Biocomplexity

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  1. 2008
  2. Published

    Amplitude equation and long-rang interactions in underwater sand ripples in one dimension

    Schnipper, T., Mertens, K., Ellegaard, Clive Sigurd & Bohr, T., 1 Oct 2008, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 78, 4, 047301.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Quantitative optical trapping of single gold nanorods

    Selhuber-Unkel, C., Zins, I., Schubert, O., Soennichsen, C. & Oddershede, L. B., 2008, In: Nano Letters. 8, 9, p. 2998-3003

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Ultrasensitive gene regulation by positive feedback loops in nucleosome modification

    Sneppen, Kim, Micheelsen, M. A. & Dodd, I. B., 15 Apr 2008, In: Molecular Systems Biology. 4, p. 182

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Oscillations and temporal signalling in cells

    Tiana, G., Krishna, S., Pigolotti, S., Jensen, Mogens Høgh & Sneppen, Kim, 2008, In: Physical Biology. 4, 2, p. R1-R17

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Rationalizing translation attenuation in the network architecture of the unfolded protein response

    Trusina, Ala, Papa, F. R. & Tang, C., 23 Dec 2008, In: Proceedings of the National Academy of Sciences USA (PNAS). 105, 51, p. 20280-20285

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Translation attenuation mechanism in unfolded protein response

    Trusina, Ala, Papa, F. & Tang, C., 1 Dec 2008, Evolution from Cellular to Social Scales. Skjeltorp, A., Skjeltorp, A. & Belushkin, A. (eds.). p. 83-90 8 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  8. 2009
  9. Published

    Fragmentation of fullerences, chapter in Hanbook of Nanophysics

    Albert, V. V., Chancey, R. T., Oddershede, L. B., Harris, F. E. & Sabin, J. R., 2009, Handbook of Nanophysics. Taylor & Francis

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  10. Published

    Towards a thermodynamic theory of nerve pulse propagation

    Andersen, S. S., Jackson, Andrew D. & Heimburg, Thomas Rainer, 2009, In: Progress in Neurobiology. 88, 2, p. 104-113 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Microenvironment driven invasion: a multiscale multimodel investigation

    Anderson, A. R. A., Rejniak, K. A., Gerlee, P. D. M. & Quaranta, V., 2009, In: Journal of Mathematical Biology. 58, 4-5, p. 579-624 45 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Thermodynamics and roughening of solid-solid interfaces

    Angheluta, L., Jettestuen, E. & Mathiesen, Joachim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 3, Part 1, p. 031601

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Dynamics of growth: decisions in phages & gene segregation in bacteria

    Avlund, M., 2009, Niels Bohr Institute: Museum Tusculanum. 129 p.

    Research output: Book/Report › Ph.D. thesis › Research

  14. Published

    Minimal Gene Regulatory Circuits that Can Count like Bacteriophage Lambda

    Avlund, M., Dodd, I. B., Sneppen, Kim & Krishna, S., 11 Dec 2009, In: Journal of Molecular Biology. 394, 4, p. 681-693

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Why do phage play dice?

    Avlund, M., Dodd, I. B., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: Journal of Virology. 83, 22, p. 11416-11420 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Quantification of nano-scale intermembrane contact areas using fluorescence resonance energy transfer

    Bendix, Poul Martin, Pedersen, M. S. & Stamou, Dimitrios, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 30, p. 12341-12346 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The temperature dependence of lipid membrane permeability, its quantized nature, and the influence of anesthetics

    Blicher, A., Wodzinska, K., Fidorra, M., Winterhalter, M. & Heimburg, Thomas Rainer, 2009, In: Biophysical Journal. 96, 11, p. 4581-4591 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Drying patterns: sensitivity to residual stresses

    Cohen, Y., Procaccia, I. & Mathiesen, Joachim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 4, Part 2, p. 046109

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Nanotoxikologie-es gibt immer zwei Seiten "review about nanotoxicology as an emerging field of research, indcludes interviews with Willie Peijnenburg, Priska Hinz, and Jens Otte

    Czerwinski, F., 2009, In: Junge Wissenschaft. 83

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Quantifying and pinpointing sources of noise in optical tweezers experiments

