Danforth, C. M., Lehmann, S. & Bjerre-Nielsen, Andreas, 27 Apr 2023, (E-pub ahead of print) In: Environment and Behavior.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Double-replica theory for evolution of genotype-phenotype interrelationship
Pham, Minh Tuan & Kaneko, Kunihiko, 21 Apr 2023, In: Physical Review Research. 5, 2, 13 p., 023049.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mechanical basis and topological routes to cell elimination
Monfared, S., Ravichandran, G., Andrade, J. & Doostmohammadi, Amin, 18 Apr 2023, In: eLife. 12, 20 p., 82435.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Thermoplasmonic Vesicle Fusion Reveals Membrane Phase Segregation of Influenza Spike Proteins
Moreno Pescador, Guillermo Sergio, Arastoo, Mohammadreza, Thusgaard Ruhoff, Victoria, Chiantia, S., Daniels, R. & Bendix, Poul Martin, 11 Apr 2023, In: Nano Letters. 23, 8, p. 3377-3384 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Generic optimization by fast chaotic exploration and slow feedback fixation
Matsushita, Y. & Kaneko, Kunihiko, 10 Apr 2023, In: Physical Review Research. 5, 7 p., 023017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Group-specific behavior change following terror attacks
Juul, J. L., Alessandretti, L., Dammeyer, Jesper, Zettler, Ingo, Jørgensen, Sune Lehmann & Mathiesen, Joachim, Apr 2023, In: Journal of Computational Social Science. 6, p. 1-18Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Roadmap for optical tweezers
Volpe, G., Maragò, O. M., Rubinsztein-Dunlop, H., Pesce, G., Stilgoe, A. B., Volpe, G., Tkachenko, G., Truong, V. G., Chormaic, S. N., Kalantarifard, F., Elahi, P., Käll, M., Callegari, A., Marqués, M. I., Neves, A. A. R., Moreira, W. L., Fontes, A., Cesar, C. L., Saija, R., Saidi, A. & 63 others, , Apr 2023, In: Journal of Physics-Photonics. 5, 2, 136 p., 022501.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Avoidance of error catastrophe via proofreading innate to template-directed polymerization
Matsubara, Y. J., Takeuchi, N. & Kaneko, Kunihiko, 13 Mar 2023, In: Physical Review Research. 5, 13 p., 013170.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The excitable fluid mosaic
Heimburg, Thomas Rainer, 1 Mar 2023, In: B B A - Biomembranes. 1865, 3, 11 p., 184104.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Collective rotational motion of freely expanding T84 epithelial cell colonies
Ascione, F., Caserta, S., Esposito, S., Rachela, V. V., Maiuri, L., Nejad, M. R., Doostmohammadi, Amin, Yeomans, J. M. & Guido, S., 22 Feb 2023, In: Journal of the Royal Society Interface. 20, 199, 12 p., 20220719.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diffusion dynamics and characterization of attogram masses in optically trapped single nanoparticles using laser-induced plasma imaging
Purohit, P., Fortes, F. J. J. & Laserna, J., 22 Feb 2023, In: Nano Research. 16, p. 7470-7480 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2
Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Immunostaining protocol for infiltrating brain cancer spheroids for light-sheet imaging
Bjorknes, B., Neye, O. E., Hamerlik, P. & Jauffred, Liselotte, 9 Feb 2023, In: PLoS ONE. 18, 2, 8 p., 0281161.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Homophily-Based Social Group Formation in a Spin Glass Self-Assembly Framework
Korbel, J., Lindner, S. D., Pham, Minh Tuan, Hanel, R. & Thurner, S., 30 Jan 2023, In: Physical Review Letters. 130, 5, 6 p., 057401.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Close, but not too close: a mesoscopic description of (a)symmetry and membrane shaping mechanisms
Thusgaard Ruhoff, Victoria, Bendix, Poul Martin & Pezeshkian, Weria, 16 Jan 2023, In: Emerging topics in life sciences. 7, 1, p. 81-93 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A bipartite function of ESRRB can integrate signaling over time to balance self-renewal and differentiation
Knudsen, Teresa Emmilie Toudal, Hamilton, W. B., Proks, Martin, Lykkegaard, M., Linneberg-Agerholm, Madeleine, Nielsen, Alexander Valentin, Perera Pérez, Marta, Malzard, L. L., Trusina, Ala & Brickman, Joshua Mark, 2023, In: Cell Systems. 14, 9, p. 788-805.e8Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A linear reciprocal relationship between robustness and plasticity in homeostatic biological networks
