Biocomplexity

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  1. 2020
  2. Published

    Dynamics of bacterial populations under the feast-famine cycles

    Himeoka, Y. & Mitarai, Namiko, 27 Mar 2020, In: Physical Review Research. 2, 1, 15 p., 013372.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Chaos in disease outbreaks among prey

    Eilersen, Andreas Thomas, Jensen, Mogens Høgh & Sneppen, Kim, 3 Mar 2020, In: Scientific Reports. 10, 7 p., 3907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Modelling value bubbles in an attention based economy

    Toftdahl Olesen, C. & Sneppen, Kim, 2 Mar 2020, In: European Physical Journal B. 93, 3, 5 p., 36.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Polar jets of swimming bacteria condensed by a patterned liquid crystal

    Turiv, T., Koizumi, R., Thijssen, K., Genkin, M. M., Yu, H., Peng, C., Wei, Q., Yeomans, J. M., Aranson, I. S., Doostmohammadi, Amin & Lavrentovich, O. D., 2 Mar 2020, In: Nature Physics. 16, 4, p. 481-487 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Active nematics with anisotropic friction: the decisive role of the flow aligning parameter

    Thijssen, K., Metselaar, L., Yeomans, J. M. & Doostmohammadi, Amin, 28 Feb 2020, In: Soft Matter. 16, 8, p. 2065-2074 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Active matter in a viscoelastic environment

    Plan, E. L. C. V. M., Yeomans, J. M. & Doostmohammadi, Amin, 24 Feb 2020, In: Physical Review Fluids. 5, 2, 15 p., 023102.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Activity Induced Nematic Order in Isotropic Liquid Crystals

    Santhosh, S., Nejad, M. R., Doostmohammadi, Amin, Yeomans, J. M. & Thampi, S. P., 12 Feb 2020, In: Journal of Statistical Physics. 180, 1-6, p. 699-709 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    How pirate phage interferes with helper phage: Comparison of the two distinct strategies

    Mitarai, Namiko, 7 Feb 2020, In: Journal of Theoretical Biology. 486, 9 p., 110096.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Unge forskere: Ph.d.-studerende skal ikke udnyttes som billig arbejdskraft

    Vallgårda, Karen Asta Arnfred, Sørensen, Thomas Just, Jauffred, Liselotte, Danbolt, Mathias, Bjørk, R., Dalsgaard, P., Dimke, H., Niss, K. & Pedersen, B. P., 30 Jan 2020, In: Altinget. 1 p.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  11. Published

    Optical trapping reveals differences in dielectric and optical properties of copper nanoparticles compared to their oxides and ferrites

    Purohit, P., Samadi, A., Bendix, Poul Martin, Laserna, J. J. & Oddershede, L. B., 27 Jan 2020, In: Scientific Reports. 10, 1, 10 p., 1198.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Epigenetic Ratchet: Spontaneous Adaptation via Stochastic Gene Expression

    Himeoka, Y. & Kaneko, K., 16 Jan 2020, In: Scientific Reports. 10, 1, 7 p., 459.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Unge forskere: Høj risikovillighed i forskningsfinansieringen er nødvendigt

    Bjørk, R., Dalsgaard, P., Dimke, H., Engberg-Pedersen, Anders, Jauffred, Liselotte, Kropp, K., Niss, K., Pedersen, B. P. & Sørensen, Thomas Just, 16 Jan 2020, København : Altinget.dk.

    Research output: Other contribution › Communication

  14. Published

    Det Unge Akademi: Ny stillingsstruktur på universiteterne har flere faldgruber

    Jauffred, Liselotte, 13 Jan 2020, København : Altinget.dk.

    Research output: Other contribution › Communication

  15. Published

    Model to Link Cell Shape and Polarity with Organogenesis

    Nielsen, Bjarke Frost, Nissen, Silas Boye, Sneppen, Kim, Mathiesen, Joachim & Trusina, Ala, 10 Jan 2020, In: iScience. 23, 2, p. 1-10 10 p., 100830.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Dynamics and stability in prebiotic information integration: an RNA World model from first principles

    Szilagyi, A., Konnyu, B. & Czaran, T., 9 Jan 2020, In: Scientific Reports. 10, 1, 11 p., 51.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Annexins in Plasma Membrane Repair

    Florentsen, C. D., 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 218 p.