    Czerwinski, F., Richardson, A. C., Selhuber-Unkel, C. & Oddershede, L. B., 2009, Proceedings of SPIE, vol.7400, San Diego: Optical Trapping and Optical Micromanipulation VI. SPIE - International Society for Optical Engineering, Vol. 7400. p. 740004-740009 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Quantifying noise in optical tweezers by Allan Variance

    Czerwinski, F., Richardson, A. C. & Oddershede, L. B., 2009, In: Optics Express. 17, 15, p. 13255-13269 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Vesicles in electric fields: some novel aspects of membrane behavior

    Dimova, R., Bezlyepkina, N. & Domange Jordö, M. E., 2009, In: Soft Matter. 5, 17, p. 3201-3212 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Oral manifestations among people living with HIV/AIDS in Tanzania

    Fabian, F. M., Kahabuka, F. K., Petersen, P. E., Shubi, F. M. & Jürgensen, N., 2009, In: International Dental Journal. 59, 4, p. 187-91 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Direct visualization of the lateral structure of porcine brain cerebrosides/POPC mixtures in presence and absence of cholesterol

    Fidorra, M., Heimburg, Thomas Rainer & Bagatolli, L. A., 2009, In: Biophysical Journal. 97, 1, p. 142-154 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Melting of individual lipid components in binary lipid mixtures studied by FTIR spectroscopy. DSC and Monte Carlo simulations

    Fidorra, M., Heimburg, Thomas Rainer & Seeger, H. M., 2009, In: Biochimica et Biophysica Acta - Biomembranes. 1788, 3, p. 600-607 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Heat distribution function for motion in a general potential at low temperature

    Fogedby, H. C. & Imparato, A., 2009, In: Journal of Physics A: Mathematical and Theoretical (Print Edition). 42, 47, p. 475004

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Minimum action method for the Kardar-Parisi-Zhang equation

    Fogedby, H. C. & Ren, W., 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 80, 4, Part 1, p. 041116

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Evolution of cell motility in an individual-based model of tumour growth

    Gerlee, P. D. M. & Anderson, A. R. A., 2009, In: Journal of Theoretical Biology. 259, 1, p. 67-83 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Gene divergence and pathway duplication in the metabolic network of yeast and digital organisms

    Gerlee, P. D. M., Lundh, T., Zhang, B. & Anderson, A. R. A., 2009, In: Journal of the Royal Society Interface. 6, 41, p. 1233-1245 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Modelling evolutionary cell behaviour using neural networks: application to tumour growth

    Gerlee, P. D. M. & Anderson, A. R. A., 2009, In: BioSystems. 95, 2, p. 166-174 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Pathway identification by network pruning in the metabolic network of Escherichia coli

    Gerlee, P. D. M., Lizana, G. L. & Sneppen, Kim, 2009, In: Bioinformatics. 25, 24, p. 3282-3288 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Biomimetic triblock copolymer membrane arrays: A stable template for functional membrane proteins

    Gonzalez-Perez, Alfredo, Stibius, K. B., Vissing, T., Nielsen, Claus Henrik & Mouritsen, Ole G., 15 Sep 2009, In: Langmuir. 25, 18, p. 10447-10450 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Diffusion and Partitioning of Fluorescent Lipid Probes in Phospholipid Monolayers

    Gudmand, M., Fidorra, M., Bjørnholm, T. & Heimburg, Thomas Rainer, 2009, In: Biophysical Journal. 96, 11, p. 4598-4609 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Die physik von nerven

    Heimburg, Thomas Rainer, 2009, In: Physik Journal (Print). 8, p. 33-39 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Physical properties of biological membranes. Chapter for "Encyclopedia of Applied Biophysics"

    Heimburg, Thomas Rainer, 2009, Wiley. 593 p.