Hatakeyama, T. S. & Kaneko, Kunihiko, 2023, In: PLoS ONE. 18, 1, 11 p., e0277181.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epidemic modelling of monitoring public behavior using surveys during pandemic-induced lockdowns
Koher, A., Jørgensen, F., Petersen, M. B. & Lehmann, S., 2023, In: Communications Medicine. 3, 1, 10 p., 80.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the complex dynamics of biological oscillators and their downstream effects
Lucchetti, Alessandra, 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 133 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Fast detection of slender bodies in high density microscopy data
Alonso, Albert & Kirkegaard, Julius Bier, 2023, In: Communications Biology . 6, 1, 12 p., 754.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Jag1-Notch cis-interaction determines cell fate segregation in pancreatic development
sgk681, sgk681, Seymour, Philip Allan, Sneppen, Kim, Trusina, Ala, Egeskov-Madsen, A. L. R., Jørgensen, Mette Christine, Jensen, Mogens Høgh & Serup, Palle, 2023, In: Nature Communications. 14, 17 p., 348.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Label-free optical interferometric microscopy to characterize morphodynamics in living plants
Ebrahimi, Samira, Moreno Pescador, Guillermo Sergio, Persson, Staffan, Jauffred, Liselotte & Bendix, Poul Martin, 2023, In: Frontiers in Plant Science. 14, 8 p., 1156478.Research output: Contribution to journal › Review › Research › peer-review
- Published
Lineage tracing identifies heterogeneous hepatoblast contribution to cell lineages and postembryonic organ growth dynamics
Unterweger, Iris Anne, Klepstad, J., Hannezo, E., Lundegaard, Pia Rengtved, Trusina, Ala & Ober, Elke, 2023, In: PLOS Biology. 21, 10, 30 p., e3002315.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Models of low data stochastic time series in Cell dynamics and Covid-19
Martiny, E. S., 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 74 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Necking and failure of a particulate gel strand: signatures of yielding on different length scales
Thijssen, Kristian, Liverpool, T. B., Royall, P. C. & Jack, R. L., 2023, In: Soft Matter. 19, 38, p. 7412-7428 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population dynamics of phage-bacteria ecosystems under challenging conditions
Marantos, Anastasios, 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 131 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Protocol to assess metabolic activity of Pseudomonas aeruginosa by measuring heat flow using isothermal calorimetry
Beilharz, K., Kragh, K. N., Fritz, Blaine Gabriel, Kirkegaard, Julius Bier, Tolker-Nielsen, Tim, Bjarnsholt, Thomas & Lichtenberg, Mads, 2023, In: STAR Protocols. 4, 2, 102269.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The improved health utility of once-weekly subcutaneous semaglutide 2.4 mg compared with placebo in the STEP 1-4 obesity trials
Bjørner, Jakob Bue, Larsen, S., Lübker, C. & Holst-Hansen, T., 2023, In: Diabetes, Obesity and Metabolism. 25, 8, p. 2142-2150 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ultrafast Laser Excitation Improves LIBS Performance for the Analysis of Optically Trapped Single Nanoparticles Owing to Characteristic Interaction Mechanisms
Burgos-Palop, C., Purohit, P., Fortes, F. J. & Laserna, J., 2023, In: Analytical Chemistry. 95, 39, p. 14541-14550 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Emergence of growth and dormancy from a kinetic model of the Escherichia coli central carbon metabolism
Himeoka, Y. & Mitarai, Namiko, 30 Dec 2022, In: Physical Review Research. 4, 4, 23 p., 043223.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extracting, quantifying, and comparing dynamical and biomechanical properties of living matter through single particle tracking
Scott, S., Weiss, M., Selhuber-Unkel, C., Farhangibarooji, Younes, Sabri, A., Erler, Janine, Metzler, R. & Oddershede, L. B., 22 Dec 2022, In: Physical Chemistry Chemical Physics. 2023, 25, p. 1513-1537 26 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Uni- and multivariate bias adjustment methods in Nordic catchments: Complexity and performance in a changing climate br