    Research output: Book/Report › Ph.D. thesis › Research

  18. Published

    Engagement and disengagement components of attentional bias to emotional stimuli in anxiety and depression

    Blicher, A., Reinholdt-Dunne, M. L., Hvenegaard, M., Winding, C., Petersen, Anders & Vangkilde, Signe, 2020, In: Journal of Experimental Psychopathology. 11, 3, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    How Membrane Geometry Regulates Protein Sorting Independently of Mean Curvature

    Larsen, J. B., Rosholm, K. R., Kennard, C., Pedersen, S. L., Munch, H. K., Tkach, Vadym, Sakon, J. J., Bjornholm, T., Weninger, K. R., Bendix, Poul Martin, Jensen, Knud Jørgen, Hatzakis, Nikos, Uline, M. J. & Stamou, Dimitrios, 2020, In: ACS Central Science. 6, 7, p. 1159-1168 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Kronik: Risikobaseret genåbning af Danmark kan give færre alvorligt syge og en hurtigere genåbning

    Kirkeby, Carsten, Græsbøll, K., Halasa, T., Sneppen, Kim & Christiansen, L. E., 2020, In: Ingenøren.dk.

    Research output: Contribution to journal › Journal article › Communication

  21. Published

    Point Particles to Capture Polarized Embryonic Cells & Cold Pools in the Atmosphere

    Nissen, Silas Boye, 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 319 p.

    Research output: Book/Report › Ph.D. thesis › Research

  22. Published

    Spatial determinants of viral infections

    Eriksen, R. S., 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 205 p.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    Stochastic Bacterial Growth and Survival

    Svenningsen, Mikkel Skjoldan, 2020, Niels Bohr Institute, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/Report › Ph.D. thesis › Research

  24. Published

    Sustainability of spatially distributed bacteria-phage systems

    Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 2020, In: Scientific Reports. 10, 1, p. 1-12 3154.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Tanker i lockdown

    Andersen, C. (ed.), Jauffred, Liselotte (ed.), Laustsen, A. H. (ed.), Levisen, C. (ed.), Lomborg, Stine (ed.) & Pristed, B. B. (ed.), 2020, Det Kongelige Danske Videnskabernes Selskab. 180 p.

    Research output: Book/Report › Anthology › Communication

  26. Published

    Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing

    Gummesson, Bertil, Shah, S. A., Borum, A. S., Fessler, M., Mitarai, Namiko, Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2020, In: Frontiers in Genetics. 11, 17 p., 144.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. 2019
  28. Published

    Inferring Leading Interactions in the p53/Mdm2/Mdmx Circuit through Live-Cell Imaging and Modeling

    Heltberg, Mathias Spliid, Chen, S., Jimenez, A., Jambhekar, A., Jensen, Mogens Høgh & Lahav, G., 18 Dec 2019, In: Cell Systems. 9, 6, p. 548-558.e5

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Tracking the Gust Fronts of Convective Cold Pools

    Fournier, M. B. & Härter, Jan Olaf Mirko, 7 Nov 2019, In: Journal of Geophysical Research - Atmospheres. 124, 11, p. 11103-11117

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Regime Shifts in a Phage-Bacterium Ecosystem and Strategies for Its Control

    Maslov, S. & Sneppen, Kim, 1 Nov 2019, In: mSystems. 5, 4(6), e00470-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Self-assembly, buckling and density-invariant growth of three-dimensional vascular networks

    Kirkegaard, Julius Bier, Nielsen, Bjarke Frost, Trusina, Ala & Sneppen, Kim, 31 Oct 2019, In: Journal of the Royal Society. Interface. 16, 159, 8 p., 20190517.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Effects and side effects of plasmonic photothermal therapy in brain tissue

    He, Yue, Laugesen, K., Kamp, D., Sultan, S. A., Oddershede, L. B. & Jauffred, Liselotte, 24 Oct 2019, In: Cancer Nanotechnology. 10, 1, 11 p., UNSP 8.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Locked body clocks

    Heltberg, Mathias Spliid & Jensen, Mogens Høgh, Oct 2019, In: Nature Physics. 15, 10, p. 989-990

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  34. Published

    MR-based CT metal artifact reduction for head-and-neck photon, electron, and proton radiotherapy

    Nielsen, J. S., Van Leemput, K. & Edmund, J. M., Oct 2019, In: Medical Physics. 46, 10, p. 4314-4323

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Melting transitions in biomembranes

    Muzic, T., Tounsi, F., Madsen, S. B., Pollakowski, D., Konrad, M. & Heimburg, Thomas Rainer, 26 Sep 2019, In: B B A - Biomembranes. 1861, 11, 11 p., 183026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Effect of local thermoplasmonic heating on biological membranes

    Moreno Pescador, Guillermo Sergio, Qoqaj, I., Thusgaard Ruhoff, Victoria, Iversen, J., Nylandsted, J. & Bendix, Poul Martin, 9 Sep 2019, In: Proceedings of S P I E - International Society for Optical Engineering. 11083, 19 p., 110830M.