    Research output: Book/Report › Book › Research

  36. Published

    Themed issue: membrane biophysics

    Heimburg, Thomas Rainer, 2009, In: Soft Matter. 5, 17, p. 3145-3147 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Modeling of the genetic switch of bacteriophage TP901-1: a heteromer of CI and MOR ensures robust bistability

    Hiizu, N., Pedersen, M., Alsing, A. & Sneppen, Kim, 2009, In: Journal of Molecular Biology. 394, p. 15-28 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    A spatial model of tumor-host interaction: application of chemotherapy

    Hinow, P., Gerlee, P. D. M., McCawley, L. J. & Quaranta, V., 2009, In: Mathematical Biosciences and Engineering. 6, 3, p. 521-546 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    A versatile approach to beta-amyloid fibril-binding compounds exploiting the Shirakawa/Hayashi protocol for trans-alkene synthesis

    Huynh, Tri Hien Viet, Mantel, M. L. H., Mikkelsen, K., Lindhardt, A. T., Nielsen, N. C., Otzen, D. & Skrydstrup, T., 19 Feb 2009, In: Organic Letters. 11, 4, p. 999-1002 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Scaling properties of European research units

    Jamtveit, B., Jettestuen, E. & Mathiesen, Joachim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 32, p. 13160-13163 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Repressor lattice: feedback, commensurability, and dynamical frustration

    Jensen, Mogens Høgh, Krishna, S. & Pigolotti, S., 2009, In: Physical Review Letters. 103, 11, p. 118101

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The influence of vesicle size and composition on alpha-synuclein structure and stability

    Kjær, L., Giehm, L., Otzen, D. & Heimburg, Thomas Rainer, 2009, In: Biophysical Journal. 96, 7, p. 2857-2870 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    An active biopolymer network controlled by molecular motors

    Koenderink, G. H., Dogic, Z., Nakamura, F. & Bendix, Poul Martin, 8 Sep 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 36, p. 15192-15197 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Loewner driving functions for off-critical percolation clusters

    Kondo, Y., Mitarai, Namiko & Nakanishi, H., 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 80, 5, Part 1, p. 050102

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Frustrated bistability as a means to engineer oscillations in biological systems

    Krishna, S., Semsey, S. & Jensen, Mogens Høgh, 2009, In: Physical Biology. 6, 3, p. 036009

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Relation of intracellular signal levels and promoter activities in the gal regulon of escherichia coli

    Krishna, S., Orosz, L., Sneppen, Kim, Adhya, S. & Semsey, S., 2009, In: Journal of Molecular Biology. 391, 4, p. 671-678

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Comment on "Citation Statistics" by joint committee on quantitative assessment of research

    Lehmann, S., Lautrup, B. E. & Jackson, Andrew D., 2009, In: Statistical Science. 24, 1, p. 17-20 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Diffusion of finite-sized hard-core ineracting particles in a one-dimensional box: tagged particle dynamics

    Lizana, G. L. & Ambjörnsson, T., 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 80, 5, p. 051103 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Defining Network Topologies that Can Achieve Biochemical Adaptation

    Ma, W., Trusina, Ala, El-Samad, H., Lim, W. A. & Tang, C., 21 Aug 2009, In: Cell. 138, 4, p. 760-773

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Gliomas induce and exploit microglial MT1-MMP expression for tumor expansion

    Markovic, D. S., Vinnakota, K., Chirasani, S., Synowitz, M., Raguet, H., Stock, K., Sliwa, M., Lehmann, S., Kälin, R., van Rooijen, N., Holmbeck, Kenn, Heppner, F. L., Kiwit, J., Matyash, V., Lehnardt, S., Kaminska, B., Glass, R. & Kettenmann, H., 28 Jul 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 30, p. 12530-5 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Toolbox model of evolution of prokaryotic metabolic networks and their regulation

    Maslov, S., Krishna, S., Pang, T. Y. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 24, p. 9743-9748 5 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  52. Published

    Dynamic features of gene expression control by small regulatory RNAs

    Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Simple model for wet granular materials with liquid cluster

    Mitarai, Namiko & Nakanishi, H., 1 Dec 2009, In: EPL. 88, 6, p. 64001

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Quantification of droplet deformation by electromagnetic trapping

    Møller, P. C. F. & Oddershede, L. B., 2009, In: EPL. 88, p. 48005 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Optical tweezers techniques, chapter in Hanndbook of Molecular Biophysics: Methods and Applications

