Biocomplexity

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  1. Published

    Finite-element lattice Boltzmann simulations of contact line dynamics

    Matin, R., Krzysztof Misztal, M., Hernández-garcía, A. & Mathiesen, Joachim, 19 Jan 2018, In: Physical Review E. 97, 1, 013307.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Finite element modeling of the vocal folds with deformable interface tracking

    Granados, A., Brunskog, J., Misztal, M. K., Visseq, V. & Erleben, Kenny, 2014, Forum Acusticum. European Acoustics Association, 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  3. Published

    Finding diabetic nephropathy biomarkers in the plasma peptidome by high-throughput magnetic bead processing and MALDI-TOF-MS analysis

    Hansen, H. G., Overgaard, J., Lajer, M., Hubalek, F., Højrup, P., Pedersen, L., Tarnow, L., Rossing, Peter, Pociot, Flemming & McGuire, J. N., 1 Sep 2010, In: Proteomics - Clinical Applications. 4, 8-9, p. 697-705 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Filopodia rotate and coil by actively generating twist in their actin shaft

    Leijnse, N., Farhangibarooji, Younes, Arastoo, M. R., Sonder, S. L., Verhagen, B., Wullkopf, L., Erler, Janine, Semsey, S., Nylandsted, J., Oddershede, L. B., Doostmohammadi, Amin & Bendix, Poul Martin, 28 Mar 2022, In: Nature Communications. 13, 1, 16 p., 1636.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Fiber finding algorithm using stepwise tracing to identify biopolymer fibers in noisy 3D images

    Rossen, Ninna Struck, Kyrsting, A., Giaccia, A. J., Erler, Janine & Oddershede, L. B., 2021, In: Biophysical Journal. 120, 18, p. 3860-3868 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Feasibility of a novel liquid fiducial marker for use in image guided radiotherapy of oesophageal cancer

    De Blanck, S. R., Scherman-Rydhog, J., Siemsen, Mette, Christensen, M., Baeksgaard, L., Jolck, R. I., Specht, Lena, Andresen, T. L. & Persson, Gitte F., 9 Jul 2018, In: British Journal of Radiology. 91, 1092, 5 p., 20180236.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Fear and its implications for stock markets

    Simonsen, I., Ahlgren, P. H., Jensen, Mogens Høgh, Danangelo, R. & Sneppen, Kim, 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 2, p. 153-158

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Fast intra-fractional image-guidance with 6D positioning correction reduces delivery uncertainty for stereotactic radiosurgery and radiotherapy

    Tarnavski, N., Engelholm, S. A. & Munck af Rosenschöld, P. M., 2 Aug 2016, In: Journal of Radiosurgery and SBRT. 4, 1, p. 15-20

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Fast detection of slender bodies in high density microscopy data

    Alonso, Albert & Kirkegaard, Julius Bier, 2023, In: Communications Biology . 6, 1, 12 p., 754.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Fast Translation within the First 45 Codons Decreases mRNA Stability and Increases Premature Transcription Termination in E. coli

    Pedersen, Steen, Terkelsen, Thilde Bagger, Eriksen, M., Hauge, M. K., Lund, C. C., Sneppen, Kim & Mitarai, Namiko, 2019, In: Journal of Molecular Biology. 431, 6, p. 1088-1097 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Faf1 is expressed during neurodevelopment and is involved in Apaf1-dependent caspase-3 activation in proneural cells

    De Zio, D., Ferraro, E., D'Amelio, M., Simoni, V., Bordi, M., Soroldoni, D., Berghella, L., Meyer, B. I. & Cecconi, F., Jun 2008, In: Cellular and Molecular Life Sciences. 65, 11, p. 1780-1790 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    FBAR syndapin 1 recognizes and stabilizes highly curved tubular membranes in a concentration dependent manner

    Ramesh, P., Farhangibarooji, Younes, Seyyed Reihani, S. N., Stamou, Dimitrios, Oddershede, L. B. & Bendix, Poul Martin, 31 Jan 2013, In: Scientific Reports. 3, p. 1565-(1-6)

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Extracting, quantifying, and comparing dynamical and biomechanical properties of living matter through single particle tracking

    Scott, S., Weiss, M., Selhuber-Unkel, C., Farhangibarooji, Younes, Sabri, A., Erler, Janine, Metzler, R. & Oddershede, L. B., 22 Dec 2022, In: Physical Chemistry Chemical Physics. 2023, 25, p. 1513-1537 26 p.

