Julius Bier Kirkegaard

Julius Bier Kirkegaard

Assistant Professor, Tenure Track Assistant Professor


  1. 2012
  2. Modelling electrolyte conductivity in a water electrolyzer cell

    Caspersen, M. & Kirkegaard, Julius Bier, 2012, In: International Journal of Hydrogen Energy. 37, 9, p. 7436-7441 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2014
  4. Differences in nucleation behavior underlie the contrasting aggregation kinetics of the Aβ40 and Aβ42 peptides.

    Meisl, G., Yang, X., Hellstrand, E., Frohm, B., Kirkegaard, Julius Bier, Cohen, S., Dobson, C., Linse, S. & Knowles, T., Jun 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, p. 9384-9389 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Easyworm: an open-source software tool to determine the mechanical properties of worm-like chains.

    Lamour, G., Kirkegaard, Julius Bier, Li, H., Knowles, T. & Gsponer, J., Jul 2014, In: Source Code for Biology and Medicine. 9, 6 p., 16.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. 2016
  7. Molecular mechanisms of protein aggregation from global fitting of kinetic models.

    Meisl, G., Kirkegaard, Julius Bier, Arosio, P., Michaels, T., Vendruscolo, M., Dobson, C., Linse, S. & Knowles, T., Jan 2016, In: Nature Protocols. 11, p. 252-272 22 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Motility of Colonial Choanoflagellates and the Statistics of Aggregate Random Walkers.

    Kirkegaard, Julius Bier, Marron, A. & Goldstein, R., Jan 2016, In: Physical Review Letters. 116, 6 p., 038102.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Fluctuations in the Kinetics of Linear Protein Self-Assembly.

    Michaels, T., Dear, A., Kirkegaard, Julius Bier, Saar, K., Weitz, D. & Knowles, T., Jun 2016, In: Physical Review Letters. 116, 5 p., 258103.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Aerotaxis in the closest relatives of animals.

    Kirkegaard, Julius Bier, Bouillant, A., Marron, A., Leptos, K. & Goldstein, R., Nov 2016, In: eLife. 5, 16 p., e18109.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Filter-feeding, near-field flows, and the morphologies of colonial choanoflagellates.

    Kirkegaard, Julius Bier & Goldstein, R., Nov 2016, In: Physical Review E. 94, 7 p., 052401.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. 2017
  13. Published

    A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity

    Perni, M., Galvagnion, C., Maltsev, A., Meisl, G., Müller, M. B. D., Challa, P. K., Kirkegaard, J. B., Flagmeier, P., Cohen, S. I. A., Cascella, R., Chen, S. W., Limbocker, R., Sormanni, P., Heller, G. T., Aprile, F. A., Cremades, N., Cecchi, C., Chiti, F., Nollen, E. A. A., Knowles, T. P. J. & 4 others, Vendruscolo, M., Bax, A., Zasloff, M. & Dobson, C. M., 7 Feb 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 6, p. E1009-E1017

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Intra-chain organisation of hydrophobic residues controls inter-chain aggregation rates of amphiphilic polymers.

    Varilly, P., Willard, A., Kirkegaard, Julius Bier, Knowles, T. & Chandler, D., Apr 2017, In: The Journal of Chemical Physics. 146, 5 p., 135102.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. 2018
  16. The role of tumbling frequency and persistence in optimal run-and-tumble chemotaxis

    Kirkegaard, Julius Bier & Goldstein, R. E., Jul 2018, In: IMA Journal of Applied Mathematics. 83, 4, p. 700-719 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Massively parallel C. elegans tracking provides multi-dimensional fingerprints for phenotypic discovery.

    perni, M., challa, P. K., Kirkegaard, Julius Bier, Limbocker, R., Koopman, M., Hardenberg, M. C., Sormanni, P., Müller, T., Saar, K. L., Roode, L. W., Habchi, J., Vecchi, G., Fernando, N., Casford, S., Nollen, E. A., Vendruscolo, M., Dobson, C. & Knowles, T., 27 Jul 2018, In: Apollo - University of Cambridge Repository. 32 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. The noisy basis of morphogenesis: Mechanisms and mechanics of cell sheet folding inferred from developmental variability.