    Oddershede, L. B., 2009, Handbook of Molecular Biophysics. G. Bohr, H. (ed.). Wiley-VCH, p. 195-214 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  56. Published

    Speciation-rate dependence in species-area relationships

    Pigolotti, S. & Cencini, M., 7 Sep 2009, In: Journal of Theoretical Biology. 260, 1, p. 83-89 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Symbolic dynamics of biological feedback networks

    Pigolotti, S., Krishna, S. & Jensen, Mogens Høgh, 2009, In: Physical Review Letters. 102, 8, p. 088701

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Confocal microscopy of thick specimens

    Reihani, S. N. S. & Oddershede, L. B., 2009, In: Journal of Biomedical Optics. 14, 3, p. 030513-030513-3 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Reinforced communication and social navigation generate groups in model networks

    Rosvall, M. & Sneppen, Kim, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 2, Part 2, p. 026111

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Ising model for neural data: Model quality and approximate methods for extracting functional connectivity

    Roudi, Y., Tyrcha, J. & Hertz, John, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 79, 5, p. 051915 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Statistical physics of pairwise probability models

    Roudi, Y., Aurell, E. & Hertz, John, 2009, In: Frontiers in Computational Neuroscience. 3, 22, p. (art 22) 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Effect of antibiotics and antimicrobial peptides on single protein motility

    Ryder, T. W. & Oddershede, L. B., 2009, In: Current Pharmaceutical Biotechnology. 10, 5, p. 486-493 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Effect of energy metabolism and membrane structure on single ¿-receptor motility

    Ryder, T. W., 2009, København: Museum Tusculanum. 101 p.

    Research output: Book/Report › Ph.D. thesis › Research

  64. Published

    Effect of energy metabolism on protein motility in the bacterial outer membrane

    Ryder, T. W., Xu, L., Berg-Sørensen, K., Brown, Stanley & Oddershede, L. B., 2009, In: Biophysical Journal. 97, 5, p. 1305-1312 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Variety in intracellular diffusion during the cell cycle

    Selhuber-Unkel, C., Yde, Pernille, Berg-Sorensen, K. & Oddershede, L. B., Jun 2009, In: Physical Biology. 6, 2, 9 p., 025015.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Variety in intracellular diffusion during the cell cycle

    Selhuber-Unkel, C., Yde, P., Berg-Sørensen, K. & Oddershede, L. B., 2009, In: Physical Biology. 6, 2, p. 025015

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Tracking cell-nanoparticle interactions

    Selhuber-Unkel, C. J. M., 1 Dec 2009, In: Journal of Biomedical Nanotechnology. 5, 6, Sp.Iss. Sl., p. 634-640 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Dominant negative autoregulation limits steady-state repression levels in gene networks

    Semsey, S., Krishna, S., Erdossy, J., Horvath, P., Orosz, L., Sneppen, Kim & Adhya, S., 2009, In: Journal of Bacteriology. 191, 14, p. 4487-4491 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Dynamics of the recovery from sRNA-mediated gene silencing

    Semsey, S., Bemjamin, J., Mitarai, Namiko, Krishna, S., Csiszovszki, Z., Sneppen, Kim & Masse, E., 2009, In: Cell Cycle. 8, 18, p. 2863-2864 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Nonideal behavior of intramolecular structure factor of dilute polymers in a theta solvent

    Shimomura, K., Nakanishi, H. & Mitarai, Namiko, 2009, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 80, 5, Part 1, p. 051804

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Modeling proteasome dynamics in Parkinson's disease

    Sneppen, Kim, Lizana, G. L., Jensen, Mogens Høgh, Pigolotti, S. & Otzen, D., 2009, In: Physical Biology. 6, 3, p. 036005

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Texture of the upper 1000 m in the GRIP and NorthGRIP ice cores

    Svensson, Anders, Durand, G., Mathiesen, Joachim, Persson, A. & Dahl-Jensen, Dorthe, 2009, Low Temperature Science Supplement Issue: Physics of Ice Core Records II. Hondoh, T. (ed.). Institute of Low Temperature Science, Hokkaido University, Sapporo Japan, Vol. 68. p. 107-113 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  73. Published

