Biocomplexity

  1. 2015
  2. Published

    The length distribution of frangible biofilaments

    Michaels, T. C. T., Yde, Pernille, Willis, J. C. W., Jensen, Mogens Høgh, Otzen, D., Dobson, C. M., Buell, A. K. & Knowles, T. P. J., 28 Oct 2015, In: Journal of Chemical Physics. 143, 16

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Dynamic buckling of actin within filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 21 Oct 2015, In: Communicative & Integrative Biology. 8, 2, p. e1022010

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Temporal fidelity in dynamic social networks

    Stopczynski, A., Sapiezynski, P., Pentland, A. '. & Jørgensen, Sune Lehmann, 7 Oct 2015, In: European Physical Journal B. Condensed Matter and Complex Systems. 88, 10

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    The role of mRNA and protein stability in the function of coupled positive and negative feedback systems in eukaryotic cells

    Bendtsen, K. M., Jensen, Mogens Høgh, Krishna, S. & Semsey, S., 14 Sep 2015, In: Scientific Reports. 5, 13910.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Diversity Waves in Collapse-Driven Population Dynamics

    Maslov, S. & Sneppen, Kim, 1 Sep 2015, In: P L o S One. 11, 9, e1004440.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Vocal Fold Collision Modeling

    Granados, A., Brunskog, J. & Misztal, M. K., 31 Aug 2015, Proceedings of the 9th International Workshop on Models and Analysis of Vocal Emissions for Biomedical Application: The 11th Pan-European Voice Conference (PEVOC 2015) and the 9th International Workshop on Models and Analysis of Vocal Emissions for Biomedical Application (MAVEBA 2015), 31-8-2015-04-09-2015. Florence, Italy, Vol. 4.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  8. Published

    Optical trapping of gold aerosols

    Schmitt, R. K., Jauffred, Liselotte, Taheri, S. M., Linke, H. & Oddershede, L. B., 25 Aug 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE - International Society for Optical Engineering, Vol. 9548. 95480F-1

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  9. Published

    Mechano-capacitive properties of polarized membranes

    Mosgaard, L. D., Zecchi, K. A. & Heimburg, Thomas Rainer, 21 Aug 2015, In: Soft Matter. 11, 40, p. 7899-7910

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity

    Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    An easy-to-prepare mini-scaffold for DNA origami

    Brown, Stanley, Majikes, J., Martinez, A., Giron, T. M., Fennell, H., Samano, E. C. & LaBean, T. H., 22 Jul 2015, In: Nanoscale. 7, 40, p. 16621-16624

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades

    Hansen, S., Krishna, S., Semsey, S. & Svenningsen, Sine Lo, 17 Jul 2015, In: Scientific Reports. 5, 12186.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Double-slit experiment with single wave-driven particles and its relation to quantum mechanics

    Andersen, A., Madsen, J., Reichelt, C., Ahl, S. R., Lautrup, B. E., Ellegaard, Clive Sigurd, Levinsen, Mogens & Bohr, T., 6 Jul 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 013006.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Optical Trapping of Gold Nanoparticles in Air

    Jauffred, Liselotte, Taheri, S. M., Schmitt, R., Linke, H. & Oddershede, L. B., 1 Jul 2015, In: Nano Letters. 15, 7, p. 4713-4719

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Tracking Human Mobility Using WiFi Signals

    Sapiezynski, P., Stopczynski, A., Gatej, R. & Jørgensen, Sune Lehmann, 1 Jul 2015, In: PloS one. 10, 7, 013024.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Two-phase Flow Simulations Using the Lattice Boltzmann Method on Unstructured Grids.

    Misztal, M. K., Matin, R., Hernandez, A. & Mathiesen, Joachim, 1 Jul 2015, 224th International Conference on Discrete Simulation of Fluid Dynamics, 13th-17th July. The Royal Society of Edinburgh ed. Edinburgh

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  17. Published

    Unraveling the Mesoscopic Character of Quantum Dots in Nanophotonics

    Tighineanu, P., Sørensen, Anders Søndberg, Stobbe, S. & Lodahl, Peter, 19 Jun 2015, In: Physical Review Letters. 114, 24, 247401.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Restriction modification systems as engines of diversity

