Biocomplexity

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  1. 2017
  2. Published

    18F-FDG PET/CT-based early treatment response evaluation of nanoparticle-assisted photothermal cancer therapy

    Norregaard, K., Jørgensen, Jesper Tranekjær, Simon, M., Melander, F., Kristensen, L. K., Bendix, Poul Martin, Andresen, T. L., Oddershede, L. B. & Kjær, Andreas, 24 May 2017, In: PLOS ONE. 12, 5, e0177997.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements

    Hao, N., Sneppen, Kim, Shearwin, K. E. & Dodd, I. B., 19 May 2017, In: Nucleic Acids Research. 45, 9, p. 5074-5085

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Optically controlled and selective fusion of cells and vesicles using plasmonic nano-heaters

    Bahadori, Azra, Oddershede, L. B. & Bendix, Poul Martin, 19 May 2017, Light Robotics - Structure-mediated Nanobiophotonics. Glückstad, J. & Palima, D. (eds.). Elsevier, 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  5. Published

    Membrane curvature regulates ligand-specific membrane sorting of GPCRs in living cells

    Rosholm, K. R., Leijnse, Natascha, Mantsiou, A., Tkach, Vadym, Pedersen, S. L., Wirth, V. F., Oddershede, L. B., Jensen, Knud Jørgen, Martinez, Karen Laurence, Hatzakis, Nikos, Bendix, Poul Martin, Callan-Jones, A. & Stamou, Dimitrios, 8 May 2017, In: Nature Chemical Biology. 13, 7, p. 724-729

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Time Correlations in Mode Hopping of Coupled Oscillators

    Heltberg, Mathias Spliid, Krishna, S. & Jensen, Mogens Høgh, 2 May 2017, In: Journal of Statistical Physics. 167, 3-4, p. 792-805

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Reply to "Comment on 'Penetration of Action Potentials During Collision in the Median and Lateral Giant Axons of Invertebrates'"

    Wang, T., Gonzalez-Perez, Alfredo, Budvytyte, R., Jackson, Andrew D. & Heimburg, Thomas Rainer, 24 Apr 2017, In: Physical Review X. 7, 2, 028002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Optical manipulation of hot nanoparticles can mediate selected cell fusion

    Oddershede, L. B., Bahadori, Azra & Bendix, Poul Martin, 18 Apr 2017, In: Proceedings of SPIE. 10252, 1025207.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Chirality in microbial biofilms is mediated by close interactions between the cell surface and the substratum

    Jauffred, Liselotte, Vejborg, R. M., Korolev, K. S., Brown, Stanley & Oddershede, L. B., 14 Apr 2017, In: I S M E Journal. 11, 7, p. 1688-1701

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Noise-induced polarization switching in complex networks

    Härter, Jan Olaf Mirko, Díaz-Guilera, A. & Ángeles Serrano, M., 11 Apr 2017, In: Physical Review E. 95, 042305.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Different reprogramming propensities in plants and mammals: Are small variations in the core network wirings responsible?

    Olariu, V., Nilsson, J., Jonsson, H. & Peterson, C., 6 Apr 2017, In: PLOS ONE. 12, 4, e0175251.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The memory remains: Understanding collective memory in the digital age

    Garcia-Gavilanes, R., Mollgaard, A., Tsvetkova, M. & Yasseri, T., 5 Apr 2017, In: Science Advances. 3, 4, e1602368.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Cellular Decision Making by Non-Integrative Processing of TLR Inputs

    Kellogg, R. A., Tian, C., Etzrodt, M. & Tay, S., 4 Apr 2017, In: Cell Reports. 19, 1, p. 125-135

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Using Optically Manipulated Metallic Nanoparticles for Cancer Treatment

    Nørregaard, K., Jørgensen, Jesper Tranekjær, Kjær, Andreas, Samadi, A., Bendix, Poul Martin & Oddershede, L. B., 2 Apr 2017, Optical Trapping Applications 2017: Optical Manipulation Applications III (OtTu2E). San Diego, California, USA: Optical Society of America, OtTuE.4

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  15. Published

    Models of life: epigenetics, diversity and cycles

    Sneppen, Kim, 1 Apr 2017, In: Reports on Progress in Physics. 80, 4, 042601.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Deterministic extinction by mixing in cyclically competing species

    Feldager, C. W., Mitarai, Namiko & Ohta, H., 20 Mar 2017, In: Physical Review E. 95, 3, 032318.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Quantifying Force and Viscoelasticity Inside Living Cells Using an Active-Passive Calibrated Optical Trap