    Measurement of the spin-forbidden decay rate (3s3d)1D2¿(3s3p)3 P2,1 in 24Mg

    Therkildsen, K. T., Jensen, B. B., Ryder, C. P., Malossi, N. & Thomsen, Jan Westenkær, 2009, In: Physical Review A (Atomic, Molecular and Optical Physics). 79, 3, p. 034501 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Dynamics of uptake and metabolism of small molecules in cellular response systems

    Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: PLoS ONE. 4, 3, p. e4923

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    The thermodynamics of lipid ion channel formation in the absence and presence of anesthetics. BLM experiments and simulations

    Wodzinska, K., Blicher, A. & Heimburg, Thomas Rainer, 2009, In: Soft Matter. 5, 17, p. 3319-3330 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Phase-state dependent current fluctuation in pure lipid membranes

    Wunderlich, B., Leirer, C. & Heimburg, Thomas Rainer, 2009, In: Biophysical Journal. 96, 11, p. 4592-4597 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. 2010
  78. Published

    Functionality and noise in gene regulation qualitative answers from quantitative models & stochastic aspects of gene regulation

    Andersson, A. M. C., 1 Apr 2010, Niels Bohr Institute ed. University of Copenhagen: Museum Tusculanum. 144 p.

    Research output: Book/Report › Ph.D. thesis › Research

  79. Published

    Thermodynamics of stressed solids: Slow deformation and roughening of material interfaces

    Angheluta, L. & Mathiesen, Joachim, 1 Jan 2010, In: European Physical Journal. Special Topics. 178, 1, p. 123-132 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Morphological instabilities of stressed and reactive geological interfaces

    Angheluta, L., Mathiesen, Joachim, Misbah, C. & Renard, F., 24 Jun 2010, In: Journal of Geophysical Research: Biogeosciences. 115, p. B06406 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Minimal gene regulatory circuits for a lysis-lysogeny choice in the presence of noise

    Avlund, M., Krishna, S., Semsey, S., Dodd, I. B. & Sneppen, Kim, 20 Dec 2010, In: PLoS ONE. 5, 12, p. 0015037 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Observation of periodic orbits on curved two-dimensional geometries

    Avlund, M., Ellegaard, Clive Sigurd, Oxborrow, M. & Søndergaard, N., 23 Apr 2010, In: Physical Review Letters. 104, 16, p. 164101 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    An investigation on methods for free-field comparison calibration of measurement microphones

    Barrera Figueroa, S., Moreno Pescador, Guillermo Sergio, Jacobsen, F., Rasmussen, K., Cutanda Henriquez, V. & Juhl, P. M., 2010, Proceedings of Internoise 2010: 39th International Congress and Exposition on Noise Control Engineering - Lisbon, Portugal Duration:,15 Jun 2010 → 16 Jun 2010. Portugal, Lisbon, Vol. 39. p. 1-10 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  84. Published

    Direct measurements of heating by electromagnetically trapped gold nanoparticles on supported lipid bilayers

    Bendix, Poul Martin, Seyyed Reihani, S. N. & Oddershede, L. B., 6 Apr 2010, In: ACS Nano. 4, 4, p. 2256-2262 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    On two-dimensionalization of three-dimensional turbulence in shell models

    Chakraborty, S., Jensen, Mogens Høgh & Sarkar, A., 15 Jan 2010, In: European Physical Journal B. Condensed Matter and Complex Systems. 73, 3, p. 447-453 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Three-dimensional turbulent relative dispersion by the Gledzer-Ohkitani-Yamada shell model

    Chakraborty, S., Jensen, Mogens Høgh & Madsen, B. S., 13 Jan 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 81, 1, p. 017301 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Stop-and-go kinetics in amyloid fibrillation

    Ferkinghoff-Borg, J., Fonslet, J., Andersen, C. B., Krishna, S., Pigolotti, S., Hisashi, Y., Yuji, G., Otzen, D. & Jensen, Mogens Høgh, 1 Jul 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 82, 1, p. 010901(R) 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Active-passive calibration of optical tweezers in viscoelastic media.

