- 2016
- Published
Fundamental structures of dynamic social networks
Sekara, V., stopczynski, A. & Lehmann, S., 6 Sep 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 36, p. 9977-9982 6 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Polymersomes mimic biofilms fractal growth
Gonzalez-Perez, Alfredo, Feld, K. & Ruso, J. M., 1 Sep 2016, In: Journal of Polymer Research. 23, 9, 195.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Solitary electromechanical pulses in lobster neurons
Gonzalez-Perez, Alfredo, Mosgaard, L. D., Budvytyte, R., Villagran-Vargas, E., Jackson, Andrew D. & Heimburg, Thomas Rainer, Sep 2016, In: Biophysical Chemistry. 216, p. 51-59Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intensification of convective extremes driven by cloud–cloud interaction
Moseley, C., Hohenegger, C., Berg, P. & Härter, Jan Olaf Mirko, 29 Aug 2016, In: Nature Geoscience. 9, 10, p. 748-752Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Controlled Cellular fusion using optically trapped Plasmonic Nano-Heaters
Bahadori, Azra, Rørvig-Lund, A., Semsey, S., Oddershede, L. B. & Bendix, Poul Martin, 28 Aug 2016, In: Proceedings of the SPIE. 9922Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Evolution of a G protein-coupled receptor response by mutations in regulatory network interactions
Di Roberto, R. B., Chang, B., Trusina, Ala & Peisajovich, S. G., 4 Aug 2016, In: Nature Communications. 7, 12344.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fast intra-fractional image-guidance with 6D positioning correction reduces delivery uncertainty for stereotactic radiosurgery and radiotherapy
Tarnavski, N., Engelholm, S. A. & Munck af Rosenschöld, P. M., 2 Aug 2016, In: Journal of Radiosurgery and SBRT. 4, 1, p. 15-20Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A two-fluid model for vertical flow applied to CO2 injection wells
Linga, G. & Lund, H., 1 Aug 2016, In: International Journal of Greenhouse Gas Control. 51, p. 71-80 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Non-invasive detection of animal nerve impulses with an atomic magnetometer operating near quantum limited sensitivity
Jensen, K., Budvytyte, R., Thomas, Rodrigo A., Wang, T., Fuchs, A. M., Balabas, M. V., Vasilakis, G., Mosgaard, L. D., Stærkind, Hans, Müller, Jörg Helge, Heimburg, Thomas Rainer, Olesen, Søren-Peter & Polzik, Eugene Simon, 15 Jul 2016, In: Scientific Reports. 6, 29638.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asymmetric Damage Segregation Constitutes an Emergent Population-Level Stress Response
Vedel, S., Nunns, H., Košmrlj, A., Semsey, S. & Trusina, Ala, 13 Jul 2016, In: Cell Systems. 3, 2, p. 187-198Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases
Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleosome dynamics and maintenance of epigenetic states of CpG islands
Sneppen, Kim & Dodd, I. B., 28 Jun 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 6, 062417.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA methylation in human epigenomes depends on local topology of CpG sites
Lövkvist, Cecilia, Dodd, I. B., Sneppen, Kim & Härter, Jan Olaf Mirko, 20 Jun 2016, In: Nucleic Acids Research. 44, 11, p. 5123-5132Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measure of node similarity in multilayer networks
Møllgaard, A. E., Zettler, Ingo, Dammeyer, Jesper, Jensen, Mogens Høgh, Lehmann, S. & Mathiesen, Joachim, 14 Jun 2016, In: PLOS ONE. 11, 6, 0157436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bifurcation of transition paths induced by coupled bistable systems
Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simulation-based study of micron scale, binary flows in porous rocks
Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, 6 Jun 2016, CMG 2016: 31st IUGG Conference on Mathematical Geophysics, Paris. Geo-Physics, from Mathematics to Experiments. Paris, FranceResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Study of Transitional Flows in Rough Walls Channel Flows
Hernandez Garcia, A., Matin, R., Misztal, M. K. & Mathiesen, Joachim, 6 Jun 2016, CMG 2016: 31st IUGG Conference on Mathematical Geophysics, Paris. Geo-Physics, from Mathematics to Experiments. Paris, FranceResearch output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- Published
Bioinspired Materials for Water Purification