    Sneppen, Kim, Semsey, S., Seshasayee, A. S. N. & Krishna, S., 2 Jun 2015, In: Frontiers in Microbiology. 6, 528.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Well-temperate phage: optimal bet-hedging against local environmental collapses

    Maslov, S. & Sneppen, Kim, 2 Jun 2015, In: Scientific Reports. 5, 10523.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Vesicle Fusion Triggered by Optically Heated Gold Nanoparticles

    Rorvig-Lund, A., Bahadori, Azra, Semsey, S., Bendix, Poul Martin & Oddershede, L. B., 1 Jun 2015, In: Nano Letters. 15, 6, p. 4183-4188

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Voices of chemical biology

    Bertozzi, C. R., Stockwell, B. R., Kubicek, S., Dickinson, B. C., Chang, C. J., Schultz, C., Silver, P. A., Gestwicki, J. E., Chiosis, G., Chattopadhyay, A., Butcher, R. A., Park, S. B., Shoichet, B. K., Flitsch, S. L., Zhang, J., Liu, D. R., Ohnishi, Y., Weerapana, E., Williams, A. H., He, C. & 11 others, Moroni, A., Thiel, G., Chang, Y., Waldmann, H., Bogyo, M., Oddershede, L. B., Christopoulos, A., Imperiali, B., Ehrlich, H., Chen, X. & Prescher, J. A., 1 Jun 2015, In: Nature Chemical Biology. 11, 6, p. 378-379

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Quantification and comparison of visibility and image artifacts of a new liquid fiducial marker in a lung phantom for image-guided radiation therapy

    Rydhog, J. S., Jolck, R. I., Andresen, T. L. & Munck af Rosenschöld, P. M., Jun 2015, In: Medical Physics. 42, 6, p. 2818-2826

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Temporal and spatial scaling impacts on extreme precipitation

    Eggert, B., Berg, P., Härter, Jan Olaf Mirko, Jacob, D. & Moseley, C., 29 May 2015, In: Atmospheric Chemistry and Physics. 15, 10, p. 5957-5971

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Belief propagation and replicas for inference and learning in a kinetic Ising model with hidden spins

    Battistin, C., Hertz, John, Tyrcha, J. & Roudi, Y., 10 May 2015, In: Journal of Statistical Mechanics: Theory and Experiment. 2015, P05021.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    A 3 ' External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise

    Lalaouna, D., Carrier, M., Semsey, S., Brouard, J., Wang, J., Wade, J. T. & Masse, E., 7 May 2015, In: Molecular Cell. 58, 3, p. 393-405

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Minimizing Late Effects for Patients With Mediastinal Hodgkin Lymphoma: Deep Inspiration Breath-Hold, IMRT, or Both?

    Aznar, M. C., Maraldo, M. V., Schut, D. A., Lundemann, M., Brodin, N. P., Vogelius, Ivan R. , Berthelsen, A. K., Specht, Lena & Petersen, P. M., 1 May 2015, In: International Journal of Radiation Oncology, Biology, Physics. 92, 1, p. 169-174

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies

    Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Cumulants of Hawkes point processes

    Jovanovic, S., Hertz, John & Rotter, S., 7 Apr 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 91, 4, 9 p., 042802.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae

    Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Use of PET/CT instead of CT-only when planning for radiation therapy does not notably increase life years lost in children being treated for cancer

    Kornerup, J. S., Brodin, N. P., Christensen, C. B., Bjork-Eriksson, T., Kiil-Berthelsen, A., Borgwardt, L. & af Rosenschold, P. M., Apr 2015, In: Pediatric Radiology. 45, 4, p. 570-581

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Statistical precipitation bias correction of gridded model data using point measurements

    Härter, Jan Olaf Mirko, Eggert, B., Moseley, C., Piani, C. & Berg, P., 28 Mar 2015, In: Geophysical Research Letters (Online). 42, 6, p. 1919-1929

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    A monomer-trimer model supports intermittent glucagon fibril growth

    Kosmrlj, A., Cordsen, P., Kyrsting, A., Otzen, D., Oddershede, L. B. & Jensen, Mogens Høgh, 11 Mar 2015, In: Scientific Reports. 5, 9005.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Observation of Motion-Dependent Nonlinear Dispersion with Narrow-Linewidth Atoms in an Optical Cavity