    Haas, P., Höhn, S. S., Honerkamp-Smith, A. R., Kirkegaard, Julius Bier & Goldstein, R., 8 Sep 2018, In: P L o S Biology. e2005536.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. 2019
  20. Multistep Inhibition of α-Synuclein Aggregation and Toxicity in Vitro and in Vivo by Trodusquemine.

    perni, M., Flagmeier, P., Limbocker, R., Cascella, R., Aprile, F. A., Galvagnion, C., Heller, G. T., Meisl, G., Chen, S. W., Kumita, J., challa, P. K., Kirkegaard, J., Cohen, S. IA., Mannini, B., Barbut, D., Nollen, E. AA., Cecchi, C., Casasin, N. C., Knowles, T., Chiti, F. & 3 others, Zasloff, M., Vendruscolo, M. & Dobson, C. M., 18 Jul 2019, In: Apollo - University of Cambridge Repository.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Fluctuations in the Kinetics of Linear Protein Self-Assembly.

    Michaels, T., Dear, A., Kirkegaard, Julius Bier, Saar, K. L., Weitz, D. A. & Knowles, T., 23 Aug 2019, In: Apollo - University of Cambridge Repository. 116, 25, p. 258103-258103 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Self-assembly, buckling and density-invariant growth of three-dimensional vascular networks

    Kirkegaard, Julius Bier, Nielsen, Bjarke Frost, Trusina, Ala & Sneppen, Kim, 31 Oct 2019, In: Journal of the Royal Society. Interface. 16, 159, 8 p., 20190517.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. 2020
  24. Published

    Optimal Transport Flows for Distributed Production Networks

    Kirkegaard, Julius Bier & Sneppen, Kim, 22 May 2020, In: Physical Review Letters. 124, 20, 5 p., 208101.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Airborne Pathogens in a Heterogeneous World: Superspreading & Mitigation

    Kirkegaard, Julius Bier, Mathiesen, Joachim & Sneppen, Kim, 27 Oct 2020, In: medRxiv : the preprint server for health sciences. 9 p.

    Research output: Contribution to journalJournal articleResearch

  26. 2021
  27. Published

    Variability of Individual Infectiousness Derived from Aggregate Statistics of COVID-19

    Kirkegaard, Julius Bier & Sneppen, Kim, 15 Jan 2021, In: medRxiv : the preprint server for health sciences. 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Superspreading of airborne pathogens in a heterogeneous world

    Kirkegaard, Julius Bier, Mathiesen, Joachim & Sneppen, Kim, 27 May 2021, In: Scientific Reports. 11, 1, 9 p., 11191.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Superspreading quantified from bursty epidemic trajectories

    Kirkegaard, Julius Bier & Sneppen, Kim, 16 Dec 2021, In: Scientific Reports. 11, 1, 7 p., 24124.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. 2022
  31. Published

    Cyclic-di-GMP signaling controls metabolic activity in Pseudomonas aeruginosa

    Lichtenberg, Mads, Kragh, K. N., Fritz, Blaine Gabriel, Kirkegaard, Julius Bier, Tolker-Nielsen, Tim & Bjarnsholt, Thomas, 2022, In: Cell Reports. 41, 3, p. 111515 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Transcriptomic Fingerprint of Bacterial Infection in Lower Extremity Ulcers

    Fritz, Blaine Gabriel, Kirkegaard, Julius Bier, Nielsen, C. H., Kirketerp-Møller, K., Malone, M. & Bjarnsholt, Thomas, 2022, In: A P M I S. Acta Pathologica, Microbiologica et Immunologica Scandinavica. 130, 8, p. 524-534

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Simultant: simultaneous curve fitting of functions and differential equations using analytical gradient calculations

    Kirkegaard, Julius Bier, 21 May 2022, In: BMC Bioinformatics. 23, 1, 9 p., 191.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Curvature strains as a global orchestrator of morphogenesis

    Kirkegaard, Julius Bier, 31 May 2022, In: Physical Review Research. 4, 2, 10 p., 023171.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Emerging diversity in a population of evolving intransitive dice

    Kirkegaard, Julius Bier & Sneppen, Kim, 17 Nov 2022, In: Physical Review E. 106, 5, 6 p., 054409.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. 2023
  37. Published

    Fast detection of slender bodies in high density microscopy data

    Alonso, Albert & Kirkegaard, Julius Bier, 2023, In: Communications Biology . 6, 1, 12 p., 754.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Protocol to assess metabolic activity of Pseudomonas aeruginosa by measuring heat flow using isothermal calorimetry

    Beilharz, K., Kragh, K. N., Fritz, Blaine Gabriel, Kirkegaard, Julius Bier, Tolker-Nielsen, Tim, Bjarnsholt, Thomas & Lichtenberg, Mads, 2023, In: STAR Protocols. 4, 2, 102269.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Epigenetic switching with asymmetric bridging interactions

    Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 37768596