Gonzalez-Perez, Alfredo & Persson, K. M., Jun 2016, In: Materials Transactions. 9, 6, 447.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nanog, Oct4 and Tet1 interplay in establishing pluripotency
Olariu, V., Lövkvist, Cecilia & Sneppen, Kim, 5 May 2016, In: Scientific Reports. 6, 25438.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Dynamics of Initiative in Communication Networks
Mollgaard, A. & Mathiesen, Joachim, 28 Apr 2016, In: PLOS ONE. 11, 4, e0154442.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diffusion retardation by binding of tobramycin in an alginate biofilm model
Cao, B., Christophersen, L., Kolpen, Mette, Jensen, Peter Østrup, Sneppen, Kim, Høiby, Niels, Moser, Claus Ernst & Sams, T., 21 Apr 2016, In: P L o S One. 11, 4, 11 p., e0153616.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage lambda and Escherichia coli
Mitarai, Namiko, Brown, Stanley & Sneppen, Kim, 11 Apr 2016, In: Journal of Bacteriology. 198, 12, p. 1783-1793Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A dosimetric comparison of real-time adaptive and non-adaptive radiotherapy: A multi-institutional study encompassing robotic, gimbaled, multileaf collimator and couch tracking
Colvill, E., Booth, J., Nill, S., Fast, M., Bedford, J., Oelfke, U., Nakamura, M., Poulsen, P., Worm, E., Hansen, R., Ravkilde, T., Rydhog, J. S., Pommer, T., Munck af Rosenschöld, P. M., Lang, S., Guckenberger, M., Groh, C., Herrmann, C., Verellen, D., Poels, K. & 5 others, , 1 Apr 2016, In: Radiotherapy & Oncology. 119, 1, p. 159-165Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three is much more than two in coarsening dynamics of cyclic competitions
Mitarai, Namiko, Gunnarson, I., Pedersen, B. N., Rosiek, C. A. & Sneppen, Kim, Apr 2016, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 93, 042408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Optical quantification of forces at play during stem cell differentiation
Ritter, C., Brickman, Joshua Mark & Oddershede, L. B., 4 Mar 2016, In: Proceedings of S P I E - International Society for Optical Engineering. 9764, UNSP 97640J.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Short-range growth inhibitory signals from the epithelium can drive non-stereotypic branching in the pancreas
Dahl-Jensen, Svend Bertel, Figueiredo-Larsen, E. M., Botton, A. & Sneppen, Kim, 23 Feb 2016, In: Physical Biology. 13, 1, 016007.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Food Web Assembly Rules for Generalized Lotka-Volterra Equations
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, Feb 2016, In: PLoS Computational Biology. 12, 2, e1004727.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Injectable silver nanosensors: in vivo dosimetry for external beam radiotherapy using positron emission tomography
Christensen, A. N., Rydhög, J. S., Søndergaard, R. V., Andresen, T. L., Holm, S., Munck af Rosenschöld, P. M., Conradsen, K. & Jølck, R. I., 8 Jan 2016, In: Nanoscale. 8, 21, p. 11002-11011Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Monte Carlo study of the early steps of functional amyloid formation
Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A cross-immunization model for the extinction of old influenza strains
Uekermann, F. & Sneppen, Kim, 2016, In: Scientific Reports. 6, 8 p., 25907.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics of membrane nanotubes coated with I-BAR
Farhangibarooji, Younes, Rørvig-Lund, A., Semsey, S., S. Reihani, S. N. & Bendix, Poul Martin, 2016, In: Scientific Reports. 6, 30054.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
From Pore Scale to Turbulent Flow with the Unstructured Lattice Boltzmann Method
Matin, R., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Fusion of Selected Cells and Vesicles Mediated by Optically Trapped Plasmonic Nanoparticles
Bahadori, Azra, 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 161 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Human T cell responses to Japanese encephalitis virus in health and disease
Turtle, L., Bali, T., Buxton, G., Chib, S., Chan, S., Soni, M., Hussain, M., Isenman, H., Fadnis, P., Venkataswamy, M. M., Satishkumar, V., Lewthwaite, P., Kurioka, A., Krishna, S., Shankar, M. V., Ahmed, R., Begum, A., Ravi, V., Desai, A., Yoksan, S. & 7 others, , 2016, In: Journal of Experimental Medicine.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inflammation: Modelling function and failure of the innate immune system