    Research output: Contribution to journal › Review › Research › peer-review

  14. Published

    Extracting the interdisciplinary specialty structures in social media data-based research: A clustering-based network approach

    Fan, Yangliu, Lehmann, S. & Blok, Anders, 2022, In: Journal of Informetrics. 16, 3, 18 p., 101310.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Extracellular matrix sensing via modulation of orientational order of integrins and F-actin in focal adhesions

    Grudtsyna, Valeriia, Packirisamy, S., Bidone, T. C. & Swaminathan, V., 10 Aug 2023, In: Life Science Alliance. 6, 10, 16 p., e202301898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Extending the lateral trapping force of optical tweezers - art. no. 664420

    Richardson, A. C., Seyyed Reihani, S. N. & Oddershede, L. B., 2007, PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS: OPTICAL TRAPPING AND OPTICAL MICROMANIPULATION IV. SPIE - International Society for Optical Engineering, Vol. 6644. p. 64420-64420

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  17. Published

    Exploring the contribution of exposure heterogeneity to the cessation of the 2014 Ebola epidemic

    Uekermann, F., Simonsen, L. & Sneppen, Kim, 1 Feb 2019, In: PLoS ONE. 14, 2, 11 p., e0210638.

    Research output: Contribution to journal › Review › Research › peer-review

  18. Published

    Exploring the complex dynamics of biological oscillators and their downstream effects

    Lucchetti, Alessandra, 2023, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 133 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Exploring the collective spin-isospin longitudinal response of nuclei with coherent pion production in (He-3, t pi(+))

    Boyard, J., Farhi, L., Hennino, T., Jourdain, J., Kunne, R., Radvanyi, P., Ramstein, B., Roy-Stephan, M., Dahl, R., Drews, M., Ellegaard, Clive Sigurd, Gaarde, C., Jensen, J., Skousen, M., Kagarlis, M., Augustyniak, W. & Zupranski, P., 1 Oct 2000, In: Acta Physica Polonica B. 31, 10-11, p. 2139-2142

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Exploring the Link between Nucleosome Occupancy and DNA Methylation

    Lövkvist, Cecilia, Sneppen, Kim & Härter, Jan Olaf Mirko, 12 Jan 2018, In: Frontiers in Genetics. 8, 7 p., 232.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Expert Game experiment predicts emergence of trust in professional communication networks

    Bendtsen, K. M., Uekermann, F. & Härter, Jan Olaf Mirko, 25 Oct 2016, In: Proceedings of the National Academy of Sciences USA (PNAS). 113, 43, p. 12099-12104

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Experiments on elastomechanical wave functions in chaotic plates and their statistical features

    Schaadt, K., Guhr, T., Ellegaard, Clive Sigurd & Oxborrow, M., 1 Sep 2003, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 68, 3, 036205.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Experimental single molecule fluorescence microscopy for investigation of embryonic stem cell priming and transcription regulation

    Hvid, K. G., 2019, Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  24. Published

    Experimental results on flow separation and transitions in the circular hydraulic jump

    Ellegaard, Clive Sigurd, Hansen, A., Haaning, A. & Bohr, T., 21 May 1996, In: Physica Scripta. T67

    Research output: Contribution to journal › Conference article › Research › peer-review

  25. Published

    Experimental observation of shear thickening oscillation

    Nagahiro, S., Nakanishi, H. & Mitarai, Namiko, 1 Oct 2013, In: EPL. 104, 2, 28002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Experimental investigation of walking drops: Wave field and interaction with slit structures

    Ellegaard, Clive Sigurd & Levinsen, Mogens, 11 Mar 2024, In: Physical Review E. 109, 3, 21 p., 035101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Experiment and model for the dynamics of vortex ripples in sand

    Abel, M., Andersen, K. H., Ellegaard, Clive Sigurd, Krug, J., Søndergaard, L. R. & Udesen, J., 1 Apr 2003, In: AIP Conference Proceedings. 676, p. 171-181

    Research output: Contribution to journal › Conference article › Research › peer-review

  28. Published

    Expanding the optical trapping range of lipid vesicles to the nano-scale

    Bendix, Poul Martin & Oddershede, L. B., 2011, In: Nano Letters. 11, 12, p. 5431–5437 7 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  29. Published

    Expanding the optical trapping range of gold nanoparticles

    Bendix, Poul Martin, Bhatia, V. K., Harrit, N. & Oddershede, L. B., 2005, In: Nano Letters. 5, 10, p. 1937-1942 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Expanding the genetic code of a phototrophic organism

    Chemla, Y., Friedman, M., Heltberg, Mathias Spliid, Bakhrat, A., Nagar, E., Schwarz, R., Jensen, Mogens Høgh & Alfonta, L., 10 Sep 2017, In: Biochemistry. 56, 16, p. 2161-2165

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Expanding the Optical Trapping Range of Lipid Vesicles to the Nanoscale

    Bendix, Poul Martin & Oddershede, L. B., 1 Dec 2011, In: Nano Letters. 11, 12, p. 5431-5437