    Westergaard, P. G., Christensen, B. T. R., Tieri, D., Matin, R., Cooper, J., Holland, M., Ye, J. & Thomsen, Jan Westenkær, 4 Mar 2015, In: Physical Review Letters. 114, 9, 093002.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    PET/CT-guided treatment planning for paediatric cancer patients: a simulation study of proton and conventional photon therapy

    Kornerup, J. S., Brodin, N. P., Bjork-Eriksson, T., Christensen, C. B., Kiil-Berthelsen, A., Aznar, M. C., Hollensen, C., Markova, E. & Af Rosenschold, P. M., 1 Mar 2015, In: British Journal of Radiology. 88, 1047, 20140586.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Spatial patterns of competing random walkers

    Hernandez-Garcia, E., Heinsalu, E. & Lopez, C., 1 Mar 2015, In: Ecological Complexity: An International Journal on Biocomplexity in the Environment and Theoretical Ecology. 21, SI, p. 166-176

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Full simulation of chiral random matrix theory at nonzero chemical potential by complex Langevin

    Mollgaard, A. & Splittorff, Kim, 26 Feb 2015, In: Physical Review D (Particles, Fields, Gravitation and Cosmology). 91, 3, 036007.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    An updated look at actin dynamics in filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 1 Feb 2015, In: Cytoskeleton. 72, 2, p. 71-79

    Research output: Contribution to journalReviewResearchpeer-review

  38. Published

    Deformation of phospholipid vesicles in an optical stretcher

    Delabre, U., Feld, K., Crespo, E., Whyte, G., Sykes, C., Seifert, U. & Guck, J., 1 Feb 2015, In: Soft Matter. 11, 30, p. 6075-6088

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    The influence of flow, shear stress and adhesion molecule targeting on gold nanoparticle uptake in human endothelial cells

    Klingberg, H., Loft, Steffen, Oddershede, L. B. & Møller, Peter, 1 Feb 2015, In: Nanoscale. 7, 26, p. 11409-11419

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Uptake of gold nanoparticles in primary human endothelial cells

    Klingberg, H., Oddershede, L. B., Loeschner, K., Larsen, E. H., Loft, Steffen & Møller, Peter, 1 Feb 2015, In: Toxicology Research. 4, 3, p. 655-666

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Comparison of the Photothermal Efficiency of Different Types of Plasmonic Nanoparticles in vitro and in vivo

    Nørregaard, K., Jørgensen, Jesper Tranekjær, Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 171a

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Helical Buckling in Filopodia

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 27 Jan 2015, In: Biophysical Journal. 108, 2,Suppl 1, p. 139a-139a

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Membrane Curvature Regulates the Localization of G Protein Coupled Receptors and Ras Isoforms

    Stamou, Dimitrios, Rosholm, K. R., Damalas, A., Hatzakis, Nikos, Wirth, V. F., Martinez, Karen Laurence, Leijnse, Natascha, Oddershede, L. B., Bendix, Poul Martin & Pedersen, S. L., 27 Jan 2015, In: Biophysical Journal. 108, 2, p. 95a-96a

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Permeability and Fluid Flow: Presentation at the Phoenix Consortium’s Symposium on Imaging Porous Media and Fluid Flow,

    Misztal, M. K. & Mathiesen, Joachim, 10 Jan 2015, Copenhagen, Denmark

    Research output: Other contributionResearch

  45. Published

    Protein reconstitution into freestanding planar lipid membranes for electrophysiological characterization

    Gutsmann, T., Heimburg, Thomas Rainer, Keyser, U., Mahendran, K. R. & Winterhalter, M., 10 Jan 2015, In: Nature Protocols (Print). 10, 1, p. 188-198

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Unstructured Lattice Boltzmann methods for efficient simulation of flow in complex porous media: EGU General Assembly 2015

    Mathiesen, Joachim, Misztal, M. K., Matin, R. & Hernandez, A., 1 Jan 2015, In: Geophysical Research Abstracts. 17, 5669.