Holst-Hansen, T., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Information Spreading in Epidemics and in Communication Networks
Uekermann, F. P., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Mathematical models of human behavior
Møllgaard, A. E., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Nucleation and spreading of a heterochromatic domain in fission yeast
Obersriebnig, M. J., Pallesen, E. M. H., Sneppen, Kim, Trusina, Ala & Thon, Genevieve, 2016, In: Nature Communications. 7, 11 p., 11518.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Numerical simulations and mathematical models of flows in complex geometries: From laminar to turbulent regimes
Hernandez Garcia, A., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
On polarization in biomembranes
Zecchi, K. A., 2016, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Reduction of Cheddar cheese ripening time through the addition of glucose
Møller, C. O. D. A., Czárán, T. L., Christensen, B. B., Siegumfeldt, Henrik & Rattray, F. P., 2016.Research output: Contribution to conference › Poster › Research
- Published
Scale selection in columnar jointing: insights from experiments on cooling stearic acid and numerical simulations
Christensen, A., Raufaste, C., Misztal, M. K., Celestini, F., Guidi, M., Ellegaard, Clive Sigurd & Mathiesen, Joachim, 2016, In: Journal of Geophysical Research: Solid Earth. 121, 3, p. 1462-1482 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single Particle and PET-based Platform for Identifying Optimal Plasmonic Nano-Heaters for Photothermal Cancer Therapy
Jørgensen, Jesper Tranekjær, Nørregaard, K., Tian, P., Bendix, Poul Martin, Kjær, Andreas & Oddershede, L. B., 2016, In: Scientific Reports. 6, 10 p., 30076.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stabilization of epigenetic states of CpG islands by local cooperation
Sormani, G., Härter, Jan Olaf Mirko, Lövkvist, Cecilia & Sneppen, Kim, 2016, In: Molecular BioSystems. 12, 7, p. 2142-2146Research output: Contribution to journal › Journal article › Research › peer-review
- Published
tN-Ras, Synaptotagmin1 C2Ab, Annexinb12 and Amphiphysin NBAR can Discriminate Spherical from Cylindrical Membrane Curvature
kpl171, kpl171, Larsen, J., Rosholm, K. R., Pedersenb, S. L., Munch, H. K., Tkach, Vadym, Sakon, J. J., Bjornholm, T., Weninger, K. R., Bendix, Poul Martin, Jensen, Knud Jørgen, Uline, M. J., Hatzakis, Nikos & Stamou, Dimitrios, 2016, In: Biophysical Journal. 110, 3, 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- 2015
- Published
Disparate metabolic response to fructose feeding between different mouse strains
Montgomery, M. K., Fiveash, C. E., Braude, J. P., Osborne, Brenna, Brown, Stanley, Mitchell, T. W. & Turner, N., 22 Dec 2015, In: Scientific Reports. 5, 18474.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Effect of the Nonlinearity of the Response of Lipid Membranes to Voltage Perturbations on the Interpretation of Their Electrical Properties. A New Theoretical Description
Mosgaard, L. D., Zecchi, K. A., Heimburg, Thomas Rainer & Budvytyte, R., Dec 2015, In: Membranes. 5, 4, p. 495-512Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Schelling model of cell segregation based only on local information
Nielsen, Alexander Valentin, Gade, A. L., Juul, J. & Strandkvist, C., 4 Nov 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 5, 052705.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evaluation of the Unstructured Lattice Boltzmann Method in Porous Flow Simulations
Misztal, M. K., Matin, R., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Simulating Anomalous Dispersion and Multiphase Segregation in Porous Media with the Lattice Boltzmann Method
Matin, R., Misztal, M. K., Hernandez Garcia, A. & Mathiesen, Joachim, Nov 2015.Research output: Contribution to conference › Conference abstract for conference › Research
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes
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Directed percolation and puff jamming near the transition to pipe turbulence
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Stochastic microbial dispersal drives local extinction and global diversity
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Different receptor models show differences in ligand binding strength and location: a computational drug screening for the tick-borne encephalitis virus
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