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse

    Svenningsen, Mikkel Skjoldan, Svenningsen, Sine Lo, Sørensen, Michael Askvad & Mitarai, Namiko, 2022, In: Life Science Alliance. 5, 2, 9 p., e202101076.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Existence and construction of large stable food webs

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Executive attention control impairments and social anxiety symptoms in children

    Reinholdt-Dunne, M. L., Blicher, A., Rinck, M. & Klein, A., 2022, In: Journal of Experimental Psychopathology. 13, 2, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Excitable human dynamics driven by extrinsic events in massive communities

    Mathiesen, Joachim, Angheluta, L., Ahlgren, P. T. H. & Jensen, Mogens Høgh, 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17259-17262

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Evolutionary shaping of low-dimensional path facilitates robust and plastic switching between phenotypes

    Sakata, A. & Kaneko, Kunihiko, 26 Dec 2023, In: Physical Review Research. 5, 4, 19 p., 043296.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Evolution of lead precipitates in ion implanted aluminium

    Bourdelle, K. K., Johansen, A., Schmidt, B., Andersen, H. H., Johnson, Erik, Sarholt-Kristensen, L., Steenstrup, S. & Yu, L. D., 1993, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. B80/81, p. 317-322

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Evolution of cell motility in an individual-based model of tumour growth

    Gerlee, P. D. M. & Anderson, A. R. A., 2009, In: Journal of Theoretical Biology. 259, 1, p. 67-83 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Evolution of a G protein-coupled receptor response by mutations in regulatory network interactions

    Di Roberto, R. B., Chang, B., Trusina, Ala & Peisajovich, S. G., 4 Aug 2016, In: Nature Communications. 7, 12344.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Evidence of coherent π+ production in (3He,t) reactions.

    Dahl, R., Farhi, L., Augustiniak, W., Boyard, J. L., Drews, M., Ellegaard, Clive Sigurd, Gaarde, C., Hennino, T., Jensen, J., Jourdain, J. C., Kunne, R., Larsen, J., Radvanyi, P., Ramstein, B., Roy-Stephan, M., Skousen, M. & Zupranski, P., 1 Nov 1998, In: Acta Physica Polonica B. 29, 11, p. 3009-3013

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Evidence for a conserved quantity in human mobility

    Alessandretti, L., Sapiezynski, P., Sekara, V., Lehmann, S. & Baronchelli, A., 1 Jul 2018, In: Nature Human Behaviour. 2, 7, p. 485-491

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Evaluation of the finite element lattice Boltzmann method for binary fluid flows

    Matin, R., Misztal, M. K., Hernandez-Garcia, A. & Mathiesen, Joachim, 15 Jul 2017, In: Computers and Mathematics with Applications. 74, 2, p. 281-291

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Evaluation of the Unstructured Lattice Boltzmann Method in Porous Flow Simulations

    Misztal, M. K., Matin, R., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.

    Research output: Contribution to conference › Conference abstract for conference › Research

  44. Published

    Estimated risk of cardiovascular disease and secondary cancers with modern highly conformal radiotherapy for early-stage mediastinal Hodgkin lymphoma

    Maraldo, M. V., Brodin, N. P., Aznar, M. C., Vogelius, I. R., Munck af Rosenschöld, P. M., Petersen, P. M. & Specht, Lena, 1 Aug 2013, In: Annals of Oncology. 24, 8, p. 2113-2118

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Establishment of heterochromatin in domain-size-dependent bursts

    Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Equilibrium simulations of proteins using molecular fragment replacement and NMR chemical shifts

    Boomsma, Wouter, Tian, P., Frellsen, J., Ferkinghoff-Borg, J., Hamelryck, Thomas Wim, Lindorff-Larsen, Kresten & Vendruscolo, M., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 38, p. 13852-13857 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Equilibrium Strategy and Population-Size Effects in Lowest Unique Bid Auctions

    Pigolotti, S., Bernhardsson, P. J. S., Juul, J. S., Galster, G. & Vivo, P., 22 Feb 2012, In: Physical Review Letters. 108, 8, p. 088701 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Epigenetic switching with asymmetric bridging interactions

    Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Epigenetic Ratchet: Spontaneous Adaptation via Stochastic Gene Expression

    Himeoka, Y. & Kaneko, K., 16 Jan 2020, In: Scientific Reports. 10, 1, 7 p., 459.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Epidemic modelling of monitoring public behavior using surveys during pandemic-induced lockdowns

    Koher, A., Jørgensen, F., Petersen, M. B. & Lehmann, S., 2023, In: Communications Medicine. 3, 1, 10 p., 80.

    Research output: Contribution to journal › Journal article › Research › peer-review

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