    Fischer, M., Richardson, A. C., Seyyed Reihani, S. N., Oddershede, L. B. & Berg-Sørensen, K., 14 Jan 2010, In: Review of Scientific Instruments. 81, 1, p. 015103 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Ion-channel-like behavior in lipid bilayer membranes at the melting transition

    Gallaher, J., Wodzinska, K., Heimburg, Thomas Rainer & Bier, M., 30 Jun 2010, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 81, 6, Part 1, p. 061925 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Diffusion-limited tumour growth: simulations and analysis

    Gerlee, P. D. M. & Anderson, A. R. A., 1 Apr 2010, In: Mathematical Biosciences and Engineering. 7, 2, p. 385-400 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    PRODUCTIVITY AND DIVERSITY IN A CROSS-FEEDING POPULATION OF ARTIFICIAL ORGANISMS

    Gerlee, P. D. M. & Lundh, T., 20 Apr 2010, In: Evolution. 64, 9, p. 2716-2730 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Structural correlations in bacterial metabolic networks

    Gerlee, P. D. M., Bernhardsson, P. J. S., Lizana, G. L. & Sneppen, Kim, 1 Jun 2010, In: FEBS Journal. 277, Suppl. 1, p. 114-114 1 p.

    Research output: Contribution to journal › Journal article › Research

  93. Published

    Influence of Lipid Heterogeneity and Phase Behavior on Phospholipase A(2) Action at the Single Molecule Level

    Gudmand, M. J., Rocha, S., Hatzakis, Nikos, Peneva, K., Müllen , K., Stamou, Dimitrios, Uji-I, H., Hofkens , J., Bjørnholm, T. & Heimburg, Thomas Rainer, 5 May 2010, In: Biophysical Journal. 98, 9, p. 1873-82 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Finding diabetic nephropathy biomarkers in the plasma peptidome by high-throughput magnetic bead processing and MALDI-TOF-MS analysis

    Hansen, H. G., Overgaard, J., Lajer, M., Hubalek, F., Højrup, P., Pedersen, L., Tarnow, L., Rossing, Peter, Pociot, Flemming & McGuire, J. N., 1 Sep 2010, In: Proteomics - Clinical Applications. 4, 8-9, p. 697-705 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Sustainability of Virulence in a Phage-Bacterial Ecosystem

    Heilmann, Silja, Sneppen, Kim & Krishna, S., 1 Mar 2010, In: Journal of Virology. 84, 6, p. 3016-3022 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Contribution about sound pulses in nerves and anesthesia

    Heimburg, Thomas Rainer, 1 May 2010, København

    Research output: Other contribution › Research

  97. Published

    Electromechanical theory of nerve pulses and channel formation

    Heimburg, Thomas Rainer, 5 Feb 2010, Dept. of Chemical Engineering, Spain

    Research output: Other contribution › Research

  98. Published

    Lipid ion channels

    Heimburg, Thomas Rainer, 1 Aug 2010, In: Biophysical Chemistry. 150, 1-3, p. 2-22 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Physics of nerves: the action potential as a propagating density pulse

    Heimburg, Thomas Rainer, 2010, Lyngby, Danmark

    Research output: Other contribution › Research

  100. Published

    The physics of nerves and lipid ion channels

    Heimburg, Thomas Rainer, 2010, Cavendish Laboratory, UK

    Research output: Other contribution › Research

  101. Published

    Cross-correlations in high-conductance states of a model cortical network

    Hertz, John, 1 Feb 2010, In: Neural Computation. 22, 2, p. 427-447 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    Timing of gene transcription in the galactose utilization system of Escherichia coli

    Horvath, P., Hunziker, A., Erdossy, J., Krishna, S. & Semsey, S., 3 Dec 2010, In: Journal of Biological Chemistry. 285, 49, p. 38062-38068 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Genetic flexibility of regulatory networks

    Hunziker, A., Tuboly, C., Horváth, P., Krishna, S. & Semsey, S., 20 Jul 2010, In: Proceedings of the National Academy of Science of the United States of America. 107, 29, p. 12998-13003 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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