Tootoonchi, F., Härter, Jan Olaf Mirko, Todorovic, A., Raty, O., Grabs, T. & Teutschbein, C., 20 Dec 2022, In: Science of the Total Environment. 853, 18 p., 158615.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emerging diversity in a population of evolving intransitive dice
Kirkegaard, Julius Bier & Sneppen, Kim, 17 Nov 2022, In: Physical Review E. 106, 5, 6 p., 054409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enhanced DNA repair through droplet formation and p53 oscillations
Heltberg, Mathias Spliid, Lucchetti, Alessandra, Hsieh, F., Duy Pham Minh Nguyen, Chen, S. & Jensen, Mogens Høgh, 10 Nov 2022, In: Cell. 185, 23, p. 4394-4408 26 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Autotoxin-mediated latecomer killing in yeast communities
Oda, A. H., Tamura, M., Kaneko, Kunihiko, Ohta, K. & Hatakeyama, T. S., 7 Nov 2022, In: PLOS Biology. 20, 11, 23 p., 3001844.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strength in numbers: effect of protein crowding on the shape of cell membranes
Thusgaard Ruhoff, Victoria, Moreno Pescador, Guillermo Sergio, Pezeshkian, Weria & Bendix, Poul Martin, 31 Oct 2022, In: Biochemical Society Transactions. 50, 5, p. 1257-1267 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comprehensive analysis of gene regulatory dynamics, fitness landscape, and population evolution during sexual reproduction
Okubo, K. & Kaneko, Kunihiko, 14 Oct 2022, In: New Journal of Physics. 24, 10, 13 p., 103017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database
Tang, Q., Ren, W., Wang, J. & Kaneko, Kunihiko, 7 Oct 2022, In: Molecular Biology and Evolution. 39, 10, 13 p., msac197.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of stretching on nerve excitability
Heimburg, Thomas Rainer, 7 Oct 2022, In: Human Movement Science. 86, 10 p., 103000.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differentiation of closely related mineral phases in Mars atmosphere using frequency domain laser-induced plasma acoustics
Alvarez-Llamas, C., Purohit, P., Moros, J. & Laserna, J., 15 Sep 2022, In: Analytica Chimica Acta. 1226, 8 p., 340261.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial heterogeneity affects predictions from early-curve fitting of pandemic outbreaks: a case study using population data from Denmark
Heltberg, Mathias Spliid, Michelsen, Christian Buus, Martiny, E. S., Christensen, L. E., Jensen, Mogens Høgh, Halasa, T. & Petersen, Troels Christian, 14 Sep 2022, In: Royal Society Open Science. 9, 9, 9 p., 220018.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A systematic evaluation on the impact of sample-related and environmental factors in the analytical performance of acoustic emission from laser-induced plasmas
Bosakova, M., Purohit, P., Alvarez-Llamas, C., Moros, J., Novotny, K. & Laserna, J., 8 Sep 2022, In: Analytica Chimica Acta. 1225, 9 p., 340224.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lockdowns exert selection pressure on overdispersion of SARS-CoV-2 variants
Nielsen, Bjarke Frost, Eilersen, Andreas Thomas, Simonsen, L. & Sneppen, Kim, 2 Sep 2022, In: Epidemics. 40, 7 p., 100613.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal NF-kappa B dynamics encodes the position, amplitude, and duration of local immune inputs
Son, M., Frank, T., Holst-Hansen, T., Wang, A. G., Junkin, M., Kashaf, S. S., Trusina, Ala & Tay, S., 2 Sep 2022, In: Science Advances. 8, 35, 14 p., 6240.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The geometry of evolved community matrix spectra
Lastad, S. B. & Härter, Jan Olaf Mirko, 29 Aug 2022, In: Scientific Reports. 12, 1, 11 p., 14668.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tumor spheroids accelerate persistently invading cancer cells
Audoin, M., Sogaard, M. T. & Jauffred, Liselotte, 29 Aug 2022, In: Scientific Reports. 12, 1, 11 p., 14713.Research output: Contribution to journal › Journal article › Research › peer-review
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes
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