    Research output: Contribution to journalConference articleResearchpeer-review

  47. Published

    Cytoskeletal dynamics

    Bendix, Poul Martin, 2015, Cambridge, Massachusetts, USA

    Research output: Other contributionResearch

  48. Published

    Detailed analysis of the lattice Boltzmann method on unstructured grids

    Misztal, M. K., Hernandez Garcia, A., Matin, R., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Journal of Computational Physics. 297, p. 316-339

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Digital signaling decouples activation probability and population heterogeneity

    Kellogg, R. A., Tian, C., Lipniacki, T., Quake, S. R. & Tay, S., 2015, In: eLife. 4, e08931.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published
  51. Published

    Emergent user behavior on Twitter modelled by a stochastic differential equation

    Møllgaard, A. E. & Mathiesen, Joachim, 2015, In: P L o S One. 10, 5, e0123876.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Enforced Scale Selection in Field Theories of Mechanical and Biological Systems

    Tarp, J. M., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 50 p.

    Research output: Book/ReportPh.D. thesisResearch

  53. Published

    Helical buckling of actin inside filopodia generates traction

    Leijnse, Natascha, Oddershede, L. B. & Bendix, Poul Martin, 2015, In: Proceedings of the National Academy of Sciences USA (PNAS). 112, 1, p. 136-141

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Interferometric detection of single gold nanoparticles calibrated against TEM size distributions

    Zhang, L., Christensen, S., Bendix, Poul Martin, Bhatia, V. K., Loft, Steffen & Stamou, Dimitrios, 2015, In: Small. 11, 29, p. 3550-3555 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published
  56. Published

    Membrane dynamics

    Bendix, Poul Martin, 2015

    Research output: Other contributionResearch

  57. Published

    Membrane fusion

    Bendix, Poul Martin, 2015, California, USA

    Research output: Other contributionResearch

  58. Published

    Optical properties of nanoparticles

    Bendix, Poul Martin, 2015, København, Danmark

    Research output: Other contributionResearch

  59. Published

    Photodiode Based Detection for Multiple Trap Optical Tweezers

    Ott, D., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 164 p.

    Research output: Book/ReportPh.D. thesisResearch

  60. Published

    Physics Based Investigations of DNA Supercoiling and of Plasmonic Nanoparticles for Photothermal Cancer Therapy

    Nørregaard, K., 2015, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/ReportPh.D. thesisResearch

  61. Published

    Rotation-limited growth of three-dimensional body-centered-cubic crystals

    Tarp, J. M. & Mathiesen, Joachim, 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 1, 012409.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Simulating anomalous dispersion in porous media using the unstructured lattice Boltzmann method

    Misztal, M. K., Hernandez Garcia, A., Matin, R., Müter, D., Jha, D., Sørensen, H. O. & Mathiesen, Joachim, 2015, In: Frontiers in Physics. 3, 9 p., 50.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    Structure of a functional amyloid protein subunit computed using sequence variation

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    What does evolution tell us about the structure of a functional amyloid protein?

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  65. Published

    Why do bacteria regulate public goods by quorum sensing?-How the shapes of cost and benefit functions determine the form of optimal regulation

    Heilmann, Silja, Krishna, S. & Kerr, B., 2015, In: Frontiers in Microbiology. 6, p. 767

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. 2014
  67. Published

    Intermittent dislocation density fluctuations in crystal plasticity from a phase-field crystal model

    Tarp, J. M., Angheluta, L., Mathiesen, Joachim & Goldenfeld, N., 31 Dec 2014, In: Physical Review Letters. 113, 26, 265503.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Long-range ordered vorticity patterns in living tissue induced by cell division

    Rossen, Ninna Struck, Tarp, J. M., Mathiesen, Joachim, Jensen, Mogens Høgh & Oddershede, L. B., 8 Dec 2014, In: Nature Communications. 5, 5720.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    A kinetic mechanism for cell sorting based on local variations in cell motility

    Strandkvist, C., Juul, J., Baum, B., Kabla, A. J. & Duke, T., 6 Dec 2014, In: Interface Focus. 4, 6, 20140013.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome

    Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Fluorescent quantification of size and lamellarity of membrane nanotubes

    Farhangibarooji, Younes, Oddershede, L. B., Seyyed Reihani, S. N. & Bendix, Poul Martin, 2 Dec 2014, In: European Biophysics Journal. 43, 12, p. 595-602

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    A detection system for an optical manipulation system for manipulating micro-particls or nano-particles of a sample by means of at least two optical traps

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 Dec 2014, Patent No. 70097, 1 Dec 2014