    Ritter, C. M., Mas, J., Oddershede, L. & Berg-Sørensen, K., 20 Mar 2017, In: Methods in molecular biology (Clifton, N.J.). 1486, p. 513-536 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    A Dilemma for Empirical Realism: Metaphysical Realism or Instrumentalism

    Jaksland, Rasmus, 15 Mar 2017, In: Philosophia. 45, 3, p. 1195-1205

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The physics of organoids: a biophysical approach to understanding organogenesis

    Dahl-Jensen, Svend Bertel & Grapin-Botton, A., 15 Mar 2017, In: Development (Cambridge, England). 144, 6, p. 946-951 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Occlusion of the ribosome binding site connects the translational initiation frequency, mRNA stability and premature transcription termination

    Eriksen, M., Sneppen, Kim, Pedersen, Steen & Mitarai, Namiko, 14 Mar 2017, In: Frontiers in Microbiology. 8, 7 p., 362.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Characterization of phase transitions in a model ecosystem of sessile species

    Uekermann, F., Mathiesen, Joachim & Mitarai, Namiko, 13 Mar 2017, In: Physical Review E. 95, 3, 032409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Dynamics of cancerous tissue correlates with invasiveness

    West, A. V., Wullkopf, L., Christensen, A., Leijnse, Natascha, Tarp, J. M., Mathiesen, Joachim, Erler, Janine & Oddershede, L. B., 6 Mar 2017, In: Scientific Reports. 7, 43800.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Self-similar distributions of fluid velocity and stress heterogeneity in a dissolving porous limestone

    Linga, G., Mathiesen, Joachim & Renard, F., Mar 2017, In: Journal of Geophysical Research: Biogeosciences. 122, 3, p. 1726-1743

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Tuning of Recombinant Protein Expression in Escherichia coli by Manipulating Transcription, Translation Initiation Rates, and Incorporation of Noncanonical Amino Acids

    Schlesinger, O., Chemla, Y., Heltberg, Mathias Spliid, Ozer, E., Marshal, R., Noireaux, V., Jensen, Mogens Høgh & Alfonta, L., 23 Feb 2017, In: A C S Synthetic Biology. 6, 6, p. 1076-1085

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Multi-scale spatio-temporal analysis of human mobility

    Alessandretti, L., Sapiezynski, P., Lehmann, S. & Baronchelli, A., 15 Feb 2017, In: PLOS ONE. 12, 2, e0171686.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity

    Perni, M., Galvagnion, C., Maltsev, A., Meisl, G., Müller, M. B. D., Challa, P. K., Kirkegaard, J. B., Flagmeier, P., Cohen, S. I. A., Cascella, R., Chen, S. W., Limbocker, R., Sormanni, P., Heller, G. T., Aprile, F. A., Cremades, N., Cecchi, C., Chiti, F., Nollen, E. A. A., Knowles, T. P. J. & 4 others, Vendruscolo, M., Bax, A., Zasloff, M. & Dobson, C. M., 7 Feb 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 6, p. E1009-E1017

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Division Induced Dynamics in Non-Invasive and Invasive Breast Cancer

    West, A. V., Wullkopf, L., Christensen, A., Leijnse, Natascha, Tarp, J. M., Mathiesen, Joachim, Erler, Janine & Oddershede, L. B., 3 Feb 2017, In: Biophysical Journal. 112, 3, Supp. 1, p. 123A-123A

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Manipulation and Motion of Organelles and Single Molecules in Living Cells

    Norregaard, K., Metzler, R., Ritter, C. M., Berg-Sørensen, K. & Oddershede, L. B., 3 Feb 2017, In: Chemical Reviews. 117, 5, p. 4342-4375

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Adhesion ability of angiotensin II with model membranes

    Preu, J., Tiefenauer, L. & Gutberlet, T., 1 Feb 2017, In: B B A - Biomembranes. 1859, 2, p. 195-200

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Path integral methods for the dynamics of stochastic and disordered systems

    Hertz, John, Roudi, Y. & Sollich, P., 20 Jan 2017, In: Journal of Physics A: Mathematical and Theoretical. 50, 3, 46 p., 033001.