    Research output: Contribution to journal › Conference article › Research › peer-review

  37. Published

    Constraints on somite formation in developing embryos

    Juul, J. S., Jensen, Mogens Høgh & Krishna, S., 4 Sep 2019, In: Journal of the Royal Society. Interface. 16, 158, 9 p., 20190451.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Quantification of protein dynamics in nanotubes pulled from transfected cell-derived vesicles

    Moreno Pescador, Guillermo Sergio, Florentsen, C., Østbye, H., Sønder, S. L., Boye, T. L., Veje, E. L., Semsey, S., Nylandsted, J., Daniels, R. & Bendix, Poul Martin, 20 Jul 2019, In: European Biophysics Journal. 48, Suppl. 1, p. S159-S159

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  39. Published

    Plasmonic Heating of Nanostructures

    Jauffred, Liselotte, Samadi, A., Klingberg, H., Bendix, Poul Martin & Oddershede, L. B., 10 Jul 2019, In: Chemical Reviews. 119, 13, p. 8087-8130

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Fractionated photothermal therapy in a murine tumor model: comparison with single dose

    Simón, M., Nørregaard, K., Jørgensen, Jesper Tranekjær, Oddershede, L. B. & Kjær, Andreas, Jul 2019, In: International Journal of Nanomedicine. 14, p. 5369—5379

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Circling in on Convective Organization

    Härter, Jan Olaf Mirko, Böing, S. J., Henneberg, O. C. & Nissen, Silas Boye, 21 Jun 2019, In: Geophysical Research Letters. 46, p. 1-11 11 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  42. Published

    Backscattering-based detection scheme for dark-field optical tweezers

    Samadi, A., Mousavi, S. M., Hajizadeh, F. & Reihani, S. N. S., 1 Jun 2019, In: Journal of the Optical Society of America B: Optical Physics. 36, 6, p. 1587-1593

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Curvature- and Phase-Induced Protein Sorting Quantified in Transfected Cell-Derived Giant Vesicles

    Moreno Pescador, Guillermo Sergio, Florentsen, C. D., Østbye, H., Sønder, S. L., Boye, T. L., Veje, E. L., Sonne, A. K., Semsey, S., Nylandsted, J., Daniels, R. & Bendix, Poul Martin, Jun 2019, In: ACS Nano. 13, 6, p. 6689-6701

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Theoretical analysis of Polycomb-Trithorax systems predicts that poised chromatin is bistable and not bivalent

    Sneppen, Kim & Ringrose, L., 13 May 2019, In: Nature Communications. 10, 18 p., 2133.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Gender bias in Nobel prizes

    Lunnemann, P., Jensen, Mogens Høgh & Jauffred, Liselotte, 7 May 2019, In: Humanities and social sciences communications. 5, 4 p., 46.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The dosimetric effect of residual breath-hold motion in pencil beam scanned proton therapy - An experimental study

    Gorgisyan, J., Lomax, A. J., af Rosenschold, P. M., Persson, Gitte F., Krieger, M., Colvill, E., Scherman, J., Gagnon-Moisan, F., Egloff, M., Fattori, G., Engelholm, S. A., Weber, D. C. & Perrin, R., May 2019, In: Radiotherapy and Oncology. 134, p. 135-142

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Convective Self-Aggregation As a Cold Pool-Driven Critical Phenomenon

    Härter, Jan Olaf Mirko, 16 Apr 2019, In: Geophysical Research Letters. 46, 7, p. 4017-4028 12 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  48. Published

    Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells

    Svenningsen, Mikkel Skjoldan, Veress, A., Harms, A., Mitarai, Namiko & Semsey, S., 15 Apr 2019, In: Scientific Reports. 9, 13 p., 6056.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    The fitness cost and benefit of phase-separated protein deposits

    Sanchez de Groot, N., Torrent Burgas, M., Ravarani, C. N. J., Trusina, Ala, Ventura, S. & Babu, M. M., Apr 2019, In: Molecular Systems Biology. 15, 4, e8075.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Calcium electroporation and electrochemotherapy for cancer treatment: Importance of cell membrane composition investigated by lipidomics, calorimetry and in vitro efficacy

    Hoejholt, K. L., Muzic, T., Jensen, S. D., Dalgaard, L. T., Bilgin, M., Nylandsted, J., Heimburg, Thomas Rainer, Frandsen, S. K. & Gehl, Julie, 18 Mar 2019, In: Scientific Reports. 9, 12 p., 4758.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Bernaise: A Flexible Framework for Simulating Two-Phase Electrohydrodynamic Flows in Complex Domains

    Linga, G., Bolet, A. & Mathiesen, Joachim, 4 Mar 2019, In: Frontiers in Physics. 7, 21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Optical control of strongly absorbing nanoparticles and their potential for photothermal treatment

    Samadi, A., Jauffred, Liselotte, Klingberg, H., Bendix, Poul Martin & Oddershede, L. B., 1 Mar 2019, In: Proceedings of SPIE. 10935, 109351A.

    Research output: Contribution to journal › Conference article › Research › peer-review

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