    Research output: Patent

  73. Published

    Nanoscale Phase Behavior on Flat and Curved Membranes

    Andersen, T., Bahadori, Azra, Ott, D., Kyrsting, A. H., Seyyed Reihani, S. N. & Bendix, Poul Martin, 28 Nov 2014, In: Nanotechnology. 25, 50, 505101.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Dynamics of the DNA repair proteins WRN and BLM in the nucleoplasm and nucleoli

    Bendtsen, K. M., Jensen, M. B., May, A., Rasmussen, Lene Juel, Trusina, Ala, Bohr, Vilhelm & Jensen, Mogens Høgh, 14 Nov 2014, In: European Biophysics Journal. 43, 10-11, p. 509-516

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Multi-neuronal activity and functional connectivity in cell assemblies

    Roudi, Y., Dunn, B. & Hertz, John, 8 Nov 2014, In: Current Opinion in Neurobiology. 32, p. 38-44

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Phage and bacteria support mutual diversity in a narrowing staircase of coexistence

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 3 Nov 2014, In: I S M E Journal. 28, 11, p. 2317-2326

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Local and transient permeation events are associated with local melting of giant liposomes

    Andersen, T., Kyrsting, A. H. & Bendix, Poul Martin, 2 Nov 2014, In: Soft Matter. 10, 24, p. 4268-4274

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Dynamic operation of optical fibres beyond the single-mode regime facilitates the orientation of biological cells

    Kreysing, M., Ott, D., Schmidberger, M. J., Otto, O., Schuermann, M., Martin-Badosa, E., Whyte, G. & Guck, J., 1 Nov 2014, In: Nature Communications. 5, 5481.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Models of life: Dynamics and regulation in biological systems

    Sneppen, Kim, 5 Oct 2014, Cambridge University Press ed. Cambridge. 342 p.

    Research output: Book/ReportBookResearchpeer-review

  80. Published

    L-1 regularization for reconstruction of a non-equilibrium Ising model

    Zeng, H. L., Hertz, John & Roudi, Y., 2 Oct 2014, In: Physica Scripta. Topical Issues. 89, 10, 105002.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Published

    Deep inspiration breath hold radiotherapy of lung cancer: The good, the bad and the ugly case

    Josipovic, Mirjana, Aznar, M. C. & Persson, Gitte F., 1 Oct 2014, In: Acta Oncologica. 53, 10, p. 1446-+

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Injectable Colloidal Gold in a Sucrose Acetate Isobutyrate Gelating Matrix with Potential Use in Radiation Therapy

    Jolck, R. I., Binderup, Tina, Hansen, A. E., Scherman, J. B., Munck af Rosenschöld, P. M., Kjær, Andreas & Andresen, T. L., 1 Oct 2014, In: Advanced Healthcare Materials. 3, 10, p. 1680-1687

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Motion management during IMAT treatment of mobile lung tumors-A comparison of MLC tracking and gated delivery

    Falk, M., Pommer, T., Keall, P., Korreman, S., Persson, Gitte F., Poulsen, P. & Munck af Rosenschöld, P. M., 1 Oct 2014, In: Medical Physics. 41, 10, 101707.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Published

    Simultaneous three-dimensional tracking of individual signals from multi-trap optical tweezers using fast and accurate photodiode detection

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 22 Sep 2014, In: Optics Express. 22, 19, p. 23661-23672

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    Penetration of Action Potentials During Collision in the Median and Lateral Giant Axons of Invertebrates

    Gonzalez-Perez, Alfredo, Budvytyte, R., Mosgaard, L. D., Nissen, S. & Heimburg, Thomas Rainer, 10 Sep 2014, In: Physical Review X. 4, 3, 031047.

    Research output: Contribution to journalJournal articleResearchpeer-review

  86. Published

    Statistics of co-occurring keywords in confined text messages on Twitter

    Mathiesen, Joachim, Angheluta, L. & Jensen, Mogens Høgh, 1 Sep 2014, In: European Physical Journal. Special Topics. 223, 9, p. 1849-1858 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Tethered particle analysis of supercoiled circular DNA using peptide nucleic acid handles

    Norregaard, K., Andersson, M., Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., Sep 2014, In: Nature Protocols (Print). 9, 9, p. 2206-23 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Model Study of the Pressure Build-Up during Subcutaneous Injection

    Thomsen, M., Hernandez Garcia, A., Mathiesen, Joachim, Poulsen, Mette Homann, Sørensen, D., Tarnow, L. & Feidenhans'l, Robert Krarup, 14 Aug 2014, In: PLoS ONE. 9, 8, e104054.

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. Published

    A treatment planning and delivery comparison of volumetric modulated arc therapy with or without flattening filter for gliomas, brain metastases, prostate, head/neck and early stage lung cancer

    Gasic, D., Ohlhues, L., Brodin, N. P., Fog, L. S., Pommer, T., Bangsgaard, J. P. & Munck af Rosenschöld, P. M., 1 Aug 2014, In: Acta Oncologica. 53, 8, p. 1005-1011

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Non-Steady Wall-Bounded Flows of Viscoelastic Fluids Under Periodic Forcing

    Hernandez-Garcia, A., Fernandez Barbero, A. & Sotolongo-Costa, O., 1 Aug 2014, In: Brazilian Journal of Physics. 44, 4, p. 315-325

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    Saturation of Shape Instabilities in Single Bubble Sonoluminescence Saturation

    Levinsen, Mogens, 29 Jul 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 90, 1, 013026.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    The Strength of Friendship Ties in Proximity Sensor Data

    Sekara, V. & Jørgensen, S. L., 7 Jul 2014, In: P L o S One. 9, 7

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Enabling accurate photodiode detection of multiple optical traps by spatial filtering: Optical Trapping and Optical Micromanipulation XI

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 16 Jun 2014, In: Proceedings of S P I E - International Society for Optical Engineering. 9164, p. 916411- 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Jamming Transition in Kinetically Constrained Models with Reflection Symmetry

    Ohta, H. & sasa, S., 1 Jun 2014, In: Journal of Statistical Physics. 155, 5, p. 827-842

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Optical Trapping of Nanoparticles and Quantum Dots

    Bendix, Poul Martin, Jauffred, Liselotte, Nørregaard, K. & Oddershede, L. B., 1 Jun 2014, In: IEEE Journal of Selected Topics in Quantum Electronics. 20, 3, 4800112.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Recurrences after intensity modulated radiotherapy for head and neck squamous cell carcinoma more likely to originate from regions with high baseline [18F]-FDG uptake

    Due, A. K., Vogelius, Ivan R. , Aznar, M. C., Bentzen, S. M., Berthelsen, A. K., Korreman, S. S., Loft, A., Kristensen, C. A. & Specht, Lena, 1 Jun 2014, In: Radiotherapy & Oncology. 111, 3, p. 360-365

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Mutations in Transcriptional Regulators Allow Selective Engineering of Signal Integration Logic

    Semsey, S., 25 May 2014, In: mBio (Print). 5, 3, e01171.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    The Thermodynamics of General and Local Anesthesia

    Graesboll, K., Sasse-Middelhoff, H. & Heimburg, Thomas Rainer, 20 May 2014, In: Biophysical Journal. 106, 10, p. 2143-2156

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Speciation, diversification, and coexistence of sessile species that compete for space

    Mitarai, Namiko, Heinsalu, E. & Sneppen, Kim, 12 May 2014, In: PloS One. 9, 5, p. e96665

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    Sub-diffraction positioning of a two-photon excited and optically trapped quantum dot

    Jauffred, Liselotte, Kyrsting, A. H., Christensen, E. A., Seyyed Reihani, S. N. & Oddershede, L. B., 6 May 2014, In: Nanoscale. 6, 12, p. 6997-7003

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Crosstalk elimination in the detection of dual-beam optical tweezers by spatial filtering

    Ott, D., Seyyed Reihani, S. N. & Oddershede, L. B., 1 May 2014, In: Review of Scientific Instruments. 85, 5, 053108.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. Published

    Comment on Y. Couder and E. Fort: Single-Particle Diffraction and Interference at a Macroscopic Scale; Phys. Rev. Lett. 97, 154101 (2006)

    Andersen, A., Madsen, J., Reichelt, C., Ahl, S. R., Lautrup, B. E., Ellegaard, Clive Sigurd, Levinsen, Mogens & Bohr, T., 4 Apr 2014, In: arXiv.org: Physics. 1405.0466v1

    Research output: Contribution to journalJournal articleResearch

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