    Research output: Contribution to journal › Review › Research › peer-review

  31. Published

    SensibleSleep: A Bayesian Model for Learning Sleep Patterns from Smartphone Events

    Cuttone, A., Baekgaard, P., Sekara, V., Jonsson, H., Larsen, J. E. & Lehmann, S., 11 Jan 2017, In: PLOS ONE. 12, 1, e0669901.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Whole-GUV patch-clamping

    Garten, M., Mosgaard, L. D., Bornschloegl, T., Dieudonne, S., Bassereau, P. & Toombes, G. E. S., 10 Jan 2017, In: Proceedings of the National Academy of Sciences USA (PNAS). 114, 2, p. 328-333

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Population cycles and species diversity in dynamic Kill-the-Winner model of microbial ecosystems

    Maslov, S. & Sneppen, Kim, 4 Jan 2017, In: Scientific Reports. 7, 39642.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Mechano-capacitive properties of polarized membranes and the application to conductance measurements of lipid membrane patches

    Zecchi, K. A., Mosgaard, L. D. & Heimburg, Thomas Rainer, 1 Jan 2017, In: Journal of Physics: Conference Series. 780, 012001.

    Research output: Contribution to journal › Conference article › Research › peer-review

  35. Published

    A numerical strategy for finite element modeling of frictionless asymmetric vocal fold collision

    Granados, A., Misztal, M. K., Brunskog, J., Visseq, V. & Erleben, Kenny, 2017, In: International Journal for Numerical Methods in Biomedical Engineering. 33, 2, 25 p., e02793.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Decision Making in Biological Systems

    Tian, C., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen. 188 p.

    Research output: Book/Report › Ph.D. thesis › Research

  37. Published

    Ecology and evolution in the RNA world dynamics and stability of prebiotic replicator systems

    Szilágyi, A., Zachar, I., Scheuring, I., Könnyű, B. & Czárán, T., 2017, In: Life. 7, 4, 48.

    Research output: Contribution to journal › Review › Research › peer-review

  38. Published

    Modeling spatiotemporal dynamics of DNA methylation

    Lövkvist, Cecilia, 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  39. Published

    Stress-driven pattern formation in living and non-living matter

    Christensen, A., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  40. Published

    Studies on the Action Potential From a Thermodynamic Perspective

    Wang, T., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  41. Published

    Using data-and network science to reveal iterations and phase-transitions in the design process

    Piccolo, S., Jørgensen, Sune Lehmann & Maier, A., 2017, In: Proceedings of the International Conference on Engineering Design, ICED. 2, DS87-2, p. 11-20 10 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  42. Published

    Viscoelastic and dynamic properties of embryonic stem cells

    Ritter, C., 2017, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  43. 2016
  44. Published

    Noise Induces Hopping between NF-kappa B Entrainment Modes

    Heltberg, Mathias Spliid, Kellogg, R. A., Krishna, S., Tay, S. & Jensen, Mogens Høgh, 21 Dec 2016, In: Cell Systems. 3, 6, p. 521-531

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Publication bias and the canonization of false facts

    Nissen, Silas Boye, Magidson, T., Gross, K. & Bergstrom, C. T., 20 Dec 2016, In: eLife. 5, p. 1-19 19 p., e21451.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    SuperSegger: Robust image segmentation, analysis and lineage tracking of bacterial cells

    Stylianidou, S., Brennan, C., Nissen, Silas Boye, Kuwada, N. J. & Wiggins, P. A., 11 Nov 2016, In: Molecular Microbiology. 102, 4, p. 690-700 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Expert Game experiment predicts emergence of trust in professional communication networks

    Bendtsen, K. M., Uekermann, F. & Härter, Jan Olaf Mirko, 25 Oct 2016, In: Proceedings of the National Academy of Sciences USA (PNAS). 113, 43, p. 12099-12104

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Fundamental structures of dynamic social networks

    Sekara, V., stopczynski, A. & Lehmann, S., 6 Sep 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 36, p. 9977-9982 6 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  49. Published

    Polymersomes mimic biofilms fractal growth

    Gonzalez-Perez, Alfredo, Feld, K. & Ruso, J. M., 1 Sep 2016, In: Journal of Polymer Research. 23, 9, 195.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Solitary electromechanical pulses in lobster neurons

    Gonzalez-Perez, Alfredo, Mosgaard, L. D., Budvytyte, R., Villagran-Vargas, E., Jackson, Andrew D. & Heimburg, Thomas Rainer, Sep 2016, In: Biophysical Chemistry. 216, p. 51-59

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Intensification of convective extremes driven by cloud–cloud interaction

    Moseley, C., Hohenegger, C., Berg, P. & Härter, Jan Olaf Mirko, 29 Aug 2016, In: Nature Geoscience. 9, 10, p. 748-752

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Controlled Cellular fusion using optically trapped Plasmonic Nano-Heaters

    Bahadori, Azra, Rørvig-Lund, A., Semsey, S., Oddershede, L. B. & Bendix, Poul Martin, 28 Aug 2016, In: Proceedings of the SPIE. 9922

    Research output: Contribution to journal › Conference article › Research › peer-review

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