Biocomplexity

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  1. 2013
  2. Published

    Energetics and efficiency of a molecular motor model

    Fogedby, H. C. & Svane, A., 2 Dec 2013, In: Journal of Statistical Mechanics: Theory and Experiment. 2013, P12001.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Foot-and-mouth disease virus serotype O phylodynamics: genetic variability associated with epidemiological factors in Pakistan

    Brito, B. P., Gonzalez-Perez, Alfredo, Jamal, S. M., Belsham, Graham John, Pauszek, S. J., Ahmed, Z. & Rodriguez, L. L., Dec 2013, In: Transboundary and Emerging Diseases. 60, 6, p. 516-24 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Dose escalation to high-risk sub-volumes based on non-invasive imaging of hypoxia and glycolytic activity in canine solid tumors: a feasibility study

    Clausen, Malene Martini, Hansen, A. E., Munck af Rosenschöld, P. M., Kjær, Andreas, Kristensen, Annemarie T., McEvoy, Fintan & Engelholm, S. A., 7 Nov 2013, In: Radiation Oncology. 8, 262.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The impact of leaf width and plan complexity on DMLC tracking of prostate intensity modulated arc therapy

    Pommer, T., Falk, M., Poulsen, P. R., Keall, P. J., O'Brien, R. T. & Munck af Rosenschöld, P. M., 1 Nov 2013, In: Medical Physics. 40, 11, 111717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    "Want to understand the stock market? Just log in to Twitter"

    Mathiesen, Joachim & Angheluta, L., 24 Oct 2013, In: The Conversation.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  7. Published

    DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch

    Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Excitable human dynamics driven by extrinsic events in massive communities

    Mathiesen, Joachim, Angheluta, L., Ahlgren, P. T. H. & Jensen, Mogens Høgh, 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17259-17262

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Moderate stem-cell telomere shortening rate postpones cancer onset in a stochastic model

    Holbek, S., Bendtsen, K. M. & Juul, J. S., 21 Oct 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 4, p. 1-7 7 p., 042706.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Revealing Hidden Dynamics within Living Soft Matter

    Ott, D., Bendix, Poul Martin & Oddershede, L. B., 11 Oct 2013, In: A C S Nano. 7, 10, p. 8333-8339

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Control of ribosome traffic by position-dependent choice of synonymous codons

    Mitarai, Namiko & Pedersen, Steen, 8 Oct 2013, In: Physical Biology. 10, 5, 056011.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Deep inspiration breath hold radiotherapy for locally advanced lung cancer: Comparison of different treatment techniques on target coverage, lung dose and treatment delivery time

    Josipovic, Mirjana, Persson, Gitte F., Hakansson, K., Bangsgaard, J. P., Damkjær, S. M., Westman, G., Specht, Lena & Aznar, M. C., 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1582-1586

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Doses to Carotid Arteries After Modern Radiation Therapy for Hodgkin Lymphoma: Is Stroke Still a Late Effect of Treatment?

    Maraldo, M. V., Brodin, N. P., Aznar, M. C., Petersen, P. M., Munck af Rosenschöld, P. M. & Specht, Lena, 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. 297-303

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Experimental observation of shear thickening oscillation

    Nagahiro, S., Nakanishi, H. & Mitarai, Namiko, 1 Oct 2013, In: EPL. 104, 2, 28002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Impact of Treatment Margins and Treatment Technique in Hippocampal Sparing Radiation Therapy for Pediatric Medulloblastoma

    Brodin, N. P., Munck af Rosenschöld, P. M., Berthelsen, A. K., Vogelius, I., Hollensen, C., Blomstrand, M., Bentzen, S. M. & Bjork-Eriksson, T., 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. S595-S595

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Modeling freedom from progression for standard-risk medulloblastoma: a mathematical tumor control model with multiple modes of failure

    Brodin, N. P., Vogelius, I. R., Bjørk-Eriksson, T. & Munck af Rosenschöld, P. M., 1 Oct 2013, In: International Journal of Radiation Oncology, Biology, Physics. 87, 2, p. 422-429

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Reduced lung dose and improved inspiration level reproducibility in visually guided DIBH compared to audio coached EIG radiotherapy for breast cancer patients

    Damkjær, S. M. S., Aznar, M. C., Pedersen, A. N., Vogelius, I. P., Bangsgaard, J. P. & Josipovic, M., 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1458-1463

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The effect on esophagus after different radiotherapy techniques for early stage Hodgkin's lymphoma

    Jørgensen, A., Maraldo, M., Brodin, N. P., Aznar, M. C., Voglius, I. R., Petersen, P. M., Munck af Rosenschöld, P. M. & Specht, Lena, 1 Oct 2013, In: Acta Oncologica. 52, 7, p. 1559-1565

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The dynamics of genetic control in the cell: the good and bad of being late

    Tiana, G. & Jensen, Mogens Høgh, 28 Sep 2013, In: Philosophical Transactions. Series A : Mathematical, physical, and engineering science. 371, 1999; SI, 20120469.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Fluctuations of systems in finite heat reservoirs with applications to phase transitions in lipid membranes

    Mosgaard, L. D., Jackson, Andrew D. & Heimburg, Thomas Rainer, 25 Sep 2013, In: Journal of Chemical Physics. 139, 12, 125101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Concomitance in single bubble sonoluminescence of period doubling in emission and shape distortion

    Levinsen, Mogens, 10 Sep 2013, In: Ultrasonics. 54, 2, p. 637-643

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Rotation-induced grain growth and stagnation in phase-field crystal models

    Bjerre, M., Tarp, J. M., Angheluta, L. & Mathiesen, Joachim, 15 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 4 p., 020401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Replicator dynamics with turnover of players

    Juul, J. S., Kianercy, A., Bernhardsson, S. & Pigolotti, S., 8 Aug 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 88, 2, 9 p., 022806.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    A Versatile Approach towards the Compaction, Decompaction, and Immobilization of DNA at Interfaces by Using Cyclodextrins

    Gonzalez-Perez, Alfredo & Ruso, J. M., 5 Aug 2013, In: ChemPhysChem. 14, 11, p. 2544-2553

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy

    Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Estimated risk of cardiovascular disease and secondary cancers with modern highly conformal radiotherapy for early-stage mediastinal Hodgkin lymphoma

    Maraldo, M. V., Brodin, N. P., Aznar, M. C., Vogelius, I. R., Munck af Rosenschöld, P. M., Petersen, P. M. & Specht, Lena, 1 Aug 2013, In: Annals of Oncology. 24, 8, p. 2113-2118

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Quantitative determination of optical trapping strength and viscoelastic moduli inside living cells

    Soler, J. M., Richardson, A. C., Seyyed Reihani, S. N., Oddershede, L. B. & Berg-Sørensen, K., 1 Aug 2013, In: Physical Biology. 10, 4, 046006.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Lipid Ion Channels and the Role of Proteins

    Mosgaard, L. D. & Heimburg, Thomas Rainer, 31 Jul 2013, In: Accounts of Chemical Research. 46, 12, p. 2966-2976

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The role of Rydberg states in photoionization of NO2 and (NO+, O-) ion pair formation induced by one VUV photon

    Poullian, S. M., Veyrinas, K., Billaud, P., Lebech, M., Picard, Y., Lucchese, R. R. & Dowek, D., 28 Jul 2013, In: Journal of Chemical Physics. 139, 4, 044311.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Three-dimensional MRI-linac intra-fraction guidance using multiple orthogonal cine-MRI planes

    Bjerre, T., Crijns, S., Munck af Rosenschöld, P. M., Aznar, M. C., Specht, Lena, Larsen, R. & Keall, P., 21 Jul 2013, In: Physics in Medicin and biology. 58, 14, p. 4943-4950

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Genetic Regulatory Networks that count to 3

    Lehmann, M. & Sneppen, Kim, 1 Jul 2013, In: Journal of Theoretical Biology. 329, p. 15-19 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli

    Semsey, S., Jauffred, Liselotte, Csiszovszki, Z., Erdossy, J., Steger, V., Hansen, S. & Krishna, S., 1 Jul 2013, In: Nucleic Acids Research. 41, 13, p. 6381-6390

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Clustering Determines Who Survives for Competing Brownian and Levy Walkers

    Heinsalu, E., Hernandez-Garcia, E. & Cristobal, L., 18 Jun 2013, In: Physical Review Letters. 110, 25, 258101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Entrainment of noise-induced and limit cycle oscillators under weak noise

    Mitarai, Namiko, Alon, U. & Jensen, Mogens Høgh, 1 Jun 2013, In: Chaos. 23, 2, 023125.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Shear and Rapeseed Oil Addition Affect the Crystal Polymorphic Behavior of Milk Fat

    Kaufmann, N., Kirkensgaard, Jacob Judas Kain, Andersen, U. & Wiking, L., 1 Jun 2013, In: Journal of the American Oil Chemists' Society. 90, 6, p. 871-880

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Maximum Likelihood Reconstruction for Ising Models with Asynchronous Updates

    Zeng, H., Alava, M., Aurell, E., Hertz, John & Roudi, Y., 20 May 2013, In: Physical Review Letters. 110, 21, 210601.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Quality control system response to stochastic growth of amyloid fibrils

    Pigolotti, S., Lizana, L., Sneppen, Kim & Otzen, D., 2 May 2013, In: F E B S Letters. 587, 9, p. 1405-1410 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Differentiation of developing olfactory neurons analysed in terms of coupled epigenetic landscapes

    Alsing, A. & Sneppen, Kim, 1 May 2013, In: Nucleic Acids Research. 41, 9, 4755-4764.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Anomalous diffusion and power-law relaxation of the time averaged mean squared displacement in worm-like micellar solutions

    Joen, J., Leijnse, N., Oddershede, L. B. & Metzler, R., 17 Apr 2013, In: New Journal of Physics. 15, p. 045011

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Labyrinthine clustering in a spatial rock-paper-scissors ecosystem

    Juul, J. S., Sneppen, Kim & Mathiesen, Joachim, 8 Apr 2013, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 87, 4, p. 042702 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Dosimetric benefit of DMLC tracking for conventional and sub-volume boosted prostate intensity-modulated arc radiotherapy

    Pommer, T., Falk, M., Poulsen, P. R., Keall, P. J., O'Brien, R. T., Petersen, P. M. & Munck af Rosenschöld, P. M., 7 Apr 2013, In: Physics in Medicine and Biology. 58, 7, p. 2349-2361

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Effects of City-Size Heterogeneity on Epidemic Spreading in a Metapopulation: A Reaction-Diffusion Approach

    Lund, H., Lizana, G. L. & Simonsen, I., 1 Apr 2013, In: Journal of Statistical Physics. 151, 2, p. 367-382

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Proteins and Peptides in Biomimetic Polymeric Membranes

    Gonzalez-Perez, Alfredo, 5 Mar 2013, Proteins in Solution and at Interface: Methods and Applications in Biotechnology and Materials Science. Ruso, J. M. & Piñeiro, A. (eds.). Hoboken, NJ, USA. : Wiley, p. 283-290 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  44. Published

    Growth, competition and cooperation in spatial population genetics

    Pigolotti, S., Benzi, R., Perlekar, P., Jensen, Mogens Høgh, Toschi, F. & Nelson, D. R., 1 Mar 2013, In: Theoretical Population Biology. 84, p. 72-86

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Patient QA systems for rotational radiation therapy: A comparative experimental study with intentional errors

    Fredh, A., Scherman, J. B. & Munck af Rosenschöld, P. M., 1 Mar 2013, In: Medical Physics. 40, 3, 031716.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Strong increase in convective precipitation in response to higher temperatures

    Berg, P., Moseley, C. & Härter, Jan Olaf Mirko, 1 Mar 2013, In: Nature Geoscience. 6, 3, p. 181-185 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The effect of nonstationarity on models inferred from neural data

    Tyrcha, J., Roudi, Y. & Hertz, John, 1 Mar 2013, In: Journal of Statistical Mechanics: Theory and Experiment. 2013, P03005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Noisy transcription factor NF-¿B oscillations stabilize and sensitize cytokine signaling in space

    Gangstad, S. W., Feldager, C. W., Juul, J. S. & Trusina, Ala, 5 Feb 2013, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 87, 2, p. 022702

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    konkureerivad Browni ja Levy uitlejad

    Heinsalu, E., 1 Feb 2013, In: Estonian Physical Society. p. 81-95

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    FBAR syndapin 1 recognizes and stabilizes highly curved tubular membranes in a concentration dependent manner

    Ramesh, P., Farhangibarooji, Younes, Seyyed Reihani, S. N., Stamou, Dimitrios, Oddershede, L. B. & Bendix, Poul Martin, 31 Jan 2013, In: Scientific Reports. 3, p. 1565-(1-6)

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    3 Dimensional Cellular Force Microscopy in Fibrin Gels

    Adhikari, A., Leijnse, N., Owen, L., Oddershede, L. B. & Dunn, A. R., 29 Jan 2013, In: Biophysical Journal. 104, 2,Supp. 1, p. 214A-214A

    Research output: Contribution to journal › Journal article › Research